BAC Information

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BAC

Clone NameB6Ng01-175J04
Chromosome5 (Build37)
Map Location 61,520,903 - 61,521,938
singlet/doubletsinglet
Overlap geneLOC666597
Upstream geneCbfa2t2-ps1, LOC100041498
Downstream geneEG666610, LOC100041524, G6pd2, LOC100041543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175J04.bB6Ng01-175J04.g
ACCGA003341GA003342
length1,2131,031
definitionB6Ng01-175J04.b B6Ng01-175J04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatattaccaagacttttatcatgaatgggtattgaattttg
tcaaatgctttctcagcatctaatgagatgttcatgtgttttttttttcc
tttgagttttttatgtagtggattatgttgatagatttccatatactgta
ccatccctgcatcccttggatgaagccttcttgatcatgatggattcttg
attacattggccatctaggtggtttccaatttcttgctattaaaaacata
agtgaacatagcccttgaggtatggtggaacatcaattgagtgcatgccc
agaaataatatagctgggtatttaggatgagctatttccagttatttgcg
aaaacaccaaattcatttccagagtggttggacaagtttggactaccaac
agaaatggaggagtgttctccttgctccacatcctcaccagcacttgctg
tcacttgagtttttgtccttcaccattctgattgttgtaaggtggaaact
cattgttgtgatttacatttccctgatgactaaagacaaattttctctat
gtagccctggctgtctttgaactttctggcctacaactcagagattcatc
tgctctgccttctaaggactaggattaatcccttctggtaggcaccagca
ccaggtcaccttgggcgcagaggcagcagataccccccaaggtcccctag
aggactctccatgcgatcttaggaccaccggtgagtgggacacaacttct
gttccaatccaatcacaggggaactgagacagcattaggaaagcaggaaa
cccggcctgaccagggtcacaagaccctttctggtcagcaccagcacttt
ggtcacctgggtgcagagttggtggacacccccaacgaccctagagaaca
gctttctgagacatccgggtttcaggctctagacatccaggcacatttcc
ctgccagagagaggtgtctgccttgccgggagggctttgctggagcacct
tgggggagccatcttgggttccaaatccctctgagactagtctgtgcaga
gagaatgtagacttacagagctacagcttctgtgaacgacgaagccagtc
aagctcctggacagtctgtttcaaggcctcatcttctggccagaaggagt
ctaatccgaatttctgtgtcacttccatgttaagagagatgactggactt
caaaatggtgctc

gaattctctgcaagaatattgagggttgcttatgtatcataccatccaca
aatagtgatactttgacttcttcctgaaacttttacttttatgctctttc
aaaatatctttcagctttcttacaataatcaacttaatttaaaaccttaa
atagtcttccaaaaatcattataaatattgtgatttcctggtcaataaga
ggtatgtgtcaataaatatactttatagtatatatgtattctgtattaaa
tactgtaccatgtgcttttttatgtaaaaaaagctttattaaagtttttc
atcatccagtaggttttatttatataaatttacattttttggtaagacat
ggcttctgtatgttaatacatattttttcttatttttataattatgtatg
caatctttttttcttaatgtgatacatatgtgcatacaaattcagataca
tgtttacatgtataagtaatttataaatgtataaatgctagaagaaaata
aaataaaggcccaatagcaaccaatatatttatatacaaacgtttattat
gctttttaaaaatagttatgcttaaacaaatatacctcaggagcatatgt
actttctgactgtaggacagtcatttaaaaggtcaaaaggaaaaagcaac
ttcattctgagccctcctcaaaaccttcccaccacctattacttgtctca
caatcaatataccttcagagggcagaaattattcttcttgataaatgatt
agtattttctcatggtcaaaaagattcatggtagaaagtacccaaggagc
tgaagaggtttgcagccccataggaggaacaacagtatgaactaaccagt
acccccagagctcctggggactaacccaccaatcaaagaaaacacatggg
tgggatgtgtgcctctagcttcatatgtagcagaggatggcctacttgtt
catcaatttgagagaggccctagttcctgtgaagtctatgccccagaata
gggaatgccagggtcagaatgtagtgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_61520903_61521938
seq2: B6Ng01-175J04.g_63_1093

seq1  GAATTCTCTGCAAGAATATTGAGGGTTGCTTATGTATCATACCATCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAAGAATATTGAGGGTTGCTTATGTATCATACCATCCACA  50

seq1  AATAGTGATACTTTGACTTCTTCCTGAAACTTTTACTTTTATGCTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGATACTTTGACTTCTTCCTGAAACTTTTACTTTTATGCTCTTTC  100

seq1  AAAATATCTTTCAGCTTTCTTACAATAATCAACTTAATTTAAAACCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTTTCAGCTTTCTTACAATAATCAACTTAATTTAAAACCTTAA  150

seq1  ATAGTCTTCCAAAAATCATTATAAATATTGTGATTTCCTGGTCAATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTTCCAAAAATCATTATAAATATTGTGATTTCCTGGTCAATAAGA  200

seq1  GGTATGTGTCAATAAATATACTTTATAGTATATATGTATTCTGTATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTGTCAATAAATATACTTTATAGTATATATGTATTCTGTATTAAA  250

seq1  TACTGTACCATGTGCTTTTTTATGTAAAAAAAGCTTTATTAAAGTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTACCATGTGCTTTTTTATGTAAAAAAAGCTTTATTAAAGTTTTTC  300

seq1  ATCATCCAGTAGGTTTTATTTATATAAATTTACATTTTTTGGTAAGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCAGTAGGTTTTATTTATATAAATTTACATTTTTTGGTAAGACAT  350

seq1  GGCTTCTGTATGTTAATACATATTTTTTCTTATTTTTATAATTATGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGTATGTTAATACATATTTTTTCTTATTTTTATAATTATGTATG  400

seq1  CAATCTTTTTTTCTTAATGTGATACATATGTGCATACAAATTCAGATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTTTTTCTTAATGTGATACATATGTGCATACAAATTCAGATACA  450

seq1  TGTTTACATGTATAAGTAATTTATAAATGTATAAATGCTAGAAGAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATGTATAAGTAATTTATAAATGTATAAATGCTAGAAGAAAATA  500

seq1  AAATAAAGGCCCAATAGCAACCAATATATTTATATACAAACGTTTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGGCCCAATAGCAACCAATATATTTATATACAAACGTTTATTAT  550

seq1  GCTTTTTAAAAATAGTTATGCTTAAACAAATATACCTCAGGAGCATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAAAAATAGTTATGCTTAAACAAATATACCTCAGGAGCATATGT  600

seq1  ACTTTCTGACTGTAGGACAGTCATTTAAAAGGTCAAAAGGAAAAAGCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGACTGTAGGACAGTCATTTAAAAGGTCAAAAGGAAAAAGCAAC  650

seq1  TTCATTCTGAGCCCTCCTCAAAACCTTCCCACCACCTATTACTTGTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTGAGCCCTCCTCAAAACCTTCCCACCACCTATTACTTGTCTCA  700

seq1  CAATCAATATACCTTCAGAGGGCAGAAATTATTCTTCTTGATAAATGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAATATACCTTCAGAGGGCAGAAATTATTCTTCTTGATAAATGATT  750

seq1  AGTATTTTCTCATGGTCAAAAAGATTCATGGTAGAAAGTACCCAAGGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTCTCATGGTCAAAAAGATTCATGGTAGAAAGTACCCAAGGAGC  800

seq1  TGAAGAGGTTTGCAGCCCCATAGGAGGAACAACAGTATGAACTAACCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGTTTGCAGCCCCATAGGAGGAACAACAGTATGAACTAACCAGT  850

seq1  ACCCCCAGAGCTCCTGGGGACTAACCCACCAATCAAAGAAAACACAT-GG  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACCCCCAGAGCTCCTGGGGACTAACCCACCAATCAAAGAAAACACATGGG  900

seq1  TGGGATGTGTGCCTCTAGCTTCATATGTAGCAGAGGATGGCCTACTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGTGTGCCTCTAGCTTCATATGTAGCAGAGGATGGCCTACTTGTT  950

seq1  CATCAATTTGAGGAGAGGCCCTAGTTCCTGTGAAGGTTCTATGCCCCAGA  999
      ||||||||||| |||||||||||||||||||||||  |||||||||||||
seq2  CATCAATTTGA-GAGAGGCCCTAGTTCCTGTGAAG--TCTATGCCCCAGA  997

seq1  ATAGGGGAATGCCAGGGCCAGGAATGGGAGTGGGTGG  1036
      ||| ||||||||||||| || |||| | |||||||||
seq2  ATA-GGGAATGCCAGGGTCA-GAAT-GTAGTGGGTGG  1031


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