BAC Information

Click to search

BAC

Clone NameB6Ng01-196O06
Chromosome5 (Build37)
Map Location 74,505,886 - 74,506,741
singlet/doubletsinglet
Overlap genenone
Upstream geneFryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik
Downstream geneRasl11b, Scfd2, Fip1l1, Lnx1, EG619945, Chic2, Gsh2, LOC100039083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196O06.bB6Ng01-196O06.g
ACCGA018906GA018907
length864965
definitionB6Ng01-196O06.b B6Ng01-196O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttccttgttaaggctagacactgtcctactgtatttcacaca
ccgcattttgtctacccatttgtttactgatgaggactagggttcctcct
ctgggctagtgaacgctgctgtgatggatgttgtttacatgctcttgcat
aacacatacttgtttattgtattatgtgtatttattgtttatgtaggtta
cacaaacctctaacctggaatttgtataatataggtaataggttggcttt
gtgtttctctttgtgtccttgtttctcattgagacatggtcttacaaagt
tactctggctgtcctagaactcattctgtagactaggctggccttgaatt
tacagagatctgcttgcttctgcctctcaagtgctgagattaaaaaggca
tgcaccatcatacacagaaggaattagctttaaggttcctttgagatact
ggctataaagcctggacatacttttgaattccctgggtcttgaaattctc
cccctctataccacactccaaatcaactgtgtccttggaagtgggactca
ggctttagtgtcagttgtaaatcttaccaagtgattcaaatgtgcagcca
agtttgagaattggcttgccttaaaaaattattagtgagcacttggttat
ggttgggaaaataaaatgttcccccatgggctcatttgctgagtgcttgg
gtccccggctgttggcaatatttctaagagagttagctcctgaatctggt
taggtggtggggggcctgggtgaagcagggtcattggggtgagcctctgg
ggggaacgtgtccctgtctctcctcatccctcacttctttctctccctcc
ttcttccttccttc
gaattccgccttccaactgttctatgggtttctttagcttatggcccact
ttaagtgggctacatggtagttggacataatggtttgtgaggaaagacct
ctgtgcctcagacaatatgtaaagcaaggacattgaaagattagtgaatg
tgccagctggatatcaatttaaaacaaaattataattgtatatatgtggg
caggcagacatatggatataaatatctgagtatctgtatttgggtgcatg
gatgtggatatgtgtgtggctactgatatgtgtgtgagagagaaattggt
cctcatgattcccattttgagcatctccattctctggcgttctaagcatg
ctcagatggggtcatgctgtctttgctcgctgtccagatctcctcagggg
gttctcagtcaactttagaattaaatgcctccttcacttttggttctttt
gcactgttttatttccagaatatgtgaaaaccccagaaaaaggactttaa
aacatcgttcaaggaaaaaaaggatgcacctgcggatgatgagggctata
acccccctgtctaccttttgcctgccaactaaagactttctcgacgcccc
aaagacccctgtgttaagccctatgcatggcgaaagaaaaaaatgggtgg
ggtaaactcagggaaaaaaaaagaaatgtaacctaaaccttggcggaaag
gcactttccccatttccaaaaattcaggttacaattttaatctggaataa
agactggaaaatgatttttacctgccttcccacaagctttttcctccagg
gggccggggagggtttaactcaaacacttccccatgcctccttgggttct
ttgctaataggactaaccttggaggtaaaagccacccccgaaaaaaatcc
caagggggtcccctaaccctccctctgtttgttaactatgtgttacttct
cgtgagtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_74505886_74506741
seq2: B6Ng01-196O06.b_44_907

seq1  GAATTCTCTTCCTTGTTAAGGCTAGACACTGTCCTACTGTATTTCACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCCTTGTTAAGGCTAGACACTGTCCTACTGTATTTCACACA  50

seq1  CCGCATTTTGTCTACCCATTTGTTTACTGATGAGGACTAGGGTTCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATTTTGTCTACCCATTTGTTTACTGATGAGGACTAGGGTTCCTCCT  100

seq1  CTGGGCTAGTGAACGCTGCTGTGATGGATGTTGTTTACATGCTCTTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAGTGAACGCTGCTGTGATGGATGTTGTTTACATGCTCTTGCAT  150

seq1  AACACATACTTGTTTATTGTATTATGTGTATTTATTGTTTATGTAGGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATACTTGTTTATTGTATTATGTGTATTTATTGTTTATGTAGGTTA  200

seq1  CACAAACCTCTAACCTGGAATTTGTATAATATAGGTAATAGGTTGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACCTCTAACCTGGAATTTGTATAATATAGGTAATAGGTTGGCTTT  250

seq1  GTGTTTCTCTTTGTGTCCTTGTTTCTCATTGAGACATGGTCTTACAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTCTTTGTGTCCTTGTTTCTCATTGAGACATGGTCTTACAAAGT  300

seq1  TACTCTGGCTGTCCTAGAACTCATTCTGTAGACTAGGCTGGCCTTGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGGCTGTCCTAGAACTCATTCTGTAGACTAGGCTGGCCTTGAATT  350

seq1  TACAGAGATCTGCTTGCTTCTGCCTCTCAAGTGCTGAGATTAAAAAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGATCTGCTTGCTTCTGCCTCTCAAGTGCTGAGATTAAAAAGGCA  400

seq1  TGCACCATCATACACAGAAGGAATTAGCTTTAAGGTTCCTTTGAGATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATCATACACAGAAGGAATTAGCTTTAAGGTTCCTTTGAGATACT  450

seq1  GGCTATAAAGCCTGGACATACTTTTGAATTCCCTGGGTCTTGAAATTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATAAAGCCTGGACATACTTTTGAATTCCCTGGGTCTTGAAATTCTC  500

seq1  CCCCTCTATACCACACTCCAAATCAACTGTGTCCTTGGAAGTGGGACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTATACCACACTCCAAATCAACTGTGTCCTTGGAAGTGGGACTCA  550

seq1  GGCTTTAGTGTCAGTTGTAAATCTTACCAAGTGATTCAAATGTGCAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAGTGTCAGTTGTAAATCTTACCAAGTGATTCAAATGTGCAGCCA  600

seq1  AGTTTGAGAA-TGGC-TGCCCTAAAAAATTAATTAGTGAGCACTT-GTTA  647
      |||||||||| |||| |||| ||||||||| |||||||||||||| ||||
seq2  AGTTTGAGAATTGGCTTGCCTTAAAAAATT-ATTAGTGAGCACTTGGTTA  649

seq1  TGGTTGGG-ATATAAAATGTTCCCCCATGGGCTCATTTGCTGAGTGCTT-  695
      |||||||| | |||||||||||||||||||||||||||||||||||||| 
seq2  TGGTTGGGAAAATAAAATGTTCCCCCATGGGCTCATTTGCTGAGTGCTTG  699

seq1  GGTCCCCGGCTGTTGGCAATA-TTCT-AGAGAGTTAGCT-CTGAATCT-G  741
      ||||||||||||||||||||| |||| |||||||||||| |||||||| |
seq2  GGTCCCCGGCTGTTGGCAATATTTCTAAGAGAGTTAGCTCCTGAATCTGG  749

seq1  TTAGGTGGTGGGGG--CTGGGTGAAGCA-GGTCATTGGGGTGAGCCTCTG  788
      ||||||||||||||  |||||||||||| |||||||||||||||||||||
seq2  TTAGGTGGTGGGGGGCCTGGGTGAAGCAGGGTCATTGGGGTGAGCCTCTG  799

seq1  GGGGAAACGTGTCCCTGTCTCTCCTCTATCCCTCACTCCTTTCTCTCCCT  838
      |||| ||||||||||||||||||||| |||||||||| ||||||||||| 
seq2  GGGGGAACGTGTCCCTGTCTCTCCTC-ATCCCTCACTTCTTTCTCTCCC-  847

seq1  TCCTTCCTTCCTTCCTTC  856
      ||||| ||||||||||||
seq2  TCCTT-CTTCCTTCCTTC  864