BAC Information

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BAC

Clone NameB6Ng01-160B07
Chromosome5 (Build37)
Map Location 9,179,731 - 9,180,774
singlet/doubletsinglet
Overlap genenone
Upstream geneAdam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1
Downstream geneLOC654361, 9330182L06Rik, Grm3, LOC100042768, LOC625446, LOC435832
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160B07.bB6Ng01-160B07.g
ACCDH953551DH953552
length1,1641,143
definitionDH953551|Mus musculus domesticus DNA, BAC clone: B6Ng01-160B07, 5' end.DH953552|Mus musculus domesticus DNA, BAC clone: B6Ng01-160B07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagccaggagctaaagggatctgcaccctata
ggtggagcacattatgagctacagtacccggagctctgactctagctgca
ttattatcagggatggctagtcgccatcactgaagagaggcattgactgc
aactttaattgcccagtacagtaatacagggcaaaagggggatgggtggc
acggggatgagggt
gaattcatcaggaactcttgtgattagattcggatgatgattttggggag
aaagaccacagaggtagagggcctttttcatcacattttaggtgaaggtg
ctctcccacttatgccttgtgggtgttactcttgatcacttggcccaggg
agtttgcttgtgtttccccataatctcccacctcccctttcctgagctct
ttggaagggccatgtttctactcagtctccatttaacaagcagtaagcta
ttctatactttcatccctgagagtggagaatctgtattaattattaggac
ttattctacactggagatttattatttcctgccaattcattaatttactc
acttatttatatcaatgcaaattcacagatgtttattacacacattaggc
tatagtcttttttgttttgttttgtttttcgagacagggtttctctgtgt
agccctggctgtcctggaactcactctgtagaccaggctggccttgaact
cagaaatctgcctgcctctgcctcccaagtgctgggattaaagccgtgtg
ccaccacgccccacaggctatatatagtcttatactacattattttgttt
tcttgcttaaattgttccaggtgtgcaatatattagtacagctgtataat
gaagagatccacacaattttgccttcagattttcgtagttttttaaaacc
ccatcatgccccactgctctgtttactttccctgaatttactgactcacc
tcattttatatcacccaactaaagccagtttctcttctcttctctgctca
ctgattaatgccaatcataaggtagcttacttgggaaaacatgcaagtgc
taagacttaaatagtgcttcaaatatgggaaatactctcagggaagggga
aggagggaacattttttagagatactgcttgccaccattccctggtctat
cacatgtaatattgtacacaccaggtagctgatggaaaccagataagaga
agcaaatctactaatcagttaacatgtctaaggtatgtaatcatgtaaca
gccaaattcttctttctccccaaggaaaattgatgggagattcatgggag
acctctgctagataatagcttaaagctaagtagaaatagtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_9179731_9180774
seq2: B6Ng01-160B07.g_188_1209

seq1  GGTGTTACTCTTGATCACTTGGCCCAGGGAGTTTGCTTGTGTTTCCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTACTCTTGATCACTTGGCCCAGGGAGTTTGCTTGTGTTTCCCCAT  50

seq1  AATCTCCCACCTCCCCTTTCCTGAGCTCTTTGGAAGGGCCATGTTTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCACCTCCCCTTTCCTGAGCTCTTTGGAAGGGCCATGTTTCTAC  100

seq1  TCAGTCTCCATTTAACAAGCAGTAAGCTATTCTATACTTTCATCCCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCCATTTAACAAGCAGTAAGCTATTCTATACTTTCATCCCTGAG  150

seq1  AGTGGAGAATCTGTATTAATTATTAGGACTTATTCTACACTGGAGATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAATCTGTATTAATTATTAGGACTTATTCTACACTGGAGATTTA  200

seq1  TTATTTCCTGCCAATTCATTAATTTACTCACTTATTTATATCAATGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTGCCAATTCATTAATTTACTCACTTATTTATATCAATGCAAA  250

seq1  TTCACAGATGTTTATTACACACATTAGGCTATAGTCTTTTTTGTTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGATGTTTATTACACACATTAGGCTATAGTCTTTTTTGTTTTGTT  300

seq1  TTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACT  350

seq1  CACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGC  400

seq1  CTCCCAAGTGCTGGGATTAAAGCCGTGTGCCACCACGCCCCACAGGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTGCTGGGATTAAAGCCGTGTGCCACCACGCCCCACAGGCTAT  450

seq1  ATATAGTCTTATACTACATTATTTTGTTTTCTTGCTTAAATTGTTCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTCTTATACTACATTATTTTGTTTTCTTGCTTAAATTGTTCCAGG  500

seq1  TGTGCAATATATTAGTACAGCTGTATAATGAAGAGATCCACACAATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAATATATTAGTACAGCTGTATAATGAAGAGATCCACACAATTTTG  550

seq1  CCTTCAGATTTTCGTAGTTTTTTAAAACCCCATCATGCCCCACTGCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGATTTTCGTAGTTTTTTAAAACCCCATCATGCCCCACTGCTCTG  600

seq1  TTTACTTTCCCTGAATTTACTGACTCACCTCATTTTATATCACCCAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTCCCTGAATTTACTGACTCACCTCATTTTATATCACCCAACTA  650

seq1  AAGCCAGTTTCTCTTCTCTTCTCTGCTCACTGATTAATGCCAATCATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGTTTCTCTTCTCTTCTCTGCTCACTGATTAATGCCAATCATAAG  700

seq1  GTAGCTTACTT-GGAAAACATGCAGGTGCTAAGACTTAAATAGTGCTTCA  749
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GTAGCTTACTTGGGAAAACATGCAAGTGCTAAGACTTAAATAGTGCTTCA  750

seq1  AATAT-GGAAATACTCTCAAGGGAAGGGGAAGGAGGGAACATTTTTTAGG  798
      ||||| |||||||||||| |||||||||||||||||||||||||||||| 
seq2  AATATGGGAAATACTCTC-AGGGAAGGGGAAGGAGGGAACATTTTTTAG-  798

seq1  AAGATACTGCTTGCCACCATTCCCTGGTCTATCCACCATGTAATAATTGT  848
       ||||||||||||||||||||||||||||||||   |||||||| |||||
seq2  -AGATACTGCTTGCCACCATTCCCTGGTCTATC--ACATGTAAT-ATTGT  844

seq1  AACACACCAGGTAGCTGATGGAGACACAGTATAAGAGAAAGCAAAATCTA  898
       ||||||||||||||||||||| || ||| ||||||| |||| |||||||
seq2  -ACACACCAGGTAGCTGATGGAAAC-CAG-ATAAGAG-AAGC-AAATCTA  889

seq1  CTAATCAGTTAACAATGGTCTAAGGTATTGTTATTAATGAACAGCCCAAA  948
      ||||||||||||||   |||||||||| ||| || |   ||||| |||||
seq2  CTAATCAGTTAACA--TGTCTAAGGTA-TGTAATCATGTAACAG-CCAAA  935

seq1  TTCTTCTTACATCACCACAGGGATAAAAGTGATGGGAGA-TCAT-GGAGA  996
      ||||||||   || || || ||  |||| |||||||||| |||| |||||
seq2  TTCTTCTT---TCTCCCCAAGG--AAAATTGATGGGAGATTCATGGGAGA  980

seq1  CCTCATGC-AGATAATATAGCTTAAAAGCTAGAGTAAGAAATAGGTGAC  1044
      |||| ||| |||||  ||||||| ||||||| ||| ||||||| |||||
seq2  CCTC-TGCTAGATA--ATAGCTT-AAAGCTA-AGT-AGAAATA-GTGAC  1022