BAC Information

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BAC

Clone NameB6Ng01-198O05
Chromosome5 (Build37)
Map Location 131,895,488 - 132,000,466
singlet/doubletdoublet
Overlap geneAuts2
Upstream geneCaln1, Wbscr17
Downstream gene4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O05.bB6Ng01-198O05.g
ACCGA020367GA020368
length238330
definitionB6Ng01-198O05.b B6Ng01-198O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,895,488 - 131,895,728)(132,000,137 - 132,000,466)
sequence
ttttgtgtgtgccttttataacgggacaaaatcgcctccaaattatgatg
gctgtcgggagctggagggaaaaggaaattgaatatgtgctttttctgag
ttctgaggaattgattagggattaatggaggggggatggataaataggct
aattgatcaggtatttatattcccaaaccaaacatggggtgggaaagccc
ccctttctggatgctattcatttcttgttccctcagat
aattcttgaattcaccagggagaacctgggcctgaatttgtactttttcg
atgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgggaatg
gaacatgaatagcatatctttgatgtatctgatgtatgtttagagattgt
cacatatgtggcagtaacagggtctctcatttgtcacctccggtgtcagg
ctagctgcccaggagctttcatgggttctgtctctgcctctcttctcacc
acaggagccctgggattatggacacgctgctccatatatctctgtatgac
ttctgggggtcgcaaatcagatcctcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_131895488_131895728
seq2: B6Ng01-198O05.b_49_286

seq1  TTTTGTGTGTGCCTTTTATAACGGGACAAAATCGCCTCCAAATTATGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTGTGCCTTTTATAACGGGACAAAATCGCCTCCAAATTATGATG  50

seq1  GCTGTCGGGAGCTGGAGGGAAAAGGAAATTGAATATGTGCTTTTTCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCGGGAGCTGGAGGGAAAAGGAAATTGAATATGTGCTTTTTCTGAG  100

seq1  TTCTGAGGAATTGATTAGGGATTAATGGAGGGGGGATGGATAAATAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGAATTGATTAGGGATTAATGGAGGGGGGATGGATAAATAGGCT  150

seq1  AATTGATCAGGTAATTTATATTCCCAAACAAAACATGGGGTGGGAAAGCC  200
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  AATTGATCAGGT-ATTTATATTCCCAAACCAAACATGGGGTGGGAAAGCC  199

seq1  CCCCACAGCTGGATGCAATTCATTTCCCTGTTCCCTCAGAT  241
      ||||    |||||||| |||||||| | |||||||||||||
seq2  CCCC-TTTCTGGATGCTATTCATTT-CTTGTTCCCTCAGAT  238

seq1: chr5_132000137_132000466
seq2: B6Ng01-198O05.g_70_399 (reverse)

seq1  CTCTGAGGATCTGATTTGCGACCCCCAGAAGTCATACAGAGATATATGGA  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGATCTGATTTGCGACCCCCAGAAGTCATACAGAGATATATGGA  50

seq1  GCAGCGTGTCCATAATCCCAGGGCTCCTGTGGTGAGAAGAGAGGCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGTGTCCATAATCCCAGGGCTCCTGTGGTGAGAAGAGAGGCAGAGA  100

seq1  CAGAACCCTTGAAAGCTCCTGGGCAGCTAGCCTGACACCTGAGGTGACAA  150
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  CAGAACCCATGAAAGCTCCTGGGCAGCTAGCCTGACACCGGAGGTGACAA  150

seq1  ATGAGAGACCCTGTTACTGCCACATATGTGACAATCTCTAAACATACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGACCCTGTTACTGCCACATATGTGACAATCTCTAAACATACATC  200

seq1  AGATACATCAAAGATATGCTATTCATGTTCCATTCCCACCACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACATCAAAGATATGCTATTCATGTTCCATTCCCACCACACACACAC  250

seq1  ACACACACACACACACACACACACACACATCGAAAAAGTACAAATTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATCGAAAAAGTACAAATTCAGG  300

seq1  CCCAGGTTCTCCCTGGTGAATTCAAGAATT  330
      ||||||||||||||||||||||||||||||
seq2  CCCAGGTTCTCCCTGGTGAATTCAAGAATT  330