BAC Information

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BAC

Clone NameB6Ng01-164F03
Chromosome5 (Build37)
Map Location 69,918,681 - 70,013,071
singlet/doubletdoublet
Overlap geneYipf7, Guf1, Gnpda2
Upstream geneLOC666996, Kctd8, LOC545756
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164F03.bB6Ng01-164F03.g
ACCDH956677DH956678
length4701,157
definitionDH956677|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F03, 5' end.DH956678|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,012,596 - 70,013,071)(69,918,681 - 69,919,847)
sequence
ataaaaatagataaatagcatcagtttctagaagctgagggaatggacag
gcattatccaatgggtatgtagcatatacttccggaagtatataatgaag
tttgcacagaattgtgattgtacctagtacctgaatcagctaattgtctg
tctgtctgtctctctgtctctgtctctgtctctgtctctgtctctgtctc
tgtctctgtctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtacatatatatgcataccaacagaaatctcctcagatttttt
taaaaagtatgtctggaagtaattgcattaactaattcccaaataaacac
aattatttatttagcagtacatattactgttagttggaaatgtctttcat
attatgcttgtttcctcagaaactgcatgccagttttgagaagtttagag
agagagagagagagagagag
gaattcacctagttttaagggatacttaccaagtcaatgatgaacctgct
taaaagttatttttagttgaatgtttattaacctaaacatgtcttgcttg
tctcatgtatgtgtgaaatggggataaagttgttccttttgtagagaatc
tgtgttatatttcatatattttatttgccttaatttctccctttgagctt
gagtgcaggtaaaaaaaatagttatttttaactccaaaatttgaagggtt
tatgaagaagtttttataataatgacttagacgggcggtgttggtgcacg
cctttagtcccagcacttgggaggcagaggcaggcggatttctgagtttg
aggccagcctggtctacgacgtgagttccaggtcagccagggctatacag
agaaaccctgtttcgaaaaaaaaataataatgacttataataacagtttt
aattgagcaatatactggacactgccccccttttatcacttaaaactctg
tatgggcaaaactgcattgtaaataccattttacagaaaaataaatagag
tttggaaagtaaatgagccacacagcattctacttggagttccagattga
actttatgagcagtgctcttgttcttacatagaaaaaaggtttctctctg
ctcttcatgagcaaataacaacattaaagtttctctaaaaacgtgcagag
aggctaataaaaattataattctgcagtatgatcaaccaaaatgaaacaa
aaaatctatacactcagttttgttcacagagaaatgtattctccactatt
gggctattcccagaaaattactgtccattaaattatccataaatacctag
ggcaccttcaacagtatgtgagtagctaagtgccaaaactctttttacag
taagcaatttgcttttgccaaagcataatgcttttacatatccaggagtg
tggtttttgttttatcatatgcatcagaaacttgaaaaatactgattgtt
taaatactatagtagtgctagaggataaaaagacgaaaagagacagtcta
tgaaaatagtttatttcatatattatatattttccggaagataaatgagt
caggattatgaactttcgtatcttggaatcctttacactagaatttacca
atgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_70012596_70013071
seq2: B6Ng01-164F03.b_45_520 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCAACTTCTCAAAACTGGCATGCAGTT  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTAAACTTCTCAAAACTGGCATGCAGTT  50

seq1  TCTGAGGAAACAAGCATAATATGAAAGACATTTCCAACTAACAGTACTAT  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTGAGGAAACAAGCATAATATGAAAGACATTTCCAACTAACAGTAATAT  100

seq1  GTACTGCTAAATAAATAATTGTGTTTATTTGGGAATTAGTTAATGCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCTAAATAAATAATTGTGTTTATTTGGGAATTAGTTAATGCAATT  150

seq1  ACTTCCAGACATACTTTTTAAAAAAATCTGAGGAGATTTCTGTTGGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGACATACTTTTTAAAAAAATCTGAGGAGATTTCTGTTGGTATG  200

seq1  CATATATATGTACACACACACACACACACACACACACACACACACACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATGTACACACACACACACACACACACACACACACACACACAGA  250

seq1  GAGAGAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACA  300

seq1  GAGACAGAGAGACAGACAGACAGACAATTAGCTGATTCAGGTACTAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAGACAGACAGACAGACAATTAGCTGATTCAGGTACTAGGTA  350

seq1  CAATCACAATTCTGTGCAAACTTCATTATATACTTCCGGAAGTATATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACAATTCTGTGCAAACTTCATTATATACTTCCGGAAGTATATGCT  400

seq1  ACATACCCATTGGATAATGCCTGTCCATTCCCTCAGCTTCTAGAAACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCATTGGATAATGCCTGTCCATTCCCTCAGCTTCTAGAAACTGA  450

seq1  TGCTATTTATCTATTTTTATGAATTC  476
      ||||||||||||||||||||||||||
seq2  TGCTATTTATCTATTTTTATGAATTC  476

seq1: chr5_69918681_69919847
seq2: B6Ng01-164F03.g_67_1223

seq1  GAATTCACCTAGTTTTAAGGGATACTTACCAAGTCAATGATGAACCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAGTTTTAAGGGATACTTACCAAGTCAATGATGAACCTGCT  50

seq1  TAAAAGTTATTTTTAGTTGAATGTTTATTAACCTAAACATGTCTTGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTATTTTTAGTTGAATGTTTATTAACCTAAACATGTCTTGCTTG  100

seq1  TCTCATGTATGTGTGAAATGGGGATAAAGTTGTTCCTTTTGTAGAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTATGTGTGAAATGGGGATAAAGTTGTTCCTTTTGTAGAGAATC  150

seq1  TGTGTTATATTTCATATATTTTATTTGCCTTAATTTCTCCCTTTGAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATATTTCATATATTTTATTTGCCTTAATTTCTCCCTTTGAGCTT  200

seq1  GAGTGCAGGTAAAAAAAATAGTTATTTTTAACTCCAAAATTTGAAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAGGTAAAAAAAATAGTTATTTTTAACTCCAAAATTTGAAGGGTT  250

seq1  TATGAAGAAGTTTTTATAATAATGACTTAGACGGGCGGTGTTGGTGCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAGTTTTTATAATAATGACTTAGACGGGCGGTGTTGGTGCACG  300

seq1  CCTTTAGTCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTG  350

seq1  AGGCCAGCCTGGTCTACGACGTGAGTTCCAGGTCAGCCAGGGCTATACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTACGACGTGAGTTCCAGGTCAGCCAGGGCTATACAG  400

seq1  AGAAACCCTGTTTCGAAAAAAAAATAATAATGACTTATAATAACAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTGTTTCGAAAAAAAAATAATAATGACTTATAATAACAGTTTT  450

seq1  AATTGAGCAATATACTGGACACTGCCCCCCTTTTATCACTTAAAACTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGCAATATACTGGACACTGCCCCCCTTTTATCACTTAAAACTCTG  500

seq1  TATGGGCAAAACTGCATTGTAAATACCATTTTACAGAAAAATAAATAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCAAAACTGCATTGTAAATACCATTTTACAGAAAAATAAATAGAG  550

seq1  TTTGGAAAGTAAATGAGCCACACAGCATTCTACTTGGAGTTCCAGATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGTAAATGAGCCACACAGCATTCTACTTGGAGTTCCAGATTGA  600

seq1  ACTTTATGAGCAGTGCTCTTGTTCTTACATAGAAAAAAGGTTTCTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGAGCAGTGCTCTTGTTCTTACATAGAAAAAAGGTTTCTCTCTG  650

seq1  CTCTTCATGAGCAAATAACAACATTAAAGTTTCTCTAAAAACGTGCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATGAGCAAATAACAACATTAAAGTTTCTCTAAAAACGTGCAGAG  700

seq1  AGGCTAATAAAAATTATAATTCTGCAGTATGATCAACCAAAATGAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAATAAAAATTATAATTCTGCAGTATGATCAACCAAAATGAAACAA  750

seq1  AAAATCTATACACTCAGTTTTGTTCACAGAGAAATGTATTCTCCACTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATACACTCAGTTTTGTTCACAGAGAAATGTATTCTCCACTATT  800

seq1  -GGCTATTCCCAGAAAATTACTGTCCATTAAATTATCCATAAATACCTAG  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATTCCCAGAAAATTACTGTCCATTAAATTATCCATAAATACCTAG  850

seq1  GGCACCTTCAACAGTATGTGAGTAGCTAAGTGCCAAAACTCTTTTTACAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTTCAACAGTATGTGAGTAGCTAAGTGCCAAAACTCTTTTTACAG  900

seq1  TAAGCAATTTGCTTTTGCCAAAGCATAATGCTTTTACATATCCAGGAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAATTTGCTTTTGCCAAAGCATAATGCTTTTACATATCCAGGAGTG  950

seq1  TGGTTTTTGTTTTATCATATGCATCAGAAACTTGAAAAATACCTGATTGT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGTTTTTGTTTTATCATATGCATCAGAAACTTGAAAAATA-CTGATTGT  999

seq1  TTTAAATTACTTATAGTAGTGCTAGAGGAT-AAAAGACAGAAAAGGAAGA  1048
      ||  || ||| ||||||||||||||||||| ||||||| ||||||  |||
seq2  TT--AAATAC-TATAGTAGTGCTAGAGGATAAAAAGAC-GAAAAG--AGA  1043

seq1  CAGTCTATGAAAATAGTTTATTTCATATA-TATATATAT--CCGAAGATA  1095
      ||||||||||||||||||||||||||||| ||||||| |  | |||||||
seq2  CAGTCTATGAAAATAGTTTATTTCATATATTATATATTTTCCGGAAGATA  1093

seq1  AATAGAGTTCAAGATTATGAAC-TTCGTAATTCTTGAGATCTCTTTACAC  1144
      ||| ||| ||| |||||||||| ||||||  |||||  ||| ||||||||
seq2  AAT-GAG-TCAGGATTATGAACTTTCGTA--TCTTGGAATC-CTTTACAC  1138

seq1  TAGAATATTTTACACAATGACTT  1167
      |||||   ||||| |||||||||
seq2  TAGAA---TTTAC-CAATGACTT  1157