BAC Information

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BAC

Clone NameB6Ng01-158P08
Chromosome5 (Build37)
Map Location 64,078,035 - 64,191,482
singlet/doubletdoublet
Overlap gene3110047P20Rik, LOC100042133
Upstream geneCentd1
Downstream gene0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1, Ppia-ps22, LOC433894, LOC100042198
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158P08.bB6Ng01-158P08.g
ACCDH952765DH952766
length611905
definitionDH952765|Mus musculus domesticus DNA, BAC clone: B6Ng01-158P08, 5' end.DH952766|Mus musculus domesticus DNA, BAC clone: B6Ng01-158P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,078,035 - 64,078,644)(64,190,581 - 64,191,482)
sequence
gaattcaattagacagctgttggttaccaatgacctctaagtgccacttc
ttctacctttatgcattacagctcttttatctcgggctcagagatcaaca
tggaagagaggacagaaagatgacagccagaataccagaaagtcggctgt
gagattgtctcttttagaaatgcatgcatagataaaaccagaacaatagc
cattttgttgggatgatagcatggaaggggaaattttagaggtcccaccc
ttgacaaacacacacacacacacacacacacacacacacacacgcaacta
ttaactaatgggaggagaattagcctctctcaggtgtgagaccctaaatc
tccctatgatgaaaaacagtcaaccttgaaaccacagacacataaacaac
aaaaacagattcagcatgttctattttatatatacacaagtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtaacaaatataatcaatgaaaaagaagt
taccaatatcaatttgaaagcagggggatggaagggtttgagggagggta
actgaataggattagagggaggaaaaagaggggtgacatgataataaacc
ttggtcaaata
gaattcatccctgagttttatcagcttctcttgagcttctgggtcacgga
cgattcttgggtctgttccggttatgtccatgtatttccccatctctggg
attttcacgaagcgttcgatgttagcaatctttctgatgtagcaaacaca
cttcttcaggaaggctggagtttgcttgcctagagcaaagtcaaactcat
cctcgatagctggaagaagacaaaacagggttcattgtcttgaacgatgg
aaccatgtgcccaaattcccaatatgcagctcttagttactttgagggac
cttgacttataatttgtagagatgcagcctgtggagtcatttcttaagtt
agcattaggtttttcctaagcatgtagaacctagaagaatagtttttttt
ttcgtaaataattttatttccttcccaatgggaaggaaaagtcgaagacc
agcttgataaggcaagcacgctgggttcatggtgatgagttctaagaggt
aagtttagtttccctctctaactagcttcagtccttttacatgtggaagc
atctgggtctctgtggggccaggaaacatggaggtagctaggtgacatag
ctaggctcctggttccttgccaggtcaccctttccaatgcagtgtcatcc
tttagtttgaggtgtattgtaacctatacaaatgggctgaaatagaaacg
aaaaagcacatgctaaaataaaatataactgtgttctgaattctggtcta
tcttaataattcatgatacttctcaatttaatgggctcagaaaggtatag
aaaatgacttgtataagatatcattttcttctgaactaaaccacatgtct
tatagtacatagagggtgcagagaaagtaagtatgccttgtaagtccctc
cttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_64078035_64078644
seq2: B6Ng01-158P08.b_46_656

seq1  GAATTCAATTAGACAGCTGTTGGTTACCAATGACCTCTAAGTGCCACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAGACAGCTGTTGGTTACCAATGACCTCTAAGTGCCACTTC  50

seq1  TTCTACCTTTATGCATTACAGCTCTTTTATCTCGGGCTCAGAGATCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTTATGCATTACAGCTCTTTTATCTCGGGCTCAGAGATCAACA  100

seq1  TGGAAGAGAGGACAGAAAGATGACAGCCAGAATACCAGAAAGTCGGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGAGGACAGAAAGATGACAGCCAGAATACCAGAAAGTCGGCTGT  150

seq1  GAGATTGTCTCTTTTAGAAATGCATGCATAGATAAAACCAGAACAATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTCTCTTTTAGAAATGCATGCATAGATAAAACCAGAACAATAGC  200

seq1  CATTTTGTTGGGATGATAGCATGGAAGGGGAAATTTTAGAGGTCCCACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTGGGATGATAGCATGGAAGGGGAAATTTTAGAGGTCCCACCC  250

seq1  TTGACAAACACACACACACACACACACACACACACACACACACGCAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAACACACACACACACACACACACACACACACACACACGCAACTA  300

seq1  TTAACTAATGGGAGGAGAATTAGCCTCTCTCAGGTGTGAGACCCTAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTAATGGGAGGAGAATTAGCCTCTCTCAGGTGTGAGACCCTAAATC  350

seq1  TCCCTATGATGAAAAACAGTCAACCTTGAAACCACAGACACATAAACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATGATGAAAAACAGTCAACCTTGAAACCACAGACACATAAACAAC  400

seq1  AAAAACAGATTCAGCATGTTCTATTTTATATATACACAAGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGATTCAGCATGTTCTATTTTATATATACACAAGTGTGTGTGTG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTAACAAATATAATCAATGAAAAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTAACAAATATAATCAATGAAAAAGAAGT  500

seq1  TACCAATATCAATTTGAAAGCAGGGGGATGGAAGGGTTTGAGGGAGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATATCAATTTGAAAGCAGGGGGATGGAAGGGTTTGAGGGAGGGTA  550

seq1  ACTGAAAAGGATTAGAGGGAGGAAAAAGAGGGGTGACATGATAA-AAACC  599
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGAATAGGATTAGAGGGAGGAAAAAGAGGGGTGACATGATAATAAACC  600

seq1  TATTTCAAATA  610
      |   |||||||
seq2  TTGGTCAAATA  611

seq1: chr5_64190581_64191482
seq2: B6Ng01-158P08.g_70_974 (reverse)

seq1  GGAGGGAGGGACTTACAAGGCATACTTAC-TTCTCTGCA-CCTCTATGTA  48
      ||| ||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  GGAAGGAGGGACTTACAAGGCATACTTACTTTCTCTGCACCCTCTATGTA  50

seq1  CTATAAGACATGTGGTTTAGTTCAGAAG-AAATGATATCTTATACAAGTC  97
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTATAAGACATGTGGTTTAGTTCAGAAGAAAATGATATCTTATACAAGTC  100

seq1  ATTTTCTATACCTTTCTGAGCCCATTAAATTGAGAAGTATCATGAATTAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATACCTTTCTGAGCCCATTAAATTGAGAAGTATCATGAATTAT  150

seq1  TAAGATAGACCAGAATTCAGAACACAGTTATATTTTATTTTAGCATGTGC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGACCAGAATTCAGAACACAGTTATATTTTATTTTAGCATGTGC  200

seq1  TTTTTCGTTTCTATTTCAGCCCATTTGTATAGGTTACAATACACCTCAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCGTTTCTATTTCAGCCCATTTGTATAGGTTACAATACACCTCAAA  250

seq1  CTAAAGGATGACACTGCATTGGAAAGGGTGACCTGGCAAGGAACCAGGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGATGACACTGCATTGGAAAGGGTGACCTGGCAAGGAACCAGGAG  300

seq1  CCTAGCTATGTCACCTAGCTACCTCCATGTTTCCTGGCCCCACAGAGACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTATGTCACCTAGCTACCTCCATGTTTCCTGGCCCCACAGAGACC  350

seq1  CAGATGCTTCCACATGTAAAAGGACTGAAGCTAGTTAGAGAGGGAAACTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTTCCACATGTAAAAGGACTGAAGCTAGTTAGAGAGGGAAACTA  400

seq1  AACTTACCTCTTAGAACTCATCACCATGAACCCAGCGTGCTTGCCTTATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACCTCTTAGAACTCATCACCATGAACCCAGCGTGCTTGCCTTATC  450

seq1  AAGCTGGTCTTCGACTTTTCCTTCCCATTGGGAAGGAAATAAAATTATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTCTTCGACTTTTCCTTCCCATTGGGAAGGAAATAAAATTATTT  500

seq1  ACGAAAAAAAAAACTATTCTTCTAGGTTCTACATGCTTAGGAAAAACCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAAAAAAAACTATTCTTCTAGGTTCTACATGCTTAGGAAAAACCTA  550

seq1  ATGCTAACTTAAGAAATGACTCCACAGGCTGCATCTCTACAAATTATAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAACTTAAGAAATGACTCCACAGGCTGCATCTCTACAAATTATAAG  600

seq1  TCAAGGTCCCTCAAAGTAACTAAGAGCTGCATATTGGGAATTTGGGCACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCCCTCAAAGTAACTAAGAGCTGCATATTGGGAATTTGGGCACA  650

seq1  TGGTTCCATCGTTCAAGACAATGAACCCTGTTTTGTCTTCTTCCAGCTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCATCGTTCAAGACAATGAACCCTGTTTTGTCTTCTTCCAGCTAT  700

seq1  CGAGGATGAGTTTGACTTTGCTCTAGGCAAGCAAACTCCAGCCTTCCTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGATGAGTTTGACTTTGCTCTAGGCAAGCAAACTCCAGCCTTCCTGA  750

seq1  AGAAGTGTGTTTGCTACATCAGAAAGATTGCTAACATCGAACGCTTCGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTGTTTGCTACATCAGAAAGATTGCTAACATCGAACGCTTCGTG  800

seq1  AAAATCCCAGAGATGGGGAAATACATGGACATAACCGGAACAGACCCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCCAGAGATGGGGAAATACATGGACATAACCGGAACAGACCCAAG  850

seq1  AATCGTCCGTGACCCAGAAGCTCAAGAGAAGCTGATAAAACTCAGGGATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTCCGTGACCCAGAAGCTCAAGAGAAGCTGATAAAACTCAGGGATG  900

seq1  AATTC  902
      |||||
seq2  AATTC  905