BAC Information

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BAC

Clone NameB6Ng01-195N08
Chromosome5 (Build37)
Map Location 57,125,906 - 57,127,078
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100041335, LOC100041349, LOC666455, LOC625721, EG666465, Pcdh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N08.bB6Ng01-195N08.g
ACCGA018141GA018142
length1,0261,170
definitionB6Ng01-195N08.b B6Ng01-195N08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggtcaaaatctttaaggtaggttgttgaccacatccctccag
agagggtcctgtctatctattagaagtaatctactagaagattataccag
aagtatctactagaaggttccttctctccattgttgggactcttggctaa
ggtaattccctattgagtgctgggaacatctcacatcccacatcttttgg
acatttgtgaggttccctctgactctccatgccctggaaatgcattttcc
catccattcccctggccttctgggtttctctcctgtctttccccataccc
actcctgctatccttttcccctccctcatctcctacccaagttcttctct
ccctctgcctccaattattttgttttctcttctcaatagtattgcagcat
tctctcttgggtcttcttccttgttaaatttcttatgctttgtgggttgt
atcatgggtactctgtaattttggctaatatccactccgtgtacataaga
acttaagaagttggactcaagaaggacctaggggggaaagtggagggggc
aggagacggataggagaacctgatatagtattggaaagaaaggactgaag
ccttgagggcaagcagaaagagggaaacaggcaatttagaggaggttggg
ggtaccctgcagaatgcagcagagaagtaggaggtgagagacactcagga
ttcaaagggaggaaccctaaatgaaatacctgacaatagggagagagaac
ttatagagcccacctccagcagaagacagggcatcaaataaaggagaggg
ttctcatcgcacagtcaaaactctgacccaaagttattcctgtctgaaag
aactacagggatagaacggagaggagcctgaaaagaagtccagcaacagg
cccaaagtgggatccagctcaaggggaggtcccaaggcgtgactctatac
tgaggccatgggagtgctcacaaagtacctagcatgactgccctcatgaa
agacacaacaaacagcttagagagtc

gaattccataaaaaaatcaaattgcaatttttaaatagatggacaagaaa
aatgaaacaaagagctcagtggaaagcttataaaatggattagttcaact
aaaaggcagagtatgaggtcttaaagactagtgagcttaattagaatatt
cagagaacaaagaaaagaacagaacacctaaaacttttcacagaagcact
gaggcacataaaaagttaggcccatcagtataacagatttctcagtaaaa
actcatcaaagccaaagaggtcactgagtgaagtattttaagctcttaaa
ggtgagaactaacaccacagcttaataagatcactatatttctagatcat
caaggctatcactaataattgaaggaaaaaggaaaagcttttcaaatgaa
tataaactaaagactctgtgattaccaattgaaaattacaatacataatt
gaagggactctagtaacaaaataaaggtaaaaacaaccgatgttaagcta
aaaaaaaaaaaaaaaaacaaacaacaacaaaaaacgacgagacaaacttt
aattgtttgtttcatacagtgttttgaaaatctgtgcattatttctagac
tgtaaatgattcttgttaaagttttaacatctatatgaagctactagcaa
ttatttcttttctttttgggggatatagattttattgttttcagtattac
attttaactacattataggtttgttcactcacagtcattcatcaaatgag
gagggttataattcaaggcaagaagacttgttaggcacaagatataaatt
taattaaactcatataaaatactaagtttaggaacagaggttaacttaaa
atattctggcttatgcaaagatgaattattgaatcaaaactatgaattta
ccaaaatttagaagccaaacattcactaattcttgagatacaatagacaa
cagttataatacctgatttagattgtacatattgtcttactcaaatacag
aattaatagaagaacaagggtaaattcttatttacatggatatatatata
tattggaacatgggtagtatatcctatattttattaagaatatatgcaga
agaagaactttggcataaataattctgtggcacttcgacatttataataa
attttccctctcgtgaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_57125906_57127078
seq2: B6Ng01-195N08.g_64_1233 (reverse)

seq1  CTTTTC---AGA-GGAAATTTTATTATAAATGTCTGAAAATGCAAAAGAT  46
      ||||||   ||| ||||| |||||||||||||||   || ||| | ||| 
seq2  CTTTTCACGAGAGGGAAAATTTATTATAAATGTC--GAAGTGCCACAGA-  47

seq1  ATTATTTATACCAAAAT--CTCCTCTGCATATATTCCTAATTAAAATATA  94
      ||||||||| ||||| |   || ||||||||||||| ||| |||||||||
seq2  ATTATTTATGCCAAAGTTCTTCTTCTGCATATATTCTTAA-TAAAATATA  96

seq1  -GATATACTTACCAATG-TCAAATATTATTATATTATTATCCATTGTAAA  142
       ||||||| |||| ||| || ||||    |||||   |||||| ||||||
seq2  GGATATAC-TACCCATGTTCCAATA----TATATATATATCCA-TGTAAA  140

seq1  TAAGAATTACCCTTTGTTCTTCTATTAATTTCTGTATTTGAGTAAGACAA  192
      ||||||||  || ||||||||||||||| |||||||||||||||||||||
seq2  TAAGAATTTACCCTTGTTCTTCTATTAA-TTCTGTATTTGAGTAAGACAA  189

seq1  TATGTACAATCTAATTCAGGTATTATAACTGTTGTCTATTGTTATCTCAA  242
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TATGTACAATCTAAATCAGGTATTATAACTGTTGTCTATTG-TATCTCAA  238

seq1  GAATTAGTGAATGTTTGGCTTCTAAATTTT-GTAAATTCATAGTTTTGAT  291
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAATTAGTGAATGTTTGGCTTCTAAATTTTGGTAAATTCATAGTTTTGAT  288

seq1  TCAATAATTCATCTTTGCATAAGCCAGAATATTTTAAGTTAACCTCTGTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTCATCTTTGCATAAGCCAGAATATTTTAAGTTAACCTCTGTT  338

seq1  CCTAAACTTAGTATTTTATATGAGTTTAATTAAATTTATATCTTGTGCCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAACTTAGTATTTTATATGAGTTTAATTAAATTTATATCTTGTGCCT  388

seq1  AACAAGTCTTCTTGCCTTGAATTATAACCCTCCTCATTTGATGAATGACT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTCTTCTTGCCTTGAATTATAACCCTCCTCATTTGATGAATGACT  438

seq1  GTGAGTGAACAAACCTATAATGTAGTTAAAATGTAATACTGAAAACAATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGAACAAACCTATAATGTAGTTAAAATGTAATACTGAAAACAATA  488

seq1  AAATCTATATCCCCCAAAAAGAAAAGAAATAATTGCTAGTAGCTTCATAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATATCCCCCAAAAAGAAAAGAAATAATTGCTAGTAGCTTCATAT  538

seq1  AGATGTTAAAACTTTAACAAGAATCATTTACAGTCTAGAAATAATGCACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTAAAACTTTAACAAGAATCATTTACAGTCTAGAAATAATGCACA  588

seq1  GATTTTCAAAACACTGTATGAAACAAACAATTAAAGTTTGTCTCGTCGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAAAACACTGTATGAAACAAACAATTAAAGTTTGTCTCGTCGTT  638

seq1  TTTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTAGCTTAACATCGGTTGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTAGCTTAACATCGGTTGT  688

seq1  TTTTACCTTTATTTTGTTACTAGAGTCCCTTCAATTATGTATTGTAATTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTTTATTTTGTTACTAGAGTCCCTTCAATTATGTATTGTAATTT  738

seq1  TCAATTGGTAATCACAGAGTCTTTAGTTTATATTCATTTGAAAAGCTTTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGGTAATCACAGAGTCTTTAGTTTATATTCATTTGAAAAGCTTTT  788

seq1  CCTTTTTCCTTCAATTATTAGTGATAGCCTTGATGATCTAGAAATATAGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCCTTCAATTATTAGTGATAGCCTTGATGATCTAGAAATATAGT  838

seq1  GATCTTATTAAGCTGTGGTGTTAGTTCTCACCTTTAAGAGCTTAAAATAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTATTAAGCTGTGGTGTTAGTTCTCACCTTTAAGAGCTTAAAATAC  888

seq1  TTCACTCAGTGACCTCTTTGGCTTTGATGAGTTTTTACTGAGAAATCTGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAGTGACCTCTTTGGCTTTGATGAGTTTTTACTGAGAAATCTGT  938

seq1  TATACTGATGGGCCTAACTTTTTATGTGCCTCAGTGCTTCTGTGAAAAGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGATGGGCCTAACTTTTTATGTGCCTCAGTGCTTCTGTGAAAAGT  988

seq1  TTTAGGTGTTCTGTTCTTTTCTTTGTTCTCTGAATATTCTAATTAAGCTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGTTCTGTTCTTTTCTTTGTTCTCTGAATATTCTAATTAAGCTC  1038

seq1  ACTAGTCTTTAAGACCTCATACTCTGCCTTTTAGTTGAACTAATCCATTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTTTAAGACCTCATACTCTGCCTTTTAGTTGAACTAATCCATTT  1088

seq1  TATAAGCTTTCCACTGAGCTCTTTGTTTCATTTTTCTTGTCCATCTATTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTTTCCACTGAGCTCTTTGTTTCATTTTTCTTGTCCATCTATTT  1138

seq1  AAAAATTGCAATTTGATTTTTTTATGGAATTC  1173
      ||||||||||||||||||||||||||||||||
seq2  AAAAATTGCAATTTGATTTTTTTATGGAATTC  1170


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