BAC Information

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BAC

Clone NameB6Ng01-179G15
Chromosome5 (Build37)
Map Location 78,502,155 - 78,503,060
singlet/doubletsinglet
Overlap genenone
Upstream geneHod, Spink2, Rest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneLOC100039398, Mthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179G15.b
ACCGA006142
length908
definitionB6Ng01-179G15.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctgtattttaatgagcattatgtatacataaattttattca
gcatttcatattgtttcttctgatttgaaatggaatttacaaatgcttaa
ataaattaattgaaaaattgttaacaaaagtgtaactcatatacatattt
tcagtgtctcaatgaaatccaattttctaatgcctcattcaggtaatact
gtttaatgaaccacaaccaactacaattttagttacttaaacttccttcc
tttttttccctacttatatttttcaaaatgtggaatgaagaggaaggtca
aatataccaaaagagttacaaaactatagacagttttgttcttcacatct
ccatactacaccatacagttttctaagaagaaaaggaaaatgaacaaaca
aaaataaaacaagaaaaccaacccaaaccacccattccgtttgatcttga
aggaacagaatctcaccattagacaggaatatcttgttgtgtggaaggga
agggagaaaagttggaggaatcattggcaatgagggacaccaaggaaaca
gtgcttaccagatcaaacaaagcgcacgcacacatgaactcacaaagaca
gtggcagcacaggccagctggaagccacatggcccagcactgagagggag
gagtagatgtgagttccccctcctgaaccagaagctatctccaatttgcc
ttccccttggttttagtttttctccagtagtgctttcgctggggatatca
cccacacttcagagcaggacctatgctcagcagtatatgccaacacaaaa
gcaactcaaaagcatttttgttggtgtttggtctcatgttcctgcatttg
gattggagatttattttttttgcctatacttttattttatttttaaaatg
cgtgtgtg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78502155_78503060
seq2: B6Ng01-179G15.b_43_950

seq1  GAATTCTTCCTGTATTTTAATGAGCATTATGTATACATAATTTTTATTCA  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAATTCTTCCTGTATTTTAATGAGCATTATGTATACATAAATTTTATTCA  50

seq1  GCATTTCATATTGTTTCTTCTGATTTGAAATGGAATTTACAAATGCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCATATTGTTTCTTCTGATTTGAAATGGAATTTACAAATGCTTAA  100

seq1  ATAAATTAATTGAAAAATTGTTAACAAAAGTGTAACTCATATACATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAATTGAAAAATTGTTAACAAAAGTGTAACTCATATACATATTT  150

seq1  TCAGTGTCTCAATGAAATCCAATTTTCTAATGCCTCATTCAGGTAATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCTCAATGAAATCCAATTTTCTAATGCCTCATTCAGGTAATACT  200

seq1  GTTTAATGAACCACAACCAACTACAATTTTAGTTACTTAAACTTCCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGAACCACAACCAACTACAATTTTAGTTACTTAAACTTCCTTCC  250

seq1  TTTTTTTCCCTACTTATATTTTTCAAAATGTGGAATGAAGAGGAAGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCCTACTTATATTTTTCAAAATGTGGAATGAAGAGGAAGGTCA  300

seq1  AATATACCAAAAGAGTTACAAAACTATAGACAGTTTTGTTCTTCACATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACCAAAAGAGTTACAAAACTATAGACAGTTTTGTTCTTCACATCT  350

seq1  CCATACTACACCATACAGTTTTCTAAGAAGAAAAGGAAAATGAACAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTACACCATACAGTTTTCTAAGAAGAAAAGGAAAATGAACAAACA  400

seq1  AAAATAAAACAAGAAAACCAACCCAAACCACCCATTCCGTTTGATCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACAAGAAAACCAACCCAAACCACCCATTCCGTTTGATCTTGA  450

seq1  AGGAACAGAATCTCACCATTAGACAGGAATATCTTGTTGTGTGGAAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGAATCTCACCATTAGACAGGAATATCTTGTTGTGTGGAAGGGA  500

seq1  AGGGAGAAAAGTTGGAGGAATCATTGGCAATGAGGGACACCAAGGAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAAAAGTTGGAGGAATCATTGGCAATGAGGGACACCAAGGAAACA  550

seq1  GTGCTTACCAGATCAAACAAAGCGCACGCACACATGAACTCACAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACCAGATCAAACAAAGCGCACGCACACATGAACTCACAAAGACA  600

seq1  GTGGCAGCACAGGCCAGCTGGAAGCCACATGGCCCAGCACTGAGAGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGCACAGGCCAGCTGGAAGCCACATGGCCCAGCACTGAGAGGGAG  650

seq1  GAGTAGATGTGAGTTCCCCCTCCTGAACCAGAAGCTATCTCCAATTTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGATGTGAGTTCCCCCTCCTGAACCAGAAGCTATCTCCAATTTGCC  700

seq1  TT-CCCTTGGTTTTAG-TTTTCTCCAGTAGTGC-TTCGCTGGGGATATCA  747
      || ||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TTCCCCTTGGTTTTAGTTTTTCTCCAGTAGTGCTTTCGCTGGGGATATCA  750

seq1  CCCACACTTCAGAGCAGGACCTATGCTCAGCAGTAGATGCCAACACAAAG  797
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  CCCACACTTCAGAGCAGGACCTATGCTCAGCAGTATATGCCAACACAAAA  800

seq1  CAAACTCAAAAGCATTTTTGTTGGTGTTTGGTCTCATGTTCCTGCATTTG  847
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCAAAAGCATTTTTGTTGGTGTTTGGTCTCATGTTCCTGCATTTG  850

seq1  GATTTGGAGATTTATTTTTTTTGCCTATACTTTTATTTTATTTTTAAAAT  897
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-TTGGAGATTTATTTTTTTTGCCTATACTTTTATTTTATTTTTAAAAT  899

seq1  GTGTGTGTG  906
      | |||||||
seq2  GCGTGTGTG  908