BAC Information

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BAC

Clone NameB6Ng01-178P06
Chromosome5 (Build37)
Map Location 96,235,606 - 96,235,693
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380, EG666203, EG666209, LOC665943
Downstream geneLOC433921, Cxcl13, EG666231, Cnot6l, LOC100040559, Mrpl1, Fras1, Anxa3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178P06.bB6Ng01-178P06.g
ACCGA005802GA005803
length1,022779
definitionB6Ng01-178P06.b B6Ng01-178P06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgagaaatatcgaatggcagagaagcacctgagaaaatg
ttcaaaatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggacgtggagaaagaggaacacttctcaattgttggtg
ggattacaagcttgtacaaccactctggatatcagtctggcgtttcctca
gaaaattggacataatactactggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacatatgctccactat
gttcatagcagccttacttataatagtcagaagctggaaataacccagac
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gggtactactcagctattaaaaagaatgaatttatgaaattcctacgcaa
atggatagacctgtatggcatcatccagagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacacatgaaactcat
gaagaatgaagaacaaagtgtggacactttgccccttcctagaaatggga
acaaaacacccatgggagttacagagacaaaatttggagctatgactaaa
ggatggaccatctagtgattgccatatccagggatccatcccataatcag
cttccaaacgctgacaccattgcatacactagcaagattttgctgtaagg
acccagatatagctgtatcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctattggatgggtcaacagcctacaatg
gagagctagagaaagtacccaaggagctaaagggaactgcaacctatatg
tgaaacacacgtgaactaacca
gaattctttgttcagctctgatccccactttttaatggggatatttaatt
ttatgctggctgttggtttccatataattgcaatgtgtgtgcaatgaatt
cctaatatctgtatgacttataacaggaaaaggtgttgcatattttcaaa
gggttttaaggcatctaaaaatatgagcatataattttttggagttaatt
tatatagtagattgtgttgatggatttttgtatactgaaccaccccttcc
ttcctgggatgaggcctacttgatcacagtgaatgacattttttaatgcg
ttctttaatttgttctgagagaattttattgagtagttttgtattgctat
tcctaagcaaatttggtctgaagttttctagtttgttggatctttgtatc
atttaagtatcagagtaactgtggcttcatgcaatgaattaggtagtggt
ctttctgtttctgttttgtggaagagtttgatgagcattggtattagttc
ttttttgaaggtctggtagaattctgccataaaaccatctggtcctggga
tttctttagatgacaggctttgaatttcttcttctgtttcctcaggtgtt
atggaactctttagatattttatctcatgttgattaaacactggtaggtt
gtgtcagtctagaaaatgatcccatttcattttgatttttccagtaagct
gcacataggctttagaagcaagatctcatgattcattgaatttttctcag
tttctggtaatggctcctttttacatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_96235606_96235693
seq2: B6Ng01-178P06.b_935_1020 (reverse)

seq1  AGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGAGGGCCCTGTGTTCCA  50
      ||||||||||||||||||||||||| ||||||||  |||  | ||  |||
seq2  AGCTCCTTGGGTACTTTCTCTAGCT-CTCCATTGTAGGCTGT-TGACCCA  48

seq1  TCCAATAGGTGACTGTGAGCATCCAGTTCTGTGTTTGC  88
      |||||||| |||||||||||||||| ||||||||||||
seq2  TCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGC  86