BAC Information

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BAC

Clone NameB6Ng01-163F21
Chromosome5 (Build37)
Map Location 95,057,519 - 95,058,611
singlet/doubletsinglet
Overlap genenone
Upstream geneC87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163F21.bB6Ng01-163F21.g
ACCDH955975DH955976
length1,0831,165
definitionDH955975|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F21, 5' end.DH955976|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtagcattctatctacttatctaatacctaatataaaaaatca
aaaacttcctcttgatagggagctagagtccctgagcactttccttttga
tgtctcttgacctcatcttatccctgatcaggaaaggaacaaaaccgttc
aaaataattaaataaaaatcaaaataataaaaaaaacctgaacaatttct
atagtatagtctttacgcatatcttgatcagagaagagaaagaaacaatg
tacagagggagagaaataagaactaaatataaccttacctatttatgtct
tagggaaatgtctgactgaaacagcattctttgtgtaattgacatatact
aattatcagttataagtacatactaactaaaggcaccaagcttcaatcca
atgttcagaactttgtcttatatcaaaataattgcatatttcatgactat
taagtgtaattataagtggttcatgagaatatatgttgctaacatgtttc
aggaaaaacttgtttctgttcagtttgtggtgtgcaaagtttaaatgcta
acatgtctagctccatgtttctcatttctttttgttttcattaattcatt
tatgtattcactttatcacctgatcacttcctgcctgtcttttcctccca
gttctaccctctgaccttttcatctcatttctttctgccattgtcctcag
caaaggagaggcacacactccccacccctaccaggttccacaccactttg
acacaccacgttgcatcaggactaaatgcatcctcacccactgaagccag
acaagtcagctcatcaaggggaaaaggttccaaaagcagagaacaaagtt
caaaaggagaaaacacccagtctgatttttaggagacccacatttaagac
caagcttcacatctgtgcatatgagtaggaggcctaggtccagacatgca
tgctctttgatcggtagtcagtctgtgtgaactcccaatgggttcacatg
actagtaatgtagtctctctggaatgctggactctgttgtaagctctgat
gaccttagcttatggggacctcgagtggagaac
gaattctcacctgaggaatactgaatggcagagcagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtctgaatggataagatcaaaaactcaggtgacagc
aaatgctggcgaggatgtggagaaagtggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcccgcaatactactcctggtc
atatatccagaagatgtcccaactggttgaagaccacatgctccactatg
ttcatagcagccttgtttataatagccagaagctggaaagaaccaagatg
ctcctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaaatgaattcatgaaattcctaggcaaat
ggatggaactggagggtatcatccagagtgaagtaacccattcacaatgg
aactcgcacaatatgtactcactgataagtggatattagcccaaaaccta
ggatacccaagatataagatacaacttgccaaacacataaaattcaagaa
gaacgaagaccaaagtgtggacactttaccctttcttggaaatgggaaca
aaaaacccatggaaggagttacagagacaaaatttggagctgtgacgaaa
ggatggaccatctagtgattgccatatgcagggatccatcccataatcag
cttccaaatgctgacaccattgcacacactagcaagattttgctgaaagg
acccagatatagctctctcttgtgagactatgccggggcctagcaaacac
agaagtggatggtcacagtcagctattggttgggtcactcggccccatgg
agagctagagaaattactcaagagctaaagggactgcgaccctataggtg
gacacattatgaactaccagtacctcgagctcttgtctttagctgcataa
tgtatcaaagatgcctagtcgcatccctgccaagagagatccaatgaatt
gcaacttatatgctcagatacagggatcgctatggcctatggcgtagtcg
ctcgcgccttgccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95057519_95058611
seq2: B6Ng01-163F21.b_48_1130

seq1  GAATTCAGTAGCATTCTATCTACTTATCTAATACCTAATATAAAAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCATTCTATCTACTTATCTAATACCTAATATAAAAAATCA  50

seq1  AAAACTTCCTCTTGATAGGGAGCTAGAGTCCCTGAGCACTTTCCTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCCTCTTGATAGGGAGCTAGAGTCCCTGAGCACTTTCCTTTTGA  100

seq1  TGTCTCTTGACCTCATCTTATCCCTGATCAGGAAAGGAACAAAACCGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTGACCTCATCTTATCCCTGATCAGGAAAGGAACAAAACCGTTC  150

seq1  AAAATAATTAAATAAAAATCAAAATAATAAAAAAAACCTGAACAATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTAAATAAAAATCAAAATAATAAAAAAAACCTGAACAATTTCT  200

seq1  ATAGTATAGTCTTTACGCATATCTTGATCAGAGAAGAGAAAGAAACAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATAGTCTTTACGCATATCTTGATCAGAGAAGAGAAAGAAACAATG  250

seq1  TACAGAGGGAGAGAAATAAGAACTAAATATAACCTTACCTATTTATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGGAGAGAAATAAGAACTAAATATAACCTTACCTATTTATGTCT  300

seq1  TAGGGAAATGTCTGACTGAAACAGCATTCTTTGTGTAATTGACATATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAATGTCTGACTGAAACAGCATTCTTTGTGTAATTGACATATACT  350

seq1  AATTATCAGTTATAAGTACATACTAACTAAAGGCACCAAGCTTCAATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAGTTATAAGTACATACTAACTAAAGGCACCAAGCTTCAATCCA  400

seq1  ATGTTCAGAACTTTGTCTTATATCAAAATAATTGCATATTTCATGACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGAACTTTGTCTTATATCAAAATAATTGCATATTTCATGACTAT  450

seq1  TTAGTGTAATTATAAGTGGTTCATGAGAATATATGTTGCTAACATGTTTC  500
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTAATTATAAGTGGTTCATGAGAATATATGTTGCTAACATGTTTC  500

seq1  AGGAAAAACTTGTTTCTGTTCAGTTTGTGGTGTGCAAAGTTTAAATGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAACTTGTTTCTGTTCAGTTTGTGGTGTGCAAAGTTTAAATGCTA  550

seq1  ACATGTCTAGCTCCATGTTTCTCATTTCTTTTTGTTTTCATTAATTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTAGCTCCATGTTTCTCATTTCTTTTTGTTTTCATTAATTCATT  600

seq1  TATGTATTCACTTTATCACCTGATCACTTCCTGCCTGTCTTTTCCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTCACTTTATCACCTGATCACTTCCTGCCTGTCTTTTCCTCCCA  650

seq1  GTTCTACCCTCTGACCTTTTCATCTCATTTCTTTCTGCCATTGTCCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACCCTCTGACCTTTTCATCTCATTTCTTTCTGCCATTGTCCTCAG  700

seq1  CAAAGGAGAGGCACACACTCCCCACCCCTACCAGGTTCCACACCACTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGAGGCACACACTCCCCACCCCTACCAGGTTCCACACCACTTTG  750

seq1  ACACACCACGTTGCATCAGGACTAAATGCATCCTCACCCACTGAAGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCACGTTGCATCAGGACTAAATGCATCCTCACCCACTGAAGCCAG  800

seq1  ACAAGTCAGCCCATCAAGGGGAAAAGGTTCCAAAAGCAGAGAACAAAGTT  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCAGCTCATCAAGGGGAAAAGGTTCCAAAAGCAGAGAACAAAGTT  850

seq1  CAAAAGGAGAAAACACCCAGTCTGATTTTTAGGAGACCCACATTTAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAGAAAACACCCAGTCTGATTTTTAGGAGACCCACATTTAAGAC  900

seq1  CAAGCTTCACATCTGTTCCATATGAGTAGGAGGCCTAGGTCCAGACCATG  950
      ||||||||||||||| | ||||||||||||||||||||||||||| ||||
seq2  CAAGCTTCACATCTG-TGCATATGAGTAGGAGGCCTAGGTCCAGA-CATG  948

seq1  CATGCTCTTTGATCGGTAGTTCAGTCTGTGTGAACTCCCAATGGGTCCAC  1000
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  CATGCTCTTTGATCGGTAG-TCAGTCTGTGTGAACTCCCAATGGGTTCAC  997

seq1  ATGACTTAGTTATGTAGGTCTCCTTCTGGAATGCTTGACTCTGTTGTAAA  1050
      ||||| |||| ||||| |||||  ||||||||||| ||||||||||| ||
seq2  ATGAC-TAGTAATGTA-GTCTC--TCTGGAATGCTGGACTCTGTTGT-AA  1042

seq1  GCTCTGATGACCCTTAGCTAATGGGGACCCTCGAGTGAAGAAC  1093
      |||||||||| |||||||| ||||||| ||||||||| |||||
seq2  GCTCTGATGA-CCTTAGCTTATGGGGA-CCTCGAGTGGAGAAC  1083