BAC Information

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BAC

Clone NameB6Ng01-159G09
Chromosome5 (Build37)
Map Location 100,380,312 - 100,380,859
singlet/doubletsinglet
Overlap genenone
Upstream genePrkg2, LOC100041680, Rasgef1b, A930011G23Rik, LOC100040738, LOC666364, LOC100040763, LOC100040774
Downstream geneHnrpd, 4930524J08Rik, Hnrpdl, Enoph1, BC062109, LOC666417, Sec31a, LOC100041797, Lin54, Cops4, Plac8, Coq2, Hpse, Hel308, Mrps18c, Ccdc98, A230097K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159G09.bB6Ng01-159G09.g
ACCDH953073DH953074
length1,165542
definitionDH953073|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G09, 5' end.DH953074|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtagatgtggagaaagaggaacactcctccattgttggtg
ggattgcagccttgtacaaccaatctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacagaggaatggatacagaaaatgtggtacatctacacaatggag
tactactcagctattaaaaagaatgaatttacgaaattcctagccaaatg
gatggacctggagggcatcatcctgagtgaggtaacacattcacaaagga
actcacacaatatgtactcactgataagtggatattagcccaaaacctag
gatacccaagatataagatacaatttgctaaacacatgaaactcaagaag
aatgaagactgaagtgtggacactatgcccctccttagaattgggaacaa
aacacccatggaaggagttacagagacaaagtttggagctgagatgaaag
gatggaccatgtagagactgccatatccagggatccaccccataatcagc
atccaaacgctgacaccattgcatacactagcaagattttattgaaagga
cccagatgtagctgtctcttgtgagactatgccggggcctagcaaacaca
gaagtggatgctcacagtcagctaatggatggatcacagggctcccaatg
gagagctagagaaagtagccaggagctaaagggatctgcaccctataggt
ggaacaacattatgaactatcggtacctcggagctcttgactcttagctg
catatgtttcaaagatgctaatcggcatcactgaaaagaggcccattgac
ttgcaactttatatgctcagtacagggactgcaggccaaatgggaatggg
ggggatacgggagtg
tcacttcagatgaaactatggaagacaaggctgtatacgcgtgttaagat
tctcgtttctaaggattttcaaggctaactggggttttgtatgattatca
ataagtagtggcattaattcagtaacccactattaatacgatttagatga
catttactttgtaggaaacatgagtattcagttagtatcagctcctggtg
aggaacaggacatggtgtaacttgtcccgagacacagacagacagcagag
ttgagcttcagtagtataatcccaaggtttgtacttttgaaattttctac
tttttgaaacaagttctcacactgtcagcccaggtttgccctggagaaca
cgatgtaacttagggtagccttgaactcatagaagtcctgcttcagcttc
tggattagagtgcagtccctccgatggtgggattcaggccgtttgcctcg
ctttgagctaggcagttagagatccaccagcctccaactcagacttggcc
cccctgagcttcctgagtgacggggagggggctggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_100380312_100380859
seq2: B6Ng01-159G09.g_70_617 (reverse)

seq1  CCCCCCCCCAGCCCCCTCCCCGTCACTCAGGAAGCTCAGGGGGGCCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCAGCCCCCTCCCCGTCACTCAGGAAGCTCAGGGGGGCCAAGT  50

seq1  CTGAGTTGGAGGCTGGTGGATCTCTAACTGCCTAGCTCAAAGCGAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGGAGGCTGGTGGATCTCTAACTGCCTAGCTCAAAGCGAGGCAA  100

seq1  ACGGCCTGAATCCCACCATCGGAGGGACTGCACTCTAATCCAGAAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCTGAATCCCACCATCGGAGGGACTGCACTCTAATCCAGAAGCTGA  150

seq1  AGCAGGACTTCTATGAGTTCAAGGCTACCCTAAGTTACATCGTGTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGACTTCTATGAGTTCAAGGCTACCCTAAGTTACATCGTGTTCTCC  200

seq1  AGGGCAAACCTGGGCTGACAGTGTGAGAACTTGTTTCAAAAAGTAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAACCTGGGCTGACAGTGTGAGAACTTGTTTCAAAAAGTAGAAAA  250

seq1  TTTCAAAAGTACAAACCTTGGGATTATACTACTGAAGCTCAACTCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAGTACAAACCTTGGGATTATACTACTGAAGCTCAACTCTGCTG  300

seq1  TCTGTCTGTGTCTCGGGACAAGTTACACCATGTCCTGTTCCTCACCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTGTCTCGGGACAAGTTACACCATGTCCTGTTCCTCACCAGGA  350

seq1  GCTGATACTAACTGAATACTCATGTTTCCTACAAAGTAAATGTCATCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATACTAACTGAATACTCATGTTTCCTACAAAGTAAATGTCATCTAA  400

seq1  ATCGTATTAATAGTGGGTTACTGAATTAATGCCACTACTTATTGATAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTATTAATAGTGGGTTACTGAATTAATGCCACTACTTATTGATAATC  450

seq1  ATACAAAACCCCAGTTAGCCTTGAAAATCCTTAGAAACGAGAATCTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAACCCCAGTTAGCCTTGAAAATCCTTAGAAACGAGAATCTTAAC  500

seq1  ACGCGTATACAGCCTTGTCTTCCATAGTTTCATCTGAAGTGAGAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCGTATACAGCCTTGTCTTCCATAGTTTCATCTGAAGTGAGAATTC  548