BAC Information

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BAC

Clone NameB6Ng01-214L04
Chromosome5 (Build37)
Map Location 69,855,779 - 69,982,101
singlet/doubletdoublet
Overlap geneYipf7, Guf1, Gnpda2
Upstream geneLOC666996, Kctd8, LOC545756
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214L04.bB6Ng01-214L04.g
ACCGA031881GA031882
length1,1501,123
definitionB6Ng01-214L04.b B6Ng01-214L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,855,779 - 69,856,942)(69,980,978 - 69,982,101)
sequence
gaattctttctattttagaagccaatgtttcttgcctcgtgaagagtgga
aagtttctgaaagccagtgcaacatctaaaaggagaataatgaaccagtg
actaagctttgtgccttatttgaactctagggggcagtgttttttattct
gagtgactacgctttgaacaatacattgctcagacatttaaatgtctctt
ctggtttgttctccaaatttgatacctctggaaatggaaacttaaattag
gatcattacctttcctaaaattggtcatggtcttctggtaaaatatactt
atttgtatattaaagcaaagaagatctagtaattgaggtgatcaattgaa
atatatgaataaaagcaacaaggaaatgaatcagaggggccagtatagta
gttaaatgtgttgagcatgtgtaagaccttaggtccagactcagtgctga
agaaagacaaagagaaagatgatagagagagcaaaaacaggaaagagaga
atggaagaaaggagatggattggaaggagaaaaggagaagaaagatcata
atattaataggaaaatttatgccctttaatctcagatgaaataactgagc
aaaagtaatttaaaaataataatagaaggtaagaaagactgaatagctca
taggtaggaaagcttatacagagcaaagaatttcctttcatatcttgttt
ataaaacttttcaaacagtaccttgaattcagccacaaagaatatcaact
atttctctaagatggaatgaaaacctgcattctctcatgacagtgcaatt
aatctataaatgaataaatgtgttaaatatgaaatagaccactttgaaat
gctatcaaacgttaaaggaaaaatgtctttcaaattataacatttccaca
actcctcattggtctacttgtccaagatattggtaactaatactccctct
aaacttctgaagattaactataaactctatatgtagaagtgagaatgata
ttttcctttctgactcacttcataacacacatgtatcttatattatcata
aaacgattattctttatgtcagatatcttccatatacaccagctcaatgt
gaagaatactaacaaagccaccacactacttctgacaatgtcctaaaaga


gaattctagattatagtgatcatactttttttgttgttttagaattctaa
gtcctgttcttaagaatatcatttagtttccatgtattggttattagacg
ttctgttcctgttggcttacacagtttgatttagtattctgtgtaaagtg
cctttactgaacaggaatgctgaagccaccatgtcattgaatggtcagtg
ttggtgagtgacatatttaaacgtgaaaatagaaatttaaaactgagact
tgtgcttcttgcatataggatatataagtttcttagtaatatttttttaa
gtaaaagagtaagcacttcggtcctaaatttgcatttttgtgaagaattt
ctcttccaagagaccagcactttcagtcaagtatgatcttataaaatcct
ttccctgcattttgtgtgtgtgtgtttgcttgtgcgtgcttatgagcatg
cacattcgatatctcaatggtatataaagaatgatgctgaaaattatttc
tggtgggatttaaacatgtttcacagaacagaaatttgatcattatggta
ttcttagcagaaattctggattttggtaagtaatttaaaggcactaaagc
tttctagtactgaacttgtagttaagaaatgataggtttttgttgttgtt
ttggttttgttcagggatggctgctttgataagagaatataatatacttg
tatatagtgtagtgtgatggcttcatttggatttgaattctgttgtgtca
ctgatgtgaccacagacaagtcatgtgagtccatgttctcttcacaagat
ttgttatggattatatatacatctaaatgacctaactcaaatgccagaag
ctcagtgcgtttttgacaaaaaaagagtgctattcctactgtttccgggt
agtaattgtattgtactgtttcaagtatgcattgtatttttatgtgtgta
tgccctccttaagtattgctcttttttaatcaacatatcataatactgtg
tgtctggaacatgtctaagtactctatgaattccaacagtttcaactctt
ggaaccgaaagcttgtgcatcaaccataattgagcctggatatcttgata
acatagtactggcagcgaatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_69855779_69856942
seq2: B6Ng01-214L04.b_43_1192

seq1  GAATTCTTTCTATTTTAGAAGCCAATGTTTCTTGCCTCGTGAAGAGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATTTTAGAAGCCAATGTTTCTTGCCTCGTGAAGAGTGGA  50

seq1  AAGTTTCTGAAAGCCAGTGCAACATCTAAAAGGAGAATAATGAACCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTGAAAGCCAGTGCAACATCTAAAAGGAGAATAATGAACCAGTG  100

seq1  ACTAAGCTTTGTGCCTTATTTGAACTCTAGGGGGCAGTGTTTTTTATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCTTTGTGCCTTATTTGAACTCTAGGGGGCAGTGTTTTTTATTCT  150

seq1  GAGTGACTACGCTTTGAACAATACATTGCTCAGACATTTAAATGTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACTACGCTTTGAACAATACATTGCTCAGACATTTAAATGTCTCTT  200

seq1  CTGGTTTGTTCTCCAAATTTGATACCTCTGGAAATGGAAACTTAAATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTTCTCCAAATTTGATACCTCTGGAAATGGAAACTTAAATTAG  250

seq1  GATCATTACCTTTCCTAAAATTGGTCATGGTCTTCTGGTAAAATATACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTACCTTTCCTAAAATTGGTCATGGTCTTCTGGTAAAATATACTT  300

seq1  ATTTGTATATTAAAGCAAAGAAGATCTAGTAATTGAGGTGATCAATTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATATTAAAGCAAAGAAGATCTAGTAATTGAGGTGATCAATTGAA  350

seq1  ATATATGAATAAAAGCAACAAGGAAATGAATCAGAGGGGCCAGTATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAATAAAAGCAACAAGGAAATGAATCAGAGGGGCCAGTATAGTA  400

seq1  GTTAAATGTGTTGAGCATGTGTAAGACCTTAGGTCCAGACTCAGTGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGTGTTGAGCATGTGTAAGACCTTAGGTCCAGACTCAGTGCTGA  450

seq1  AGAAAGACAAAGAGAAAGATGATAGAGAGAGCAAAAACAGGAAAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAAAGAGAAAGATGATAGAGAGAGCAAAAACAGGAAAGAGAGA  500

seq1  ATGGAAGAAAGGAGATGGATTGGAAGGAGAAAAGGAGAAGAAAGATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAAAGGAGATGGATTGGAAGGAGAAAAGGAGAAGAAAGATCATA  550

seq1  ATATTAATAGGAAAATTTATGCCCTTTAATCTCAGATGAAATAACTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATAGGAAAATTTATGCCCTTTAATCTCAGATGAAATAACTGAGC  600

seq1  AAAAGTAATTTAAAAATAATAATAGAAGGTAAGAAAGACTGAATAGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAATTTAAAAATAATAATAGAAGGTAAGAAAGACTGAATAGCTCA  650

seq1  TAGGTAGGAAAGCTTATACAGAGCAAAGAATTTCCTTTCATATCTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGAAAGCTTATACAGAGCAAAGAATTTCCTTTCATATCTTGTTT  700

seq1  ATAAAACTTTTCAAACAGTACCTTGAATTCAGCCACAAAGAATATCAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTTTTCAAACAGTACCTTGAATTCAGCCACAAAGAATATCAACT  750

seq1  ATTTCTCTAAGATGGAATGAAAACCTGCATTCTCTCATGACAGTGCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTAAGATGGAATGAAAACCTGCATTCTCTCATGACAGTGCAATT  800

seq1  AATCTATAAATGAATAAATGTGTTAAATATGAAATAGACCACTTTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATAAATGAATAAATGTGTTAAATATGAAATAGACCACTTTGAAAT  850

seq1  GCTATCAAACGTT-AAGGAAAAATGTCTTTCAAATTATAACATTTCCACA  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTATCAAACGTTAAAGGAAAAATGTCTTTCAAATTATAACATTTCCACA  900

seq1  ACTCCTCATTGGTCTACTTGTCCAAGATATTGGTAACTAATACTCCCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCATTGGTCTACTTGTCCAAGATATTGGTAACTAATACTCCCTCT  950

seq1  AAACTTCTGAAGATTAACTATAAACTCTATATGTAGAAGTGAGAATGATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTGAAGATTAACTATAAACTCTATATGTAGAAGTGAGAATGATA  1000

seq1  TTTTCCTTTCTGACTCACTTCATAACACACAATGTATTCTTATATTATCC  1049
      |||||||||||||||||||||||||||||| ||||| ||||||||||| |
seq2  TTTTCCTTTCTGACTCACTTCATAACACAC-ATGTA-TCTTATATTAT-C  1047

seq1  ATAAAACGATTTTATCTTTTAATGTCAGAATAATCTTCCCATATACACAG  1099
      ||||||||||| | |||||  ||||||||   ||||| ||||||||||  
seq2  ATAAAACGATTAT-TCTTT--ATGTCAGA--TATCTT-CCATATACACCA  1091

seq1  CCTCCAAATGTGAGGATTACTAACAAAAGCCACCACACTAACTTCTGACA  1149
       |||  ||||||| || ||||||| |||||||||||||| ||||||||| 
seq2  GCTC--AATGTGAAGAATACTAAC-AAAGCCACCACACT-ACTTCTGAC-  1136

seq1  AAATGTCATAAAAGA  1164
       |||||| |||||||
seq2  -AATGTCCTAAAAGA  1150


seq1: chr5_69980978_69982101
seq2: B6Ng01-214L04.g_64_1186 (reverse)

seq1  CCCATTCGCTGGCCAAGTCATA-GTTATCAAGAATTACAAGCCTCATTAT  49
      |||||||||||  | |||  || ||||||||||  | || ||   |||||
seq2  CCCATTCGCTG--CCAGTACTATGTTATCAAGATATCCAGGCTCAATTAT  48

seq1  GGGTGATGCAC-AGCTCTCGG-TCCAAGAGGTTGAAACCTGTGGAAATTC  97
      || |||||||| |||| |||| ||||||| ||||||| |||| | |||||
seq2  GGTTGATGCACAAGCTTTCGGTTCCAAGA-GTTGAAA-CTGTTGGAATTC  96

seq1  ATAGAGTACTTTAGACATTGTTCAGACACACAGTA-TATGATATGTTGAT  146
      ||||||||| ||||||||  | ||||||||||||| ||||||||||||| 
seq2  ATAGAGTAC-TTAGACATGTTCCAGACACACAGTATTATGATATGTTGA-  144

seq1  TTTAAAAAAGAGCAATACTTAAGGAGGGCATACACACAT-AAAATACAAT  195
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  -TTAAAAAAGAGCAATACTTAAGGAGGGCATACACACATAAAAATACAAT  193

seq1  GCATACCTGAAACAGTACAATACAATTACTA-CCGGGAACAGTAGGAATA  244
      |||||| |||||||||||||||||||||||| |||| |||||||||||||
seq2  GCATACTTGAAACAGTACAATACAATTACTACCCGGAAACAGTAGGAATA  243

seq1  GCACTC-TTTTTTGTCAAAAACGCACTGAGCTTCTGGCATTTTGAGTTAG  293
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  GCACTCTTTTTTTGTCAAAAACGCACTGAGCTTCTGGCA-TTTGAGTTAG  292

seq1  GTCATTTAGATGTATATATTAATCCATAAC-AATCTTGTGAAGAGAACAT  342
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GTCATTTAGATGTATATA-TAATCCATAACAAATCTTGTGAAGAGAACAT  341

seq1  GGACTCACATGACTTGTCTGTGGTCACATCAGTGACACAACAGAATTCAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCACATGACTTGTCTGTGGTCACATCAGTGACACAACAGAATTCAA  391

seq1  ATCCAAATGAAGCCATCACACTACACTATATACAAGTATATTATATTCTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATGAAGCCATCACACTACACTATATACAAGTATATTATATTCTC  441

seq1  TTATCAAAGCAGCCATCCCTGAACAAAACCAAAACAACAACAAAAACCTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAAGCAGCCATCCCTGAACAAAACCAAAACAACAACAAAAACCTA  491

seq1  TCATTTCTTAACTACAAGTTCAGTACTAGAAAGCTTTAGTGCCTTTAAAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTAACTACAAGTTCAGTACTAGAAAGCTTTAGTGCCTTTAAAT  541

seq1  TACTTACCAAAATCCAGAATTTCTGCTAAGAATACCATAATGATCAAATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCAAAATCCAGAATTTCTGCTAAGAATACCATAATGATCAAATT  591

seq1  TCTGTTCTGTGAAACATGTTTAAATCCCACCAGAAATAATTTTCAGCATC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTGTGAAACATGTTTAAATCCCACCAGAAATAATTTTCAGCATC  641

seq1  ATTCTTTATATACCATTGAGATATCGAATGTGCATGCTCATAAGCACGCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATATACCATTGAGATATCGAATGTGCATGCTCATAAGCACGCA  691

seq1  CAAGCAAACACACACACACAAAATGCAGGGAAAGGATTTTATAAGATCAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAACACACACACACAAAATGCAGGGAAAGGATTTTATAAGATCAT  741

seq1  ACTTGACTGAAAGTGCTGGTCTCTTGGAAGAGAAATTCTTCACAAAAATG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTGAAAGTGCTGGTCTCTTGGAAGAGAAATTCTTCACAAAAATG  791

seq1  CAAATTTAGGACCGAAGTGCTTACTCTTTTACTTAAAAAAATATTACTAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAGGACCGAAGTGCTTACTCTTTTACTTAAAAAAATATTACTAA  841

seq1  GAAACTTATATATCCTATATGCAAGAAGCACAAGTCTCAGTTTTAAATTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTATATATCCTATATGCAAGAAGCACAAGTCTCAGTTTTAAATTT  891

seq1  CTATTTTCACGTTTAAATATGTCACTCACCAACACTGACCATTCAATGAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCACGTTTAAATATGTCACTCACCAACACTGACCATTCAATGAC  941

seq1  ATGGTGGCTTCAGCATTCCTGTTCAGTAAAGGCACTTTACACAGAATACT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCTTCAGCATTCCTGTTCAGTAAAGGCACTTTACACAGAATACT  991

seq1  AAATCAAACTGTGTAAGCCAACAGGAACAGAACGTCTAATAACCAATACA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAACTGTGTAAGCCAACAGGAACAGAACGTCTAATAACCAATACA  1041

seq1  TGGAAACTAAATGATATTCTTAAGAACAGGACTTAGAATTCTAAAACAAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTAAATGATATTCTTAAGAACAGGACTTAGAATTCTAAAACAAC  1091

seq1  AAAAAAAGTATGATCACTATAATCTAGAATTC  1124
      ||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTATGATCACTATAATCTAGAATTC  1123


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