BAC Information

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BAC

Clone NameB6Ng01-178O12
Chromosome5 (Build37)
Map Location 7,040,379 - 7,041,533
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041208, EG435830
Downstream geneLOC100042651, 4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178O12.bB6Ng01-178O12.g
ACCGA005767GA005768
length1,2051,147
definitionB6Ng01-178O12.b B6Ng01-178O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaccatgataaaagcaatctacagcaaacca
gcagccaacatcaaagtaaatggttagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctctacctataattcaacattgt
acttgaagtcctagccagagcaatgcgacaacaaaaggagatcaagggga
tacaaattggaaaggaagaagccaaaatatcactttttgcagatgatatg
atagcatatataaatgaccctaaaaattccaccagagaactcctaagcct
gataaacagcttcaatcaagtagctggatataaaattaactcaaacaagt
caatggcctttctgtacacaaaagataaacaggctgagaaagaaattagg
gaaacaacactcttctcaatagtcacaaataatataaaataccttggcat
gactctaactaaggaagtaaaagatctgtatgataagaaattcaagtctc
tgaaaaaagaaattaaagatctcagaagatggaaagatctcccatgctca
tggaatggcaggatcaatatagtaaaaacggctatcttgccaaaagcaat
ctacagattcaatgcaatccctatcaaaattccaactcaattcttcaatg
aattaggaagggcaattggcagattcatctgaaataacaaaaaacctagg
atagcaaaaaatcttctcaaggataaaagaacctctgttggaatcaccat
gcctgacctaaagctgtactacagagcaattgtgataaaaactgcatggt
actggtatagtgacagagaagtagaccaatggaacagaattgaagaccca
gagatgaacccacacacctatggtcacttgatctttgacaagggagctaa
aaccatccagtgcaaaaaagacagcattttcaacaaatggtgctggctca
actgatgggttatcatgcccgaagaatgcgaattgatccattccatctcc
ttgtactaagtcaaatctaagtggattaaggaactccacataaaccagag
accactgaaactatagaggagaaagtagggaaagcctcgaagatatggta
caggggaaatctgaatagaagagcatgctcatgctgtagattggaatcat
atgggacctcataagcttccaagctcttccaagcctaaagactccgcgtc
tcatt

gaattcagtttgaaaatatcagaagcatgtgtttgtagattggattagta
aaatgttggcatttgcaaatataatctttctggaaatgtaaatcccttta
tttctttttggttttgttgtataaataatgtatggtttatcaatatgagt
gagaatattttaatcatatctatcagcatagacatctcgaatactaccca
tttcttctggtatgaagatttgaatttattccctgtgtaatttagagaca
ttaggagaacaaataatttactgtgttcaccatctggacaaaatacttaa
agaagagaaaaaaatcctgctttctctttaaatgaaactttattccttct
gataaccattgcccaactgcatgcaacaatcttaacctctggttatatat
attgtttgcattttagttgaattaattttagattttacatgtaagtttaa
atacataatatatgctcttctatttaatttaacataacatcatacattcc
cattcatgttgtcaccatgtgtgtataatacattatatcacatttggttc
atgtattaagttgttgataaacatttaaagtcactttatacatggaatgc
tctgactacagtacactatttccaatatactgatttcaactcccttggcc
caattatcagaattttttgcattatgtcgattatctacttgtatgtggtt
tttacatcttttccatttccattccataatactgggaatcaaatggagaa
ctctatgtatagaagataaggactgtatctagtctcagactatttcccta
agccttacttattgttttctagatgaacttccatagttttaaaatgtcta
tattcatttactttttcatgaaaatacacaaaagaaccctactgttttaa
agaaagcatgaacacacacacacacacacacacacacacacaattatctg
tatcatacatgtatatatagcatttttatatttgttatgagatttaaaac
attgatttgacaaaaattgatgaaattcaagtattggacagtacccacat
aatatttttttttcaatttttaaaactatcttattgttttgtactgtgca
ttactgtccctctcatctgctcttcggcagccttcacccaattcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7040379_7041533
seq2: B6Ng01-178O12.g_65_1211 (reverse)

seq1  GAGGAATGGGGTGAGGGGCTGCCGAGGAGCAGAATGGGAGAGGGACAGTG  50
      ||||||| ||||||  ||||||||| |||||||    |||||||||||| 
seq2  GAGGAATTGGGTGA-AGGCTGCCGAAGAGCAGA---TGAGAGGGACAGT-  45

seq1  AATGCACAGTACAAAACAATAAAGATAATTTTTAAAAATGGAAAAAAATT  100
      |||||||||||||||||||| |||||| |||| |||| || ||||||| |
seq2  AATGCACAGTACAAAACAAT-AAGATAGTTTTAAAAATTGAAAAAAAAAT  94

seq1  ATTATGTGGGTACCTTGTCCAATACTTGAATTTTCATCAATTTTTGTCAA  150
      |||||||||||||  ||||||||||||||| |||||||||||||||||||
seq2  ATTATGTGGGTAC--TGTCCAATACTTGAA-TTTCATCAATTTTTGTCAA  141

seq1  ATCCATGTTTTAAATCTCATAACAAATAT-AAAATGCTATATATACATGT  199
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCAATGTTTTAAATCTCATAACAAATATAAAAATGCTATATATACATGT  191

seq1  ATGATACAGATAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAGATAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATG  241

seq1  CTTTCTTTAAAACAGTA-GGTTCTTTTGTGTATTTTCATGAAAAAGTAAA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTTCTTTAAAACAGTAGGGTTCTTTTGTGTATTTTCATGAAAAAGTAAA  291

seq1  TGAATATAGACATTTTAAAACTATGGAAGTTCATCTAGAAAACAATAAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAGACATTTTAAAACTATGGAAGTTCATCTAGAAAACAATAAGT  341

seq1  AAGGCTTAGGGAAATAGTCCTGAGACTAGATACAGTCCTTATCTTCTATA  398
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGCTTAGGGAAATAGT-CTGAGACTAGATACAGTCCTTATCTTCTATA  390

seq1  CATAGAGTTCTCCATTTGATTCCCAGTATTATGGAATGGAAATGGAAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGTTCTCCATTTGATTCCCAGTATTATGGAATGGAAATGGAAAAG  440

seq1  ATGTAAAAACCACATACAAGTAGATAATCGACATAATGCAAAAAATTCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAACCACATACAAGTAGATAATCGACATAATGCAAAAAATTCTG  490

seq1  ATAATTGGGCCAAGGGAGTTGAAATCAGTATATTGGAAATAGTGTACTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGGGCCAAGGGAGTTGAAATCAGTATATTGGAAATAGTGTACTGT  540

seq1  AGTCAGAGCATTCCATGTATAAAGTGACTTTAAATGTTTATCAACAACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGCATTCCATGTATAAAGTGACTTTAAATGTTTATCAACAACTT  590

seq1  AATACATGAACCAAATGTGATATAATGTATTATACACACATGGTGACAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGAACCAAATGTGATATAATGTATTATACACACATGGTGACAAC  640

seq1  ATGAATGGGAATGTATGATGTTATGTTAAATTAAATAGAAGAGCATATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGGAATGTATGATGTTATGTTAAATTAAATAGAAGAGCATATAT  690

seq1  TATGTATTTAAACTTACATGTAAAATCTAAAATTAATTCAACTAAAATGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTAAACTTACATGTAAAATCTAAAATTAATTCAACTAAAATGC  740

seq1  AAACAATATATATAACCAGAGGTTAAGATTGTTGCATGCAGTTGGGCAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATATATATAACCAGAGGTTAAGATTGTTGCATGCAGTTGGGCAAT  790

seq1  GGTTATCAGAAGGAATAAAGTTTCATTTAAAGAGAAAGCAGGATTTTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCAGAAGGAATAAAGTTTCATTTAAAGAGAAAGCAGGATTTTTTT  840

seq1  CTCTTCTTTAAGTATTTTGTCCAGATGGTGAACACAGTAAATTATTTGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTTAAGTATTTTGTCCAGATGGTGAACACAGTAAATTATTTGTT  890

seq1  CTCCTAATGTCTCTAAATTACACAGGGAATAAATTCAAATCTTCATACCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAATGTCTCTAAATTACACAGGGAATAAATTCAAATCTTCATACCA  940

seq1  GAAGAAATGGGTAGTATTCGAGATGTCTATGCTGATAGATATGATTAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATGGGTAGTATTCGAGATGTCTATGCTGATAGATATGATTAAAA  990

seq1  TATTCTCACTCATATTGATAAACCATACATTATTTATACAACAAAACCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCACTCATATTGATAAACCATACATTATTTATACAACAAAACCAA  1040

seq1  AAAGAAATAAAGGGATTTACATTTCCAGAAAGATTATATTTGCAAATGCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAAAGGGATTTACATTTCCAGAAAGATTATATTTGCAAATGCC  1090

seq1  AACATTTTACTAATCCAATCTACAAACACATGCTTCTGATATTTTCAAAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTACTAATCCAATCTACAAACACATGCTTCTGATATTTTCAAAC  1140

seq1  TGAATTC  1155
      |||||||
seq2  TGAATTC  1147


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