MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-185J12
Chromosome	5 (Build37)
Map Location	73,867,758 - 73,868,714
singlet/doublet	singlet
Overlap gene	LOC627733
Upstream gene	Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2, Slc10a4, LOC667127, Fryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik
Downstream gene	Dcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik, Rasl11b, Scfd2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Corin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53419 MGI:1349451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nfxl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100978 MGI:1923646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zar1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:317755 MGI:2180337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545758 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545758 MGI:3645333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnga1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12788 MGI:88436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 9 Proteins pseudo : _no_value

name	Npal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70701 MGI:1917951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22165 MGI:102960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tec (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21682 MGI:98662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slain2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75991 MGI:1923241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231290 MGI:3606480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667127 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 2 Proteins pseudo : _no_value

name	Fryl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72313 MGI:1919563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ociad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68095 MGI:1915345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ociad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433904 MGI:1916377
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100042205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	C130090K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231293 MGI:2444131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC627733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins pseudo : _no_value

name	Dcun1d4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100737 MGI:2140972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC031901 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231296 MGI:2387634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgcb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24051 MGI:1346523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spata18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73472 MGI:1920722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 3 Proteins

name	Usp46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69727 MGI:1916977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2700023E23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70036 MGI:1917286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs

name	Rasl11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68939 MGI:1916189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scfd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212986 MGI:2443446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Corin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374600 GeneID:53419 MGI:1349451
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corin transcript_id : NM_016869.2

name	Nfxl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301200 GeneID:100978 MGI:1923646
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear transcription factor, X-box binding-like 1 transcript_id : NM_133921.2

name	Zar1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341332 GeneID:317755 MGI:2180337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zygote arrest 1 transcript_id : NM_174877.2

name	EG545758 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352023 GeneID:545758 MGI:3645333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545758 transcript_id : NM_001024147.2

name	Cnga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181172 GeneID:12788 MGI:88436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclic nucleotide gated channel alpha 1 transcript_id : NM_007723.2

name	Npal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487088 GeneID:70701 MGI:1917951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIPA-like domain containing 1 transcript_id : NM_001081205.1

name	Txk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305600 GeneID:22165 MGI:102960
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TXK tyrosine kinase transcript_id : NM_013698.1

name	Tec (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253945 GeneID:21682 MGI:98662
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic tyrosine kinase, Dscr28C related (Drosophila) transcript_id : NM_013689.4

name	Slain2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956355 GeneID:75991 MGI:1923241
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLAIN motif family, member 2 transcript_id : NM_153567.1

name	Slc10a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87044891 GeneID:231290 MGI:3606480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 4 transcript_id : NM_173403.2

name	Fryl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964715 GeneID:72313 MGI:1919563
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : furry homolog-like (Drosophila) transcript_id : NM_028194.2

name	Fryl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964713 GeneID:72313 MGI:1919563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : furry homolog-like (Drosophila) transcript_id : NM_177136.3

name	Ociad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356968 GeneID:68095 MGI:1915345
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OCIA domain containing 1 transcript_id : NM_023429.3

name	Ociad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326513 GeneID:433904 MGI:1916377
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OCIA domain containing 2 transcript_id : NM_026950.3

name	LOC100042205 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253939 GeneID:100042205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to CG31439-PA transcript_id : XM_001477718.1

name	C130090K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342193 GeneID:231293 MGI:2444131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130090K23 gene transcript_id : NM_181323.2

name	C130090K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130159 GeneID:231293 MGI:2444131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130090K23 gene transcript_id : NM_145560.2

name	Dcun1d4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358031 GeneID:100737 MGI:2140972
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) transcript_id : NM_178896.3

name	BC031901 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956357 GeneID:231296 MGI:2387634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC031901 transcript_id : NM_153568.1

name	Sgcb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801718 GeneID:24051 MGI:1346523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcoglycan, beta (dystrophin-associated glycoprotein) transcript_id : NM_011890.4

name	Spata18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253953 GeneID:73472 MGI:1920722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 3 Proteins product : spermatogenesis associated 18 transcript_id : XM_001479212.1

name	Usp46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130433 GeneID:69727 MGI:1916977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 46 transcript_id : NM_177561.3

name	2700023E23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374810 GeneID:70036 MGI:1917286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs product : RIKEN cDNA 2700023E23 gene transcript_id : XM_884008.2

name	Rasl11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625707 GeneID:68939 MGI:1916189
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-like, family 11, member B transcript_id : NM_026878.1

name	Scfd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803222 GeneID:212986 MGI:2443446
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sec1 family domain containing 2 transcript_id : NM_178672.4

name	Corin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394057 CCDS:CCDS19330.1 GeneID:53419 MGI:1349451
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein-related protein 4 product : corin protein_id : NP_058565.1

name	Nfxl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124301201 GeneID:100978 MGI:1923646
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ovarian zinc finger protein protein_id : NP_598682.2

name	Zar1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27883860 CCDS:CCDS19331.1 GeneID:317755 MGI:2180337
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : zygote arrest 1 protein_id : NP_777366.1

name	EG545758 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701520 GeneID:545758 MGI:3645333
definition	codon_start : 1 product : hypothetical protein LOC545758 protein_id : NP_001019318.1

name	Cnga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181173 CCDS:CCDS19333.1 GeneID:12788 MGI:88436
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0001750 - photoreceptor outer segment [Evidence IDA] GO_function : GO:0030553 - cGMP binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : cyclic nucleotide gated channel, cGMP gated product : cyclic nucleotide gated channel alpha 1 protein_id : NP_031749.2

name	Npal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487089 GeneID:70701 MGI:1917951
definition	codon_start : 1 product : NIPA-like domain containing 1 protein_id : NP_001074674.1

name	Txk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305601 CCDS:CCDS19334.1 GeneID:22165 MGI:102960
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : TXK tyrosine kinase protein_id : NP_038726.1

name	Tec (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305569 GeneID:21682 MGI:98662
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cytoplasmic tyrosine kinase, Dscr28C related protein_id : NP_038717.1

name	Slain2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956356 CCDS:CCDS19335.1 GeneID:75991 MGI:1923241
definition	codon_start : 1 product : SLAIN motif family, member 2 protein_id : NP_705795.1

name	Slc10a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87044892 CCDS:CCDS19336.1 GeneID:231290 MGI:3606480
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008508 - bile acid:sodium symporter activity [Evidence IEA] GO_process : GO:0006814 - sodium ion transport [Evidence IEA] codon_start : 1 product : solute carrier family 10 (sodium/bile acid cotransporter family), member 4 protein_id : NP_775579.2

name	Fryl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964716 CCDS:CCDS19337.1 GeneID:72313 MGI:1919563
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : furry homolog-like isoform 1 protein_id : NP_082470.2

name	Fryl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964714 CCDS:CCDS19338.1 GeneID:72313 MGI:1919563
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : furry homolog-like isoform 2 protein_id : NP_796110.2

name	Ociad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963675 CCDS:CCDS19339.1 GeneID:68095 MGI:1915345
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : OCIA domain containing 1 protein_id : NP_075918.1

name	Ociad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58219050 CCDS:CCDS19340.1 GeneID:433904 MGI:1916377
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : OCIA domain containing 2 protein_id : NP_081226.1

name	LOC100042205 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253940 GeneID:100042205
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477768.1

name	C130090K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704104 CCDS:CCDS19341.1 GeneID:231293 MGI:2444131
definition	codon_start : 1 product : hypothetical protein LOC231293 protein_id : NP_663535.1

name	C130090K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044463 CCDS:CCDS19341.1 GeneID:231293 MGI:2444131
definition	codon_start : 1 product : hypothetical protein LOC231293 protein_id : NP_851840.1

name	Dcun1d4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725746 CCDS:CCDS19342.1 GeneID:100737 MGI:2140972
definition	codon_start : 1 product : DCN1, defective in cullin neddylation 1, domain containing 4 protein_id : NP_849227.1

name	BC031901 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956358 CCDS:CCDS19343.1 GeneID:231296 MGI:2387634
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC231296 protein_id : NP_705796.1

name	Sgcb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755482 CCDS:CCDS19344.1 GeneID:24051 MGI:1346523
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0016012 - sarcoglycan complex [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016044 - membrane organization and biogenesis [Evidence TAS] codon_start : 1 note : sarcoglycan, beta (43kD dystrophin-associated glycoprotein); beta-sarcoglycan product : sarcoglycan, beta (dystrophin-associated glycoprotein) protein_id : NP_036020.1

name	Spata18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253954 GeneID:73472 MGI:1920722
definition	codon_start : 1 product : spermatogenesis associated 18 homolog protein_id : XP_001479262.1

name	Usp46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243896 GeneID:69727 MGI:1916977
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 46 protein_id : NP_808229.1

name	2700023E23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374811 GeneID:70036 MGI:1917286
definition	codon_start : 1 product : hypothetical protein LOC70036 protein_id : XP_889101.2

name	Rasl11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625708 GeneID:68939 MGI:1916189
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : RAS-like family 11 member B protein_id : NP_081154.1

name	Scfd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982305 CCDS:CCDS19345.1 GeneID:212986 MGI:2443446
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IEA] codon_start : 1 product : sec1 family domain containing 2 protein_id : NP_848787.2

name	LOC384275 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253951 GeneID:384275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 9 Proteins product : similar to ErbB3-binding protein 1 pseudo : _no_value transcript_id : XR_034013.1

name	LOC667127 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:94374797 GeneID:667127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 2 Proteins product : similar to zygote arrest 1 pseudo : _no_value transcript_id : XR_001979.1

name	LOC667154 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253934 GeneID:667154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_033359.1

name	LOC627733 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253952 GeneID:627733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_034092.1

clone name	MSMg01-341I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-406N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-185J12.b	B6Ng01-185J12.g
ACC	GA010663	GA010664
length	977	969
definition	B6Ng01-185J12.b	B6Ng01-185J12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgttagaactctggcaaacgatgccttcaaaacaggaaggattc gacaccgcacacgtaatgtgtggatctgactggacatcatagtcatttta tccagtccgttcgtgatgtgagctcacggcctgctgtccacatacacttg aagtttgccccagattggtgccctgaaacaccccttgcggttctccgatt ctgactagggtaggccacacaaccttgaatcccatctccgaggggaggag ttagtgagacgcgcagcttggggtgtgtcccaacttccgacctgcccttt tctcttgcttttctgctcatacgtctaatgataacgtctagataatgcag atgctccctggtctatagtcaccataaatccatcacaggtcacaaatacc gcaagtcaaaaatgcatttatatacacctcttggagttccaatagtaaat gactcccaccaaagacccatgtgtttgaacacttgggtcctttggtgaca ctgattgagaaggtcacagaaatttttaaagaaaacaaaaatcttgctga aggaagcacatcactggggcggggtttaggtttcttgcctttctttcaaa gcttggatgccaggtattcagcccgctgcctgcctgtggccacgccccct cccccagcctcagtgagctccagccctgtggaactgtgagccaaatccct ttttatccttacgttggttttactaagatagtttatcacaacaacagaaa agaaactaaccaggtacataatccaccagcattgatgcttggcccacctt cccttagaccttctcaggacacttatattagcaggtagcttgaagaaagc catggaacacaaagtccgttttctgataaacgttgggtagatatctcatg taacatcgaacacaatacctgaatgtgtgaaccagtggtcgtgggacacc attgtaattatcataatactaatcata	gaattcctgataaagagacttggtagacacagtgtctttccagaggtcag gggtcaggtagctgtaggtcttggagatggcctaggcaaaattgtaggtc ttggaggtagccttggcaaaattgcctagggtggcagtgtagcctctgtc tgaaatgtagcagtcatctatactggctatcatcagtagcttcttgggca cagaagcagagacaatgccagtgcctctggggacagggatgagacccact agcacagagtcatagcggcctgtcaccttgcatggaacagtgtggggctt gccaatcttgttccccaagtagcctctccacacagggatgatggaaagct tggccaaaatgaacggcccctcggatggcagtggtaacctccttggagca cttaaggcctagaccaatgtgaccattgtagtccccaatagtgacgaatg ccttgaacctggtccgctggccagcgcgagtctgcttctgcactggtgtg attttcagaaactcatcctttagggatgcacccaggaaaacgtcaatgat ctcagactccttaatgggcatggagaacaggtagatctcctccagggact tgatcttcatgtccttaaccaggcggcccagcttggtgacagggatctac tccttgtcttcagctttacctccacgagccccgcagccttcgaccacggc caccatccttgaccacgaccacagcccctaagactgctgcttggatcctc tgtggaagcggtagaagccattgtggccctccttatcctgggtccccggg tcctccgggccctcctgctgcaccggtgtcatccgccatttagtgtttcc tggaagatgtattctattctatttatttagtttaatagatataccatgtt gccaggaacatttctatgtcctaagtggatcctgcgttttttggtcattt cttggttatgtgaccaacg
quality values	Open. Hide. 9 13 9 9 13 17 29 31 44 44 40 37 44 48 47 62 52 52 62 47 47 46 56 62 47 56 62 47 62 62 62 62 51 31 17 19 21 21 27 20 20 34 33 32 38 49 16 21 59 59 59 59 62 62 62 62 62 59 59 59 59 62 51 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 62 56 26 56 51 59 59 56 62 62 56 54 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 59 59 59 59 59 59 56 59 62 62 59 59 59 54 56 59 62 62 62 54 62 62 62 62 62 59 62 56 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 59 62 59 51 59 54 56 62 56 54 54 59 62 62 62 62 62 62 62 62 62 62 62 59 59 56 43 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 59 54 56 59 43 59 49 62 62 62 62 62 62 59 62 54 59 62 62 62 62 59 56 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 62 50 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 50 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 42 62 62 56 56 44 56 62 56 47 56 56 51 56 56 56 56 56 47 44 62 47 62 56 49 56 56 43 51 62 47 54 62 62 51 51 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 47 47 56 56 62 62 62 56 54 62 62 54 56 56 62 47 42 56 56 39 54 42 62 62 62 56 52 62 54 54 54 54 54 46 52 52 52 52 52 62 62 62 62 52 43 46 43 40 52 52 62 38 38 52 34 47 46 58 54 39 58 52 52 40 40 50 52 42 52 42 48 45 41 45 48 47 43 52 44 52 52 54 40 54 54 54 54 45 54 45 48 52 54 58 58 39 44 44 52 45 54 26 58 54 52 27 46 48 52 52 51 49 54 37 41 42 54 41 43 50 42 32 32 41 38 38 50 42 41 51 52 40 40 42 35 33 22 23 26 37 42 51 53 51 50 51 42 36 54 50 51 50 49 51 58 58 58 58 46 54 58 46 58 50 39 53 51 53 53 50 50 50 50 58 32 49 49 32 51 40 49 39 32 32 39 51 30 22 44 58 50 35 53 58 53 51 54 50 40 31 25 58 50 50 39 58 49 28 58 50 49 12 20 28 54 40 51 37 53 42 38 39 54 50 28 23 54 54 39 33 39 24 12 38 26 51 28 26 32 40 54 23 52 39 40 32 34 23 41 38 19 30 39 22 28 54 40 41 40 25 42 41 40 41 37 37 34 41 34 40 12 16 24 31 37 22 51 23 37 28 28 34 42 37 33 7 7 11 27 31 30 37 35 36 40 28 18 53 32 52 39 52 33 31 45 32 33 15 15 42 32 20 32 37 25 25 20 32 45 20 31 34 18 15 14 34 32 26 31 22 15 27 30 30 36 35 6 9 29 34 11 8 31 21 41 26 34 29 29 28 14 27 18 30 45 24 17 17 25 19 33 24 25 23 25 31 20 31 30 38 37 31 24 37 34 32 25 40 46 31 32 31 29 31 25 42 46 40 29 13 17 12 31 32 20 12 30 21 39 13 16 27 29 30 25 30 30 41 22 18 16 31 30 41 41 26 34 23 11 11 24 12 13 17 26 10 21 26 27 26 22 32 37 27 32 29 20 18 20 15 8 5 5 15 15 14 38 25 19 38 35 32 27 29 11 6 12 29 31 32 12 44 7 5 13 6 31 38 13 17 35 14 6 21 10 7 6 17 17 12 20 5 7 10 10	Open. Hide. 56 62 26 39 62 51 56 56 62 59 59 51 34 13 10 18 13 16 16 29 28 28 25 21 23 29 46 43 59 62 62 62 59 62 62 62 62 62 62 62 62 49 56 62 59 62 59 59 59 56 62 59 46 50 50 51 49 62 59 30 23 34 39 34 22 27 24 48 28 31 34 45 56 56 54 46 59 59 62 62 59 62 62 62 46 62 59 59 62 62 50 50 50 56 49 43 40 54 40 35 35 54 62 56 59 43 54 36 46 46 56 54 62 59 59 56 46 46 56 56 51 51 62 62 59 59 59 59 59 62 62 59 59 62 62 62 62 62 59 49 49 40 56 59 43 48 56 59 51 51 62 59 62 59 56 59 62 51 46 27 46 51 34 43 62 39 43 46 40 43 51 49 56 56 56 62 59 59 62 62 59 59 62 62 59 51 59 62 59 62 54 62 62 59 62 59 50 50 46 50 56 54 46 62 59 49 59 59 51 62 46 59 62 59 62 62 62 59 59 49 56 56 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 54 54 59 59 62 51 59 59 59 59 56 59 59 59 46 49 50 56 49 34 56 36 46 50 34 59 50 40 50 59 59 51 62 62 59 59 62 56 59 62 62 62 62 59 59 59 62 54 56 59 59 56 38 50 62 46 62 54 62 62 50 59 56 62 50 50 51 23 26 23 17 18 31 54 59 62 62 62 62 62 62 59 56 59 51 59 59 59 62 59 59 59 51 59 49 43 41 39 48 35 28 54 54 54 49 56 48 50 49 50 46 43 56 51 59 40 41 51 43 51 49 56 50 59 56 59 59 59 62 51 51 59 59 56 59 43 40 59 49 62 59 51 59 56 59 62 59 59 62 62 62 59 62 62 62 62 62 62 59 46 34 43 31 39 45 62 51 62 59 62 59 62 62 62 51 62 59 59 56 51 59 59 51 43 44 43 43 24 50 59 62 34 39 30 39 43 39 51 51 45 43 45 43 51 51 59 59 44 30 56 56 56 56 56 56 51 56 62 56 32 28 31 31 37 22 32 44 56 44 44 44 44 56 42 56 51 42 51 51 33 33 39 51 42 51 62 62 56 62 47 54 62 42 34 11 11 14 20 13 10 41 37 56 54 20 47 56 56 56 38 28 62 56 56 62 47 62 56 62 56 62 56 62 56 37 20 43 46 43 56 56 56 46 32 43 50 38 27 28 52 46 47 33 42 34 42 52 39 43 54 62 54 54 42 33 42 34 25 52 54 62 54 43 62 62 42 43 54 62 38 9 10 13 11 17 16 52 32 41 42 34 29 28 43 40 42 30 45 52 31 54 52 52 54 42 54 42 39 52 54 36 34 54 54 50 42 39 37 46 39 50 28 53 58 54 46 50 35 29 39 50 42 35 38 27 27 30 42 39 27 52 42 29 15 47 42 26 39 50 35 42 34 20 35 43 58 48 51 49 34 41 25 27 49 48 21 20 25 54 41 51 52 39 39 10 20 32 42 52 42 50 34 53 42 39 34 27 35 27 43 12 32 42 33 28 29 25 35 30 46 25 7 10 15 21 40 35 31 27 29 16 25 9 37 31 39 29 19 10 23 19 23 51 48 46 39 51 38 23 6 19 6 15 13 40 13 13 12 40 37 28 28 37 36 23 36 28 30 52 37 41 42 28 28 7 13 17 17 26 25 22 22 31 23 18 16 15 14 23 25 11 26 17 18 11 20 26 35 30 14 20 25 32 32 27 40 16 31 39 7 37 19 28 21 41 23 9 21 24 14 12 21 35 31 24 23 23 19 21 19 20 33 33 40 38 19 31 20 30 17 32 37 16 31 32 29 14 33 47 30 32 40 33 18 32 26 26 26 17 23 33 6 18 20 35 45 21 28 31 31 32 45 45 29 10 22 13 15 14 17 28 12 25 11 9 9 12 14 9 11 9 12 10 18 5 5 9 5 5 15 9 22 6 8 51 51 7 21 10 51 31 21 11 12 35 13 11 20 9 6 11 18 23 29 8 28 17 19 8 7 38 19 8 8 17 21 30 22 24 35 32 15 8 21 29 19 31 31 27 6 6 10 9 12 25 12 13 8 13 13 9 31 8 20 27 31 21 5 6 6 7 15 21 31 30 9 17 7 20 20 9 29 31 25 25 27 11 10 5 6 15 5 7 10 6 9 19 14 8 7 5 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_73867758_73868714
seq2: B6Ng01-185J12.g_70_1038

seq1  GAATTCCTGATAAAGAGACTTGGTAGACACAGTGTCTTTCCAGAGGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATAAAGAGACTTGGTAGACACAGTGTCTTTCCAGAGGTCAG  50

seq1  GGGTCAGGTAGCTGTAGGTCTTGGAGATGGCCTAGGCAAAATTGTAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGGTAGCTGTAGGTCTTGGAGATGGCCTAGGCAAAATTGTAGGTC  100

seq1  TTGGAGGTAGCCTTGGCAAAATTGCCTAGGGTGGCAGTGTAGCCTCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGTAGCCTTGGCAAAATTGCCTAGGGTGGCAGTGTAGCCTCTGTC  150

seq1  TGAAATGTAGCAGTCATCTATACTGGCTATCATCAGTAGCTTCTTGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTAGCAGTCATCTATACTGGCTATCATCAGTAGCTTCTTGGGCA  200

seq1  CAGAAGCAGAGACAATGCCAGTGCCTCTGGGGACAGGGATGAGACCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAGAGACAATGCCAGTGCCTCTGGGGACAGGGATGAGACCCACT  250

seq1  AGCACAGAGTCATAGCGGCCTGTCACCTTGCATGGAACAGTGTGGGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGTCATAGCGGCCTGTCACCTTGCATGGAACAGTGTGGGGCTT  300

seq1  GCCAATCTTGTTCCCCAAGTAGCCTCTCCACACAGGGATGATGGAAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCTTGTTCCCCAAGTAGCCTCTCCACACAGGGATGATGGAAAGCT  350

seq1  TGGCCAAAATGAACGGCCCCTCGGATGGCAGTGGTAACCTCCTTGGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAAATGAACGGCCCCTCGGATGGCAGTGGTAACCTCCTTGGAGCA  400

seq1  CTTAAGGCCTAGACCAATGTGACCATTGTAGTCCCCAATAGTGACGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGCCTAGACCAATGTGACCATTGTAGTCCCCAATAGTGACGAATG  450

seq1  CCTTGAACCTGGTCCGCTGGCCAGCGCGAGTCTGCTTCTGCACTGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACCTGGTCCGCTGGCCAGCGCGAGTCTGCTTCTGCACTGGTGTG  500

seq1  ATTTTCAGAAACTCATCCTTTAGGGATGCACCCAGGAAAACGTCAATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGAAACTCATCCTTTAGGGATGCACCCAGGAAAACGTCAATGAT  550

seq1  CTCAGACTCCTTAATGGGCATGGAGAACAGGTAGATCTCCTCCAGGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTCCTTAATGGGCATGGAGAACAGGTAGATCTCCTCCAGGGACT  600

seq1  TGATCTTCATGTCCTTAACCAGGCGGCCCAGCTTGGTGACAGGGATCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCATGTCCTTAACCAGGCGGCCCAGCTTGGTGACAGGGATCTAC  650

seq1  TCCTTGTCTTCAGCTTTACCTCCACGAGCCCCGCAGCC-TCGACCACGGC  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCCTTGTCTTCAGCTTTACCTCCACGAGCCCCGCAGCCTTCGACCACGGC  700

seq1  CACCA-CCTTGACCACGACCACAGCCCCTAAGACTGCTGC-TGGATCCTC  747
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  CACCATCCTTGACCACGACCACAGCCCCTAAGACTGCTGCTTGGATCCTC  750

seq1  TGTGGAAGCGGTAGAAGCCATTGTGG-CCTCCTAATCCTGGGTCCCCGGG  796
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TGTGGAAGCGGTAGAAGCCATTGTGGCCCTCCTTATCCTGGGTCCCCGGG  800

seq1  TCCTCCGGGCCCTCCTGCTGCACCGGTGTCATCCGCCATTTAGTGTTTTC  846
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCTCCGGGCCCTCCTGCTGCACCGGTGTCATCCGCCATTTAGTGTTTCC  850

seq1  TGGAAGAAG-AAGCCATCC--ATTAATTAG-TTAATAGATAAACAATGTT  892
      ||||||| | |  | || |   ||| |||| |||||||||| || |||||
seq2  TGGAAGATGTATTCTATTCTATTTATTTAGTTTAATAGATATACCATGTT  900

seq1  GCCAGGAACATTTCTATGTTCTTAAGT-GAACCTGTGTTTTT--GTCA-T  938
      |||||||||||||||||| || ||||| || |||| ||||||  |||| |
seq2  GCCAGGAACATTTCTATG-TCCTAAGTGGATCCTGCGTTTTTTGGTCATT  949

seq1  TCTTGGTTATGT-ACCAAGG  957
      |||||||||||| ||||| |
seq2  TCTTGGTTATGTGACCAACG  969

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information