BAC Information

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BAC

Clone NameB6Ng01-197E24
Chromosome5 (Build37)
Map Location 82,485,390 - 82,486,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn3
Downstream geneEG433912, LOC100039434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197E24.bB6Ng01-197E24.g
ACCGA019211GA019212
length9681,175
definitionB6Ng01-197E24.b B6Ng01-197E24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcttctgtaacttcacagagttgaaaatacatctgtggcactctt
ctcggtttcccttgcttggttcttatttgtaatatcaaagttattaataa
aactatgtcactggaaaaaaccttgctcttctgacatttcataatctgag
ctggtaacttaggtcaaccaaaaagcccagtgttttcatcactcttacat
cacttgtgctagcttttcccaccttcttttctcatcgatagtcagatgac
agcttccttaagacgtgttcatcaactgtgttttcttttcaataggtaat
ttctattacagcctttgcatgtatgcttagaaaattcttattatacaccc
tgagcaaaattaaccctccctctactcctaccattccctctccatctgaa
ctcctcatcctctgcttctcttaaaaaagaaatgaaagaaagaaaagaac
agaaacatgaaaaggcatgcctcccagtaatatgcaacatgcagagatta
gcaggatacaataagactgagtgcatcccctcatatcatagctggacaaa
ccaagcaagtaggaggaaaggagtcctaagtgaaagcaaaagagtcagat
acatcccctactccaattactgagagtcccaaaagaacatcaagctacac
aactgtaaggtgtatgcagaggacatagcctagactcacataagatatgt
gtttgtcacttcaggttttctgcaagccacttcaagccctatttaattga
ttctgtgggccatgttctcctcatgtcctctgcccctttggctcctacaa
ccttcctcttccttttctgtgagattcctctatccctgcttggtgttggg
ctatgcatctatgcatctgttcctataaattgctggcgacaactgggcta
ggcaccaatctgggagtatagcagaatatcgttaggaatcgttttgttga
cttttttttttttttttt

gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
acaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatgattttcatatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtgttcttggattcggttagcgagaatttaattgaggaatttgcat
cgatattcataagagaaattggtctgaagttctctatctttgttgggtct
ttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttggg
tagagtaccttctacttctattttgtgaaatagtttgtgcagaactggaa
ttagatcttctttgaaggtctgatagaactctgcactaaacccatctggt
cctgggctttttttgactgggagactattgataactgcttctatttcttt
aggtgatatgggactgtttagatggtcaacttgatcctgattcaactttg
gtactgggtatctgtccagaaatttgtccatttcgtccaggttttccagt
tttgttgagtatagccttttgtagaaggatctgatggtgttttggatttc
ttcaggatctgttgttatgtctcccttttcatttctgattttgttaatta
ggattttgtccctgtgccctttagtgagtctagctaacggtttatctatc
ttgttgattttttcaaagaaccaactcctcgtttggttaattctttgaat
agttcttcttgtttccacttggttgatttcacccctgagtttgattattt
cctgccgtctactcctcttgggtgaatttgcttccttttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccggtttctct
gggagcactcagagctatgaaatttctcttctagaaatgctttcattgtg
tccataggttgggtactttgtggccttcatttcattaaactcttaaaaag
tctttaattcctctttatttcttccttgaacgagtattcattagaagagt
ctgttcaggttccaggtgagttggcctttacatactagcttgttatggag
gatttcagtctatccacatgtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_82485390_82486226
seq2: B6Ng01-197E24.b_49_885

seq1  GAATTCTTCTGTAACTTCACAGAGTTGAAAATACATCTGTGGCACTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTAACTTCACAGAGTTGAAAATACATCTGTGGCACTCTTC  50

seq1  TCGGTTTCCCTTGCTTGGTTCTTATTTGTAATATCAAAGTTATTAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTTCCCTTGCTTGGTTCTTATTTGTAATATCAAAGTTATTAATAAA  100

seq1  ACTATGTCACTGGAAAAAACCTTGCTCTTCTGACATTTCATAATCTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTCACTGGAAAAAACCTTGCTCTTCTGACATTTCATAATCTGAGC  150

seq1  TGGTAACTTAGGTCAACCAAAAAGCCCAGTGTTTTCATCACTCTTACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTTAGGTCAACCAAAAAGCCCAGTGTTTTCATCACTCTTACATC  200

seq1  ACTTGTGCTAGCTTTTCCCACCTTCTTTTCTCATCGATAGTCAGATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGCTAGCTTTTCCCACCTTCTTTTCTCATCGATAGTCAGATGACA  250

seq1  GCTTCCTTAAGACGTGTTCATCAACTGTGTTTTCTTTTCAATAGGTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTAAGACGTGTTCATCAACTGTGTTTTCTTTTCAATAGGTAATT  300

seq1  TCTATTACAGCCTTTGCATGTATGCTTAGAAAATTCTTATTATACACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTACAGCCTTTGCATGTATGCTTAGAAAATTCTTATTATACACCCT  350

seq1  GAGCAAAATTAACCCTCCCTCTACTCCTACCATTCCCTCTCCATCTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAATTAACCCTCCCTCTACTCCTACCATTCCCTCTCCATCTGAAC  400

seq1  TCCTCATCCTCTGCTTCTCTTAAAAAAGAAATGAAAGAAAGAAAAGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCCTCTGCTTCTCTTAAAAAAGAAATGAAAGAAAGAAAAGAACA  450

seq1  GAAACATGAAAAGGCATGCCTCCCAGTAATATGCAACATGCAGAGATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGAAAAGGCATGCCTCCCAGTAATATGCAACATGCAGAGATTAG  500

seq1  CAGGATACAATAAGACTGAGTGCATCCCCTCATATCATAGCTGGACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATACAATAAGACTGAGTGCATCCCCTCATATCATAGCTGGACAAAC  550

seq1  CAAGCAAGTAGGAGGAAAGGAGTCCTAAGTGAAAGCAAAAGAGTCAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGTAGGAGGAAAGGAGTCCTAAGTGAAAGCAAAAGAGTCAGATA  600

seq1  CATCCCCTACTCCAATTACTGAGAGTCCCAAAAGAACATCAAGCTACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTACTCCAATTACTGAGAGTCCCAAAAGAACATCAAGCTACACA  650

seq1  ACTGTAAGGTGTATGCAGAGGACATAGCCTAGACTCACATAAGATATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAGGTGTATGCAGAGGACATAGCCTAGACTCACATAAGATATGTG  700

seq1  TTTGTCACTTCAGGTTTTCTGCAAGCCACTTCAAGCCCTATTTAATTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTTCAGGTTTTCTGCAAGCCACTTCAAGCCCTATTTAATTGAT  750

seq1  TCTGTGGGCCATGTTCTCCTCATGTCCTCTGCCCCTTTGGCTCCTACAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGCCATGTTCTCCTCATGTCCTCTGCCCCTTTGGCTCCTACAAC  800

seq1  CTTCCTCTTCCTTTTCTGTGAGATTCCTCTATCCCTG  837
      |||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTCCTTTTCTGTGAGATTCCTCTATCCCTG  837


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