BAC Information

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BAC

Clone NameB6Ng01-196B02
Chromosome5 (Build37)
Map Location 90,754,567 - 90,755,695
singlet/doubletsinglet
Overlap geneAnkrd17
Upstream geneGc, LOC622870, Npffr2, LOC631105, Adamts3, EG665733, Cox18
Downstream geneAlb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2, 1110019K23Rik, Epgn, Ereg, Areg
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196B02.bB6Ng01-196B02.g
ACCGA018312GA018313
length1,1231,178
definitionB6Ng01-196B02.b B6Ng01-196B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagataaaggaaactgtaagtataatgtttctgaggaaagcctc
catgattggtaatttgaaggggaagaaactgagagacagtagagaggatg
gtaatttctataaagaaataggtgagacttttttcccctcaattgcatag
aagattgctgtgaggtttgtgaagggaaatggagtgtgacttgttaacct
ttctggagttttctccccttcctccttcgtttgtgtacacgcagtgcact
tggcatgtgcacatatggaaccaagctagcctatgtcatttgggggaacc
tgtggagcctctgaccaataatgtgtagttatctcatgcctgacactaag
attgtcatttaataacacctgtcttctgggaatagcattgtttgttcact
tatgcaggatagttccattcaaacattttgttgttttaaattacattttt
taattaacttacaaacaagagtgtttccataagactttttcaaacatctt
tgttttagtcagcttacttcttttcctgtctccacatccagatcccagtg
ccttaatttctataatgtaaacactactcaaccatatcagtaggaatata
aactgtgatgtggtaacattataacttgatttcctattttctatcacagg
acctctccttttagaagctgagaactatgcccacccaagatacctaatta
atttgtagtttagttggtaggaaattagcttgactacttaatacatagcc
acagacaaatagaacattggtcaaatgggaaatggtatagatctcttaaa
attgaatgtattgattttttttcatatattttagatgtaaaaaataaatt
ctagtactttaagttgagttttacatataatactgtgaaactttgatgta
gacattcagtggctccaacctagtttgcctgctaatacttgtctgtcaag
ataccataataatgtcactgaaaattatgcagcacctcttggattgatgg
attttttttttagtttaattttatctttctagaaaaaaatattataagaa
ttactgtgctggcaagatgcttatcagtaagctgtagatatacgtttgaa
tagctgtactgaacataaatgtg
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtccaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacccgaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctatgaaaaataatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacataatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttccaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagcccaagagctaaaggatctgcaaccctat
agtgacacattatgaactaccagtaccccggagctctgactctagctgcc
ataatatatcaaagatgcctagtcgccatcactggtaaagaagaagccca
tgactggcaacttttattgccagtacaggaacccaagtctaaaatgggta
gtgcgtggtgtagacaagcgtgactctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90754567_90755695
seq2: B6Ng01-196B02.b_47_1169 (reverse)

seq1  CACATTTATG-TCAGTTCCAGCTA-TCAAACGTATATCTACAGGCTTTAC  48
      |||||||||| |||| | |||||| ||||||||||||||||||   ||||
seq2  CACATTTATGTTCAG-TACAGCTATTCAAACGTATATCTACAG--CTTAC  47

seq1  TTGATAAGCCATCTTGCCAGCACAGTAATTCTTTATAATATTTTTTTTTC  98
       ||||||| |||||||||||||||||||||| ||||||||  ||||||||
seq2  -TGATAAG-CATCTTGCCAGCACAGTAATTC-TTATAATA--TTTTTTTC  92

seq1  TAGAAAGATAAAATTAAACTAAAAAAAAAATCCATCAATCCAAGAGGTGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGATAAAATTAAACTAAAAAAAAAATCCATCAATCCAAGAGGTGC  142

seq1  TGCATAATTTTTCAGTGACATTATTATGGTATCTTGACAGACAAGTATTA  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAA-TTTTCAGTGACATTATTATGGTATCTTGACAGACAAGTATTA  191

seq1  GCAGGCAAACTAGGTTGGAGCCACTGAATGTCTACATCAAAGTTTCACAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAAACTAGGTTGGAGCCACTGAATGTCTACATCAAAGTTTCACAG  241

seq1  TATTATATGTAAAACTCAACTTAAAGTACTAGAATTTATTTTTTACATCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATGTAAAACTCAACTTAAAGTACTAGAATTTATTTTTTACATCT  291

seq1  AAAATATATG-AAAAAAATCAATACATTCAATTTTAAGAGATCTATACCA  347
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATGAAAAAAAATCAATACATTCAATTTTAAGAGATCTATACCA  341

seq1  TTTCCCATTTGACCAATGTTCTATTTGTCTGTGGCTATGTATTAAGTAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATTTGACCAATGTTCTATTTGTCTGTGGCTATGTATTAAGTAGT  391

seq1  CAAGCTAATTTCCTACCAACTAAACTACAAATTAATTAGGTATCTTGGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAATTTCCTACCAACTAAACTACAAATTAATTAGGTATCTTGGGT  441

seq1  GGGCATAGTTCTCAGCTTCTAAAAGGAGAGGTCCTGTGATAGAAAATAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAGTTCTCAGCTTCTAAAAGGAGAGGTCCTGTGATAGAAAATAGG  491

seq1  AAATCAAGTTATAATGTTACCACATCACAGTTTATATTCCTACTGATATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGTTATAATGTTACCACATCACAGTTTATATTCCTACTGATATG  541

seq1  GTTGAGTAGTGTTTACATTATAGAAATTAAGGCACTGGGATCTGGATGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTAGTGTTTACATTATAGAAATTAAGGCACTGGGATCTGGATGTG  591

seq1  GAGACAGGAAAAGAAGTAAGCTGACTAAAACAAAGATGTTTGAAAAAGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGAAAAGAAGTAAGCTGACTAAAACAAAGATGTTTGAAAAAGTC  641

seq1  TTATGGAAACACTCTTGTTTGTAAGTTAATTAAAAAATGTAATTTAAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAAACACTCTTGTTTGTAAGTTAATTAAAAAATGTAATTTAAAAC  691

seq1  AACAAAATGTTTGAATGGAACTATCCTGCATAAGTGAACAAACAATGCTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGTTTGAATGGAACTATCCTGCATAAGTGAACAAACAATGCTA  741

seq1  TTCCCAGAAGACAGGTGTTATTAAATGACAATCTTAGTGTCAGGCATGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAAGACAGGTGTTATTAAATGACAATCTTAGTGTCAGGCATGAG  791

seq1  ATAACTACACATTATTGGTCAGAGGCTCCACAGGTTCCCCCAAATGACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTACACATTATTGGTCAGAGGCTCCACAGGTTCCCCCAAATGACAT  841

seq1  AGGCTAGCTTGGTTCCATATGTGCACATGCCAAGTGCACTGCGTGTACAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCTTGGTTCCATATGTGCACATGCCAAGTGCACTGCGTGTACAC  891

seq1  AAACGAAGGAGGAAGGGGAGAAAACTCCAGAAAGGTTAACAAGTCACACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAGGAGGAAGGGGAGAAAACTCCAGAAAGGTTAACAAGTCACACT  941

seq1  CCATTTCCCTTCACAAACCTCACAGCAATCTTCTATGCAATTGAGGGGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCCTTCACAAACCTCACAGCAATCTTCTATGCAATTGAGGGGAA  991

seq1  AAAAGTCTCACCTATTTCTTTATAGAAATTACCATCCTCTCTACTGTCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTCACCTATTTCTTTATAGAAATTACCATCCTCTCTACTGTCTC  1041

seq1  TCAGTTTCTTCCCCTTCAAATTACCAATCATGGAGGCTTTCCTCAGAAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCTTCCCCTTCAAATTACCAATCATGGAGGCTTTCCTCAGAAAC  1091

seq1  ATTATACTTACAGTTTCCTTTATCTGGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  ATTATACTTACAGTTTCCTTTATCTGGAATTC  1123