BAC Information

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BAC

Clone NameB6Ng01-186F02
Chromosome5 (Build37)
Map Location 83,352,305 - 83,353,477
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433912
Downstream geneLOC100039434, Srd5a2l2, LOC100039608, LOC231368
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186F02.bB6Ng01-186F02.g
ACCGA011193GA011194
length1,1831,141
definitionB6Ng01-186F02.b B6Ng01-186F02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtatctctgtgtgtacatgtgcttttgaatctcaagatacaca
tgtgtgataattaattgttgtttgaaagagtattaaatacgtggacttca
tatatctgtatgatatattcatattttattcatcattctatgaagttatg
gtttcttagctcggtttagtacaccaatatgaaaatgaatctaattcaaa
aaatcatttctttaaaaatttaatgaagattataagaagatatactacac
aaaaattcagtatataataaggattatttgacgtctttgtagcttcatat
tggcaatttaacataaaaattaacctaataacattttgatattttatttc
actatgtagcttcaactgaccagtaaatcaaagcaaacttcgcatctcag
ccctccaagtttgtgagccactatgcctaacatttataaaagttttatac
tgactacagtaagaacttgacaaatcatagatagaagaaacaattcacac
taaaataaaattatgttctggagaagtttaaccctcttttacaaaaccaa
atgagttaatttctcttaaagagaaagaatatttattaatgcagtgaaaa
gggactatggtgaacacatgaagaatctggaatattaaaatccccagttt
ttatcctagactttcaagctcaaagaactgtgacaaatacatttcaattt
aaaatgtcatccattctaagaaatgaagtcattgccataaaaatacactt
gatggtttacatgaatatataatttcatagtggttacaaatattttctct
aacagtaatttgcataatattttacatgtgtagtcattaaattattctta
acttagttgaaacagtaaatgtattcattataatggctgtattatttagg
tcaatgatttctttctttttaagcactttattatgtttctttttttaaca
ctccataatttattcctgccctttcaccaaccaccctctgactgttccac
atcccatacttcctccccactcccctgtctctacatgggatgtccccaat
gcaaccccactgacctctaactccctggggcccctagttcttttgagggt
taggtgcatcatcttctgattgaacacagacctggcagttccctcaactg
gtatattgtgttgaagggatcctcatattcagc

gaattctctatgtggtgtgtgtgttatcctctgcaagggggctgtagctg
tcagtttgaggaaagcaacccttttgtcttagcaatggacttagttgttt
tggaatttgcgtagaacctcattggttgacaagtcagttaaatgcaaccc
aagccctgctgctggaagccttacctggcaagaagagttggtgagctgaa
attctgtatcccccattattaggaatctgcattagggtcaccttcataaa
tccaggaagtttccactgcatttggtttctaactgcatggcccccaccaa
atgttctccaattccagtggtccagctaaaaatgtctctctccatgtctg
gtcccctttgataagcacctatccactcctgcatatacttctatgcatcc
ctagtcagtctgtaaaatctattaaattcattctataatatttatttgtg
tgtcctcctagaagactctttgcctaatttatatatgtatatgaattaca
gcttggttatcatccacttaatgggtaatatccatgtataatgcatacat
acacatgtaattttctagaactgcatttcttctctcccgataattttttt
ctacttacgtccatttgcctgaagatttcatgatagtttttttttaaata
gatgtgtaatattaaattgtataaatgtactccattttcttcatcaattt
ttctgttaaaggacatttagtttcgtttcagattctggctattattaata
aagccataatgaacatggttgagcaaatatcttcttggtaagatggagtg
ccctttgggtataggcccaagagttgtatagctgcatcttgaggaagata
aatttcatctgcctcagatatcagtacactgatttccaaagtggctaata
caagtttatacctccccaccccacaaagggaagaatagtccccttcatgt
cctcttcagcattagctgttacttgtgttattgattttaggcattctgat
cctgtgaaacatgaatcccaagttgcttttgaatttgcattctatcaacc
cttaatctttatatttctggaactagactttcctttcactacttcttcta
caatatttgtcttaatctctctgaagaggaggtaatcacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_83352305_83353477
seq2: B6Ng01-186F02.b_46_1228 (reverse)

seq1  GCTG-ATATGAG---ACCCTCAACAC-ATATA-CAGTTGAGG--ACTTCC  42
      |||| |||||||    || ||||||| ||||| |||||||||  ||| ||
seq2  GCTGAATATGAGGATCCCTTCAACACAATATACCAGTTGAGGGAACTGCC  50

seq1  AGGTCTGTGTTCATTCAG-AGATGATGCACCTAACCCTCAAAAG-ACTAG  90
      ||||||||||||| |||| ||||||||||||||||||||||||| |||||
seq2  AGGTCTGTGTTCAATCAGAAGATGATGCACCTAACCCTCAAAAGAACTAG  100

seq1  GGGCCCCAGGGAGTTTAGAGGTCAGGTGGGGTTGCATTGGGGACAT-CCA  139
      ||||||||||||| |||||||||| ||||||||||||||||||||| |||
seq2  GGGCCCCAGGGAG-TTAGAGGTCA-GTGGGGTTGCATTGGGGACATCCCA  148

seq1  TGTAGAGACAGGGGAGTGGGGAGGAAGTATGGGATGTGGAACAGTCAGAG  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGACAGGGGAGTGGGGAGGAAGTATGGGATGTGGAACAGTCAGAG  198

seq1  GGTGGTTGGTG-AAGGGCAGGAATAAATTATGGAGTGTTAAAAAAAGAAA  238
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGGTGAAAGGGCAGGAATAAATTATGGAGTGTTAAAAAAAGAAA  248

seq1  CATAATAAAGTGCTTAAAAAGAAAGAAATCATTGACCTAAATAATACAGC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAAAGTGCTTAAAAAGAAAGAAATCATTGACCTAAATAATACAGC  298

seq1  CATTATAATGAATACATTTACTGTTTCAACTAAGTTAAGAATAATTTAAT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAATGAATACATTTACTGTTTCAACTAAGTTAAGAATAATTTAAT  348

seq1  GACTACACATGTAAAATATTATGCAAATTACTGTTAGAGAAAATATTTGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACACATGTAAAATATTATGCAAATTACTGTTAGAGAAAATATTTGT  398

seq1  AACCACTATGAAATTATATATTCATGTAAACCATCAAGTGTATTTTTATG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTATGAAATTATATATTCATGTAAACCATCAAGTGTATTTTTATG  448

seq1  GCAATGACTTCATTTCTTAGAATGGATGACATTTTAAATTGAAATGTATT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACTTCATTTCTTAGAATGGATGACATTTTAAATTGAAATGTATT  498

seq1  TGTCACAGTTCTTTGAGCTTGAAAGTCTAGGATAAAAACTGGGGATTTTA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTTCTTTGAGCTTGAAAGTCTAGGATAAAAACTGGGGATTTTA  548

seq1  ATATTCCAGATTCTTCATGTGTTCACCATAGTCCCTTTTCACTGCATTAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAGATTCTTCATGTGTTCACCATAGTCCCTTTTCACTGCATTAA  598

seq1  TAAATATTCTTTCTCTTTAAGAGAAATTAACTCATTTGGTTTTGTAAAAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTCTTTCTCTTTAAGAGAAATTAACTCATTTGGTTTTGTAAAAG  648

seq1  AGGGTTAAACTTCTCCAGAACATAATTTTATTTTAGTGTGAATTGTTTCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAAACTTCTCCAGAACATAATTTTATTTTAGTGTGAATTGTTTCT  698

seq1  TCTATCTATGATTTGTCAAGTTCTTACTGTAGTCAGTATAAAACTTTTAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATGATTTGTCAAGTTCTTACTGTAGTCAGTATAAAACTTTTAT  748

seq1  AAATGTTAGGCATAGTGGCTCACAAACTTGGAGGGCTGAGATGCGAAGTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAGGCATAGTGGCTCACAAACTTGGAGGGCTGAGATGCGAAGTT  798

seq1  TGCTTTGATTTACTGGTCAGTTGAAGCTACATAGTGAAATAAAATATCAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGATTTACTGGTCAGTTGAAGCTACATAGTGAAATAAAATATCAA  848

seq1  AATGTTATTAGGTTAATTTTTATGTTAAATTGCCAATATGAAGCTACAAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTAGGTTAATTTTTATGTTAAATTGCCAATATGAAGCTACAAA  898

seq1  GACGTCAAATAATCCTTATTATATACTGAATTTTTGTGTAGTATATCTTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCAAATAATCCTTATTATATACTGAATTTTTGTGTAGTATATCTTC  948

seq1  TTATAATCTTCATTAAATTTTTAAAGAAATGATTTTTTGAATTAGATTCA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCTTCATTAAATTTTTAAAGAAATGATTTTTTGAATTAGATTCA  998

seq1  TTTTCATATTGGTGTACTAAACCGAGCTAAGAAACCATAACTTCATAGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATTGGTGTACTAAACCGAGCTAAGAAACCATAACTTCATAGAA  1048

seq1  TGATGAATAAAATATGAATATATCATACAGATATATGAAGTCCACGTATT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATAAAATATGAATATATCATACAGATATATGAAGTCCACGTATT  1098

seq1  TAATACTCTTTCAAACAACAATTAATTATCACACATGTGTATCTTGAGAT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCTTTCAAACAACAATTAATTATCACACATGTGTATCTTGAGAT  1148

seq1  TCAAAAGCACATGTACACACAGAGATACAGAATTC  1173
      |||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCACATGTACACACAGAGATACAGAATTC  1183


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