BAC Information

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BAC

Clone NameB6Ng01-219N24
Chromosome5 (Build37)
Map Location 15,131,921 - 15,132,917
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3e, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d
Downstream gene4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1, LOC668121, Hgf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219N24.bB6Ng01-219N24.g
ACCGA035584GA035585
length1,0611,012
definitionB6Ng01-219N24.b B6Ng01-219N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcaatttgatacagagagaacagtacaaagaatccgtgaaac
caagatcctgttctttgagacaatcaacaaggtagacttatgcttagcca
aattaactgaaaggtagagagacaatacccagaatagcaaaatcagaaat
gaaacaggagacataacaatggacactgaggaaattgaaagaatcactag
gtcttactgcagaagcctgtactgcaaaaaatagcaaaatccaaatgaaa
tgggtgacttatagacagctatcaattatcaaagttagatgaagatctgg
taaagtaactaacaggcctataacccctaagaaaatagaaacagtcatca
aaagtcctccactctaaaaaagcccaagggcagaaagttgtagtgcagaa
ttctactagatattcaaaaaagagttagtgaaatactcctcaaattattc
acaaagtagaaacagaaaaaacatagctaaactcattctatgagttcata
gtcaccctgatacagaaaccacacaaagactcaacaaagaaagaggaatt
cagtccaatttctcttttttaaccacttcatactaatttacttatcttca
taataaggaagaatatgtcttccttgtgtatttaaaattatgagattaga
tacagatattggacagaaggtaattgggttcataagaagtgatacataat
agaatagaacatgttcatggatttggagtcagtcaggactatgctgtgta
ttggttattgaaaattaatatcagagtgacacagttgtgtgtctttagga
agatgactggtgggagacactgatcctaaaatgccttctctattttagtc
tattttcctagaaaacataggaaaaaagagtatattggggtacatccaga
aacaggtctgggagccattaaatattcccagaggaaaagtttcaaccagt
tgctaaaagtgttttaccaagtgggatcaagatatcctttcaatacaatt
ggtgtgaaatgggtgagcgaaagcttaactatcatctcttccactttctc
tctactttggg

gaattcacatcttatttccataaaacatatatgctgtagcatacatacat
acacacaaacacacatacacacatgcacacatacatacacacatacacac
atacacacatacacacacacacacacacacatacacacatacacacatac
acacatacacacatacaattggtttgtctgtttagtttttgatgggtttg
aggtgtggttgttgttggtttgtttttgaaacagcgtctgtctatgtagc
cctggctgtcatggaatttgctttgtagaccaggctggcctcaaattcag
atattcaccttcttctgtcttctgagaactagtagtcaagtctcctcagc
cagcagtttgaactgttggattaaagcttttggacatttgcctactttat
cttttctgttaagatagaaaaaaggatagcctattattcaaatttactca
gaaaattattttatagtcagtcatggctggaatgcagatataaaaaaatc
agattgtttggaacttaaaaaaaaaagataaaaagtttaagaaactcttt
aaaaatttcccttttcaaaactgactggccattcatatagctcatgaatc
ttaaggtttaacagtataaaatgagtagcctcagctttatttcagtttgt
cttaaatttaatttagggtttaatcatgtgtctatagacctgtacttttt
atcatcgtgttattttttccttataacttaactgttaacattaatagacc
tcaaaaaaaataaattacatttaaaatcgggatgagcacaagatgttcag
aatttgttagcaaacatcttgcttttgttactgtagcttctaggcaccca
agtaccagccatttctggggattttctgttaacgccgaagtgacttagga
attgcctttgctcatctggtgtcttacacgtcaaagagattccaagtgac
gtgataaaggaaaggaaaggaaacagaagtggatcattttctgggatgag
catgagccacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15131921_15132917
seq2: B6Ng01-219N24.b_110_1104

seq1  GAGACAATCAACAAGGTAGACTTATGCTTAGCCAAATTAACTGAAAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAATCAACAAGGTAGACTTATGCTTAGCCAAATTAACTGAAAGGTA  50

seq1  GAGAGACAATACCCAGAATAGCAAAATCAGAAATGAAACAGGAGACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAATACCCAGAATAGCAAAATCAGAAATGAAACAGGAGACATAA  100

seq1  CAATGGACACTGAGGTAATTGAAAGAATCACTAGGTCTTACTGCAGAAGC  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAATGGACACTGAGGAAATTGAAAGAATCACTAGGTCTTACTGCAGAAGC  150

seq1  CTGTACTGCAAAAAATAGCAAAATCCAAATGAAATGGGTGACTTATAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGCAAAAAATAGCAAAATCCAAATGAAATGGGTGACTTATAGAC  200

seq1  AGCTATCAATTATCAAAGTTAAATGAAGATCTGGTAAAGTAACTAACAGG  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGCTATCAATTATCAAAGTTAGATGAAGATCTGGTAAAGTAACTAACAGG  250

seq1  CCTATAACCCCTAAGGAAATAGAAACAGTCATCAAAAGTCCTCCACTCCA  300
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  CCTATAACCCCTAAGAAAATAGAAACAGTCATCAAAAGTCCTCCACTCTA  300

seq1  AAAAAGCCCAAGGGCAGAAAGTTGTAGTGCAGAATTCTACTAGATATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCCAAGGGCAGAAAGTTGTAGTGCAGAATTCTACTAGATATTCA  350

seq1  AAAAAGAGTTATTGAAATACTCCTCAAATTATTCATAAAGTAGTAACAGA  400
      ||||||||||| ||||||||||||||||||||||| ||||||| ||||||
seq2  AAAAAGAGTTAGTGAAATACTCCTCAAATTATTCACAAAGTAGAAACAGA  400

seq1  AGAAAAATAGCTAAACTCATTCTATGAGTTCATAGTCACCCTGATACAGA  450
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATAGCTAAACTCATTCTATGAGTTCATAGTCACCCTGATACAGA  450

seq1  AACCACACAAAGACTCAACAAAGAAAGAGGAATTCGGTCCAATTTCTCTT  500
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACCACACAAAGACTCAACAAAGAAAGAGGAATTCAGTCCAATTTCTCTT  500

seq1  TTTTAACCACTTCATACTAATTTACTTATCTTCATAATAAGGAAGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCACTTCATACTAATTTACTTATCTTCATAATAAGGAAGAATAT  550

seq1  GTCTTCCTTGTGTATTTAAAATTATGAGATTAGATACTCATATTGGACAG  600
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  GTCTTCCTTGTGTATTTAAAATTATGAGATTAGATACAGATATTGGACAG  600

seq1  AAGGTAATTGGGTTCATAAGAAGTGATACATAATAGAAAAGAACATGTTC  650
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGTAATTGGGTTCATAAGAAGTGATACATAATAGAATAGAACATGTTC  650

seq1  ATGGATTTGG----AGTCAGGACTATGCTGTGTATTGGTTATTGAAAATT  696
      ||||||||||    ||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTGGAGTCAGTCAGGACTATGCTGTGTATTGGTTATTGAAAATT  700

seq1  AATATCAGAGTGACACAGTTGTGTGTCTTTAGGAAGATGACTGGTGGGAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGAGTGACACAGTTGTGTGTCTTTAGGAAGATGACTGGTGGGAG  750

seq1  ACACTGATCCTAAAATGCCTTCTGTATTTTAGTCCA---TACAGAAAAAC  793
      ||||||||||||||||||||||| |||||||||| |   | |   |||||
seq2  ACACTGATCCTAAAATGCCTTCTCTATTTTAGTCTATTTTCCTAGAAAAC  800

seq1  ATAGGAAAAAAAGAATATATTGGAGTACATCCAGGAAACAGTTCTGGAAG  843
      ||||| |||||||| |||||||| ||||||||| ||||||| ||||| ||
seq2  ATAGG-AAAAAAGAGTATATTGGGGTACATCCA-GAAACAGGTCTGGGAG  848

seq1  CCATTAAATATTCCCAGAGGAAAAGTTTCAACCAGTTGCTAAAAGTGTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCATTAAATATTCCCAGAGGAAAAGTTTCAACCAGTTGCTAAAAGTG-TT  897

seq1  TTACCAGGTGGGATGAAAGATATCCTTTCAAATACAATTGGTGTGAAATG  943
      |||||| |||||||  ||||||||||||| ||||||||||||||||||||
seq2  TTACCAAGTGGGAT-CAAGATATCCTTTC-AATACAATTGGTGTGAAATG  945

seq1  GGTGAGCGAAAGCTTTACCTATTCACCCTCT-TTCCACTTTCTCTCTACT  992
      ||||||||||||| ||| ||||    | ||| ||||||||||||||||||
seq2  GGTGAGCGAAAGC-TTAACTAT----CATCTCTTCCACTTTCTCTCTACT  990

seq1  TTGGG  997
      |||||
seq2  TTGGG  995


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