BAC Information

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BAC

Clone NameB6Ng01-190M21
Chromosome5 (Build37)
Map Location 4,784,111 - 4,784,727
singlet/doubletsinglet
Overlap genenone
Upstream geneAnkib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073, Fzd1, LOC667678
Downstream genePftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190M21.bB6Ng01-190M21.g
ACCGA014470GA014471
length6171,158
definitionB6Ng01-190M21.b B6Ng01-190M21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagtgacgtgactggattacatatatatatatatatatatat
atatatatatataaaacaaagaatggactatggaatgaattgctgttaaa
ccatctctcatggacgttttatatataaatctactttacatcaataggaa
tgtttacatttgtttgtgtttcacagcttgtaaaaggtgggttaaaacac
acacacacaaacacacacacagagagagagaggcattaaaaacattcaaa
actaaaaatacaggagctgggtagatgacttggtggttcaggtacttgct
atacaagtgtgaggattagaatttagttcctccaaaacccatattgggtg
ggcaggatgagagatctgtaattccagtcttagaatttggagatgagtga
tcactagggcaatctggcaagctagactagtcatataggcaagctctaca
tttggttgagaaaccctgcatcaatcaaaaggtagaagagtgattgaggc
ttccaacatcaaccttcaaccgcttcgtgcacttgtatatgcatttataa
acaatgtgtccacacacagtcaaaacatgcaacagacagacacagagaga
gagagggggggggggag
gaattcccatctctgagtttgccccaaccctagtatctctcttaaagaag
atttgccttatcttggttccgggactcagcagaacttaggaaattagtct
gaacaggttagagggtgcgccagagaaccgaacagcttctggaacgggca
gaagcacagagccgctgaggcagcacccttggcgggccgcagacagccgg
ccaccgtccggaccagaggacaggtgtccgcctggcttgggaggcggcct
cagcctcagcagcagcggtcgccatctgggttctgggactccacgggacc
taggaaattagtctgaacaggttagagggtgcgccagaaaaccggacagc
ttctgggacgggcggaagcacagagccgctgaggcagtaccctttgcagg
ctgcagatagccggccaccgtccggaccagaggacaggtgtccccctggc
tcgggaggcggcctcagcctcaggagcagcggtcgccatcttggttccag
gactccctggaacttaggaatttagtctacacaggtgagagtctgcacca
cagaagctgacagcttctgggaactgccaaagcaacacagcttctgagag
aggccctgttttgggccttcttcttcgaccaggaggaggtccaaaaacaa
gatatctgcgcaccttccctgtaagagagcttgccagcagagagtgctct
gagcactgaaactcagaggagagaatctgtctcccaggtctgctgagaga
cggtaacagaatcaccagaagaacaatctctaaacagagtcaactataac
tactaactccagagactaccagatggcaaaaggtaaacataggaatccta
ctaacaggaaccaagaccactcaccatcatcagaacccagcactcccact
tcgcccagtccagggcaccccaacacacccgaaaactagactagatttaa
aagcatatctcatgatgatggtagaggacatcagaggactttataaatca
cttaaagaaatacagagaacactgctaagagttacagtcttaagaaaaac
agcaaaacacatcaacaggtagagtcctacggaaaagagaaaaaacaatc
aactggtatggaatgaataaccatacctgaacttagagggaagtccgaaa
tacccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4784111_4784727
seq2: B6Ng01-190M21.b_47_663

seq1  GAATTCTTTAGTGACGTGACTGGATTACATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTGACGTGACTGGATTACATATATATATATATATATATAT  50

seq1  ATATATATATATAAAACAAAGAATGGACTATGGAATGAATTGCTGTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATAAAACAAAGAATGGACTATGGAATGAATTGCTGTTAAA  100

seq1  CCATCTCTCATGGACGTTTTATATATAAATCTACTTTACATCAATAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCATGGACGTTTTATATATAAATCTACTTTACATCAATAGGAA  150

seq1  TGTTTACATTTGTTTGTGTTTCACAGCTTGTAAAAGGTGGGTTAAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATTTGTTTGTGTTTCACAGCTTGTAAAAGGTGGGTTAAAACAC  200

seq1  ACACACACAAACACACACACAGAGAGAGAGAGGCATTAAAAACATTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAAACACACACACAGAGAGAGAGAGGCATTAAAAACATTCAAA  250

seq1  ACTAAAAATACAGGAGCTGGGTAGATGACTTGGTGGTTCAGGTACTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATACAGGAGCTGGGTAGATGACTTGGTGGTTCAGGTACTTGCT  300

seq1  ATACAAGTGTGAGGATTAGAATTTAGTTCCTCCAAAACCCATATTGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTGTGAGGATTAGAATTTAGTTCCTCCAAAACCCATATTGGGTG  350

seq1  GGCAGGATGAGAGATCTGTAATTCCAGTCTTAGAATTTGGAGATGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATGAGAGATCTGTAATTCCAGTCTTAGAATTTGGAGATGAGTGA  400

seq1  TCACTAGGGCAATCTGGCAAGCTAGACTAGTCATATAGGCAAGCTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGGGCAATCTGGCAAGCTAGACTAGTCATATAGGCAAGCTCTACA  450

seq1  TTTGGTTGAGAAACCCTGCATCAATCAAAAGGTAGAAGAGTGATTGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGAGAAACCCTGCATCAATCAAAAGGTAGAAGAGTGATTGAGGC  500

seq1  TTCCAACATCAACCTTCAACCGCTTCGTGCACTTGTATATGCATTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACATCAACCTTCAACCGCTTCGTGCACTTGTATATGCATTTATAA  550

seq1  ACAATGTGTCCACACACAGTCAAAACATGCAACAGACAGACACAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGTCCACACACAGTCAAAACATGCAACAGACAGACACAGAGAGA  600

seq1  GAGAGGGGGGGGGGGAG  617
      |||||||||||||||||
seq2  GAGAGGGGGGGGGGGAG  617