BAC Information

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BAC

Clone NameB6Ng01-184L07
Chromosome5 (Build37)
Map Location 5,170,261 - 5,306,692
singlet/doubletdoublet
Overlap genePftk1
Upstream geneENSMUSG00000053178, LOC100041073, Fzd1, LOC667678
Downstream gene1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184L07.bB6Ng01-184L07.g
ACCGA010015GA010016
length1,2261,081
definitionB6Ng01-184L07.b B6Ng01-184L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,170,261 - 5,171,485)(5,305,617 - 5,306,692)
sequence
gaattcttattaaatctgagctctcttccatacatgaaagaaaaatgggg
caagtgcaagaacccttcagatctgagggcttaccttactcaaagtgaca
cttcagtgtggagcactgattttttttttttaacggatatttttcaaagg
caattttacttagggattttcaggtctattccttttgaacatacttatct
tactttaaatactgtgagttttactataaattactctgtacataaaatca
ttttataaatggcagtgtttaatgtcagtcctttgccagagatgacaagt
tactttagcaatgataagtcctccaatcattttaagtattccatcttatt
cttggctttgtgcttacaataatggtcttctgtttttttcttgacataaa
aatgtaagacaaaagaaaaaaatcaagccaacaagctaacggagtgatca
cagttactttaactcagcctccctggtataacctacaaaactcctttgac
tatactatcactgggactagggaggtgaaagatcagttgtccatcatgca
gaaaacatggtcagttaaatctgtggtttgaatatacttggcccacggga
agtggcactatttagaggtgtggccttggtggagtaggtatggccttgtg
agggaaaattcaacactgtggggttggattttgaggctctaagctgaggc
tccacccagtgttaaagcgagcctcctcttggctgcctgcagaagagtct
gttttctcctggctgccctctcatcaagatgtaaaactcttggctcccca
acaccaagtctgcctgcatactttccatgcttcctcactatgactataat
ggactgagcctctgaaactgtaagccagacccaattaagtgtttaccatt
atacaaattgtcttggtcatggtgtctctttcagagcaataaaacactaa
cctaggacagagttaaaactagggatttggaaatgtcacaacagagttcc
aaacagaaaactgcccatcattcattcagattgtatcagagcctgggtaa
tagccagaggtgctaaccatgcagctattaaacagaataggtaaatcact
gcttcctggacttccgtctaataggaagcattccttcttcactcacatga
catctgactcatacgctgctgaacacttatgtccgcagtatcagaggctg
aagtacactgccatatatactgtatg

gaattctggttttccacatcttttttgatgcctgttgtctgatgttgtcc
atcacactggaagggaagtgttcctgggcttgacttccatttctatattg
attagtgattaaacaccacttcattttgacatcggctgttgtccagcttc
tgtggaggcatacatattttgcatttgcttttatttttattcttcctttt
ttctttttttcttctttcttctcttcttcctccttttcctcctcttcttc
cttctcctccccctccccccttttgagacagctctggaactcactttgaa
gagcaagctggcttcaaagtcagggttctgcctgcctttgtctctgtctc
cctagtgctggggtcagaggtgtgctggctgaggcataggctttaagtga
cttgtttttatattattgacttgcggtctatcattgattatggatgctag
tttcacatcagaaacatgagctgcaaagttgcctcaattttccggcttgt
cttttgatctcatattgatatgccgagaagcactaacatttttgattggg
tccagctgcccattgtcgtctttgcttttcatggaaatgattcatatcta
agaagccattgccgagtttgtgatcttgtatacctacacttttgcttttt
tctagttctagcttttacatttcagacagtgatccattttgagttaatct
gggtatatgatgcaagggaaggccacactattaagaatcaagtttgactt
cagtttctaggatgacctctctcaaatcctccatatcctagacatagaac
ctaggggaggacagagtttcctttaaaagtgtgattacatttaattaaac
aaatacctaagttagagtggcatctgccattgggcctctctgtcccttgt
ggaactccttccttacaatttggtttataaaattgtctttgccccaagag
tgggggaacctcagagaatggacaccagaacaaaggatatgaagagaata
tcatagttagtgttaaaagaaaaccaatgtagatggaagttcagctgtct
acactctcagtgcacaatctgttgcttataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5170261_5171485
seq2: B6Ng01-184L07.b_43_1268

seq1  GAATTCTTATTAAATCTGAGCTCTCTTCCATACATGAAAGAAAAATGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTAAATCTGAGCTCTCTTCCATACATGAAAGAAAAATGGGG  50

seq1  CAAGTGCAAGAACCCTTCAGATCTGAGGGCTTACCTTACTCAAAGTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCAAGAACCCTTCAGATCTGAGGGCTTACCTTACTCAAAGTGACA  100

seq1  CTTCAGTGTGGAGCACTGATTTTTTTTTTTTAACGGATATTTTTCAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGTGGAGCACTGATTTTTTTTTTTTAACGGATATTTTTCAAAGG  150

seq1  CAATTTTACTTAGGGATTTTCAGGTCTATTCCTTTTGAACATACTTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTACTTAGGGATTTTCAGGTCTATTCCTTTTGAACATACTTATCT  200

seq1  TACTTTAAATACTGTGAGTTTTACTATAAATTACTCTGTACATAAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAATACTGTGAGTTTTACTATAAATTACTCTGTACATAAAATCA  250

seq1  TTTTATAAATGGCAGTGTTTAATGTCAGTCCTTTGCCAGAGATGACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAATGGCAGTGTTTAATGTCAGTCCTTTGCCAGAGATGACAAGT  300

seq1  TACTTTAGCAATGATAAGTCCTCCAATCATTTTAAGTATTCCATCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAGCAATGATAAGTCCTCCAATCATTTTAAGTATTCCATCTTATT  350

seq1  CTTGGCTTTGTGCTTACAATAATGGTCTTCTGTTTTTTTCTTGACATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTTGTGCTTACAATAATGGTCTTCTGTTTTTTTCTTGACATAAA  400

seq1  AATGTAAGACAAAAGAAAAAAATCAAGCCAACAAGCTAACGGAGTGATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGACAAAAGAAAAAAATCAAGCCAACAAGCTAACGGAGTGATCA  450

seq1  CAGTTACTTTAACTCAGCCTCCCTGGTATAACCTACAAAACTCCTTTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTTTAACTCAGCCTCCCTGGTATAACCTACAAAACTCCTTTGAC  500

seq1  TATACTATCACTGGGACTAGGGAGGTGAAAGATCAGTTGTCCATCATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTATCACTGGGACTAGGGAGGTGAAAGATCAGTTGTCCATCATGCA  550

seq1  GAAAACATGGTCAGTTAAATCTGTGGTTTGAATATACTTGGCCCACGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATGGTCAGTTAAATCTGTGGTTTGAATATACTTGGCCCACGGGA  600

seq1  AGTGGCACTATTTAGAGGTGTGGCCTTGGTGGAGTAGGTATGGCCTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACTATTTAGAGGTGTGGCCTTGGTGGAGTAGGTATGGCCTTGTG  650

seq1  AGGGAAAATTCAACACTGTGGGGTTGGATTTTGAGGCTCTAAGCTGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAATTCAACACTGTGGGGTTGGATTTTGAGGCTCTAAGCTGAGGC  700

seq1  TCCACCCAGTGTTAAAGCGAGCCTCCTCTTGGCTGCCTGCAGAAGAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCAGTGTTAAAGCGAGCCTCCTCTTGGCTGCCTGCAGAAGAGTCT  750

seq1  GTTTTCTCCTGGCTGCCCTCTCATCAAGATGTAAAACTCTTGGCTCCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCCTGGCTGCCCTCTCATCAAGATGTAAAACTCTTGGCTCCCCA  800

seq1  ACACCAAGTCTGCCTGCATAC-TTCCATGCTTCCTCACTATGACTATAAT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACACCAAGTCTGCCTGCATACTTTCCATGCTTCCTCACTATGACTATAAT  850

seq1  GGACTGAGCCTCTGAAACTGTAAGCCAGACCCAATTAAGTGTTTACCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGCCTCTGAAACTGTAAGCCAGACCCAATTAAGTGTTTACCATT  900

seq1  ATACAAATTGTCTTGGTCATGGTGTCTC-TTCAGAGCAATAAAACACTAA  948
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATACAAATTGTCTTGGTCATGGTGTCTCTTTCAGAGCAATAAAACACTAA  950

seq1  -CTAAGACAGAGTTAAAACTA-GGATTT-GAAATGTCAC-ACAGAGTTCC  994
       ||| |||||||||||||||| |||||| |||||||||| ||||||||||
seq2  CCTAGGACAGAGTTAAAACTAGGGATTTGGAAATGTCACAACAGAGTTCC  1000

seq1  AAACAGAAAACTGCCCATCATTCATTCAGAATGTATCAGAGCCTGG--TA  1042
      |||||||||||||||||||||||||||||| |||||||||||||||   |
seq2  AAACAGAAAACTGCCCATCATTCATTCAGATTGTATCAGAGCCTGGGTAA  1050

seq1  TAG-CAGAGGTGCT-ACCATGCAGCTATAAACCAG-ATAGGTAAATCCAC  1089
      ||| |||||||||| ||||||||||||| || ||| |||||||||| |||
seq2  TAGCCAGAGGTGCTAACCATGCAGCTATTAAACAGAATAGGTAAAT-CAC  1099

seq1  TGCTTTCCCCTGGGCTTTCCGTCTAAATAGGAGCCATTCTTTCTTCACTC  1139
      |||||   ||||| | |||||||| |||||||  ||||| ||||||||||
seq2  TGCTT---CCTGGAC-TTCCGTCT-AATAGGAAGCATTCCTTCTTCACTC  1144

seq1  AACATGTACATCTGACTCATACGCTGCTGAACACATTAGTGCCAGCAAGT  1189
       ||||| ||||||||||||||||||||||||||| ||| || | || |||
seq2  -ACATG-ACATCTGACTCATACGCTGCTGAACAC-TTA-TGTCCGC-AGT  1189

seq1  ATCAGGAAGCTGAAGT-CACTGCAATACA-ACTGTATG  1225
      |||| || |||||||| |||||| ||| | ||||||||
seq2  ATCA-GAGGCTGAAGTACACTGCCATATATACTGTATG  1226


seq1: chr5_5305617_5306692
seq2: B6Ng01-184L07.g_64_1144 (reverse)

seq1  TTATAAGCAAACAGA-TGTGCACTGAGAGTGTAAGACAGCTGAACTTCCA  49
      |||||||| |||||| |||||||||||||||| |||||||||||||||| 
seq2  TTATAAGC-AACAGATTGTGCACTGAGAGTGT-AGACAGCTGAACTTCC-  47

seq1  ATCTACATTGGTTTTCTTTT-ACACTAACTATGATTATCTCTCATTATCC  98
      |||||||||||||||||||| ||||||||||||||  |||||   |||||
seq2  ATCTACATTGGTTTTCTTTTAACACTAACTATGATATTCTCTTCATATCC  97

seq1  TTTG-TCT-GTGTCCA-TCTCTGAG--TTCCCCACTCTTGGGGCAAAGAC  143
      |||| ||| ||||||| ||||||||  | |||||||||||||||||||||
seq2  TTTGTTCTGGTGTCCATTCTCTGAGGTTCCCCCACTCTTGGGGCAAAGAC  147

seq1  AA-TTTATAAACCAAATTGTAAGGAAGGAGTTCCACAAGGGACAGAGAGG  192
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAAACCAAATTGTAAGGAAGGAGTTCCACAAGGGACAGAGAGG  197

seq1  CCCAATGGCAGATGCCACTCTAACTTAGGTATTTGTTTAATTAAATGTAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGCAGATGCCACTCTAACTTAGGTATTTGTTTAATTAAATGTAA  247

seq1  TCACACTTTTAAAGGAAACTCTGTCCTCCCCTAGGTTCTATGTCTAGGAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTTTTAAAGGAAACTCTGTCCTCCCCTAGGTTCTATGTCTAGGAT  297

seq1  ATGGAGGATTTGAGAGAGGTCATCCTAGAAACTGAAGTCAAACTTGATTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGATTTGAGAGAGGTCATCCTAGAAACTGAAGTCAAACTTGATTC  347

seq1  TTAATAGTGTGGCCTTCCCTTGCATCATATACCCAGATTAACTCAAAATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGTGTGGCCTTCCCTTGCATCATATACCCAGATTAACTCAAAATG  397

seq1  GATCACTGTCTGAAATGTAAAAGCTAGAACTAGAAAAAAGCAAAAGTGTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGTCTGAAATGTAAAAGCTAGAACTAGAAAAAAGCAAAAGTGTA  447

seq1  GGTATACAAGATCACAAACTCGGCAATGGCTTCTTAGATATGAATCATTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACAAGATCACAAACTCGGCAATGGCTTCTTAGATATGAATCATTT  497

seq1  CCATGAAAAGCAAAGACGACAATGGGCAGCTGGACCCAATCAAAAATGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAAAGCAAAGACGACAATGGGCAGCTGGACCCAATCAAAAATGTT  547

seq1  AGTGCTTCTCGGCATATCAATATGAGATCAAAAGACAAGCCGGAAAATTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCTCGGCATATCAATATGAGATCAAAAGACAAGCCGGAAAATTG  597

seq1  AGGCAACTTTGCAGCTCATGTTTCTGATGTGAAACTAGCATCCATAATCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTTTGCAGCTCATGTTTCTGATGTGAAACTAGCATCCATAATCA  647

seq1  ATGATAGACCGCAAGTCAATAATATAAAAACAAGTCACTTAAAGCCTATG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGACCGCAAGTCAATAATATAAAAACAAGTCACTTAAAGCCTATG  697

seq1  CCTCAGCCAGCACACCTCTGACCCCAGCACTAGGGAGACAGAGACAAAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCAGCACACCTCTGACCCCAGCACTAGGGAGACAGAGACAAAGG  747

seq1  CAGGCAGAACCCTGACTTTGAAGCCAGCTTGCTCTTCAAAGTGAGTTCCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAACCCTGACTTTGAAGCCAGCTTGCTCTTCAAAGTGAGTTCCA  797

seq1  GAGCTGTCTCAAAAGGGGGGAGGGGGAGGAGAAGGAAGAAGAGGAGGAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTCTCAAAAGGGGGGAGGGGGAGGAGAAGGAAGAAGAGGAGGAAA  847

seq1  AGGAGGAAGAAGAGAAGAAAGAAGAAAAAAAGAAAAAAGGAAGAATAAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGAAGAGAAGAAAGAAGAAAAAAAGAAAAAAGGAAGAATAAAA  897

seq1  ATAAAAGCAAATGCAAAATATGTATGCCTCCACAGAAGCTGGACAACAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCAAATGCAAAATATGTATGCCTCCACAGAAGCTGGACAACAGC  947

seq1  CGATGTCAAAATGAAGTGGTGTTTAATCACTAATCAATATAGAAATGGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTCAAAATGAAGTGGTGTTTAATCACTAATCAATATAGAAATGGAA  997

seq1  GTCAAGCCCAGGAACACTTCCCTTCCAGTGTGATGGACAACATCAGACAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCCCAGGAACACTTCCCTTCCAGTGTGATGGACAACATCAGACAA  1047

seq1  CAGGCATCAAAAAAGATGTGGAAAACCAGAATTC  1076
      ||||||||||||||||||||||||||||||||||
seq2  CAGGCATCAAAAAAGATGTGGAAAACCAGAATTC  1081


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