BAC Information

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BAC

Clone NameB6Ng01-221A17
Chromosome5 (Build37)
Map Location 126,809,258 - 126,935,726
singlet/doubletdoublet
Overlap genenone
Upstream geneScarb1, Ubc, Dhx37, Bri3bp, Aacs, Tmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221A17.bB6Ng01-221A17.g
ACCGA036445GA036446
length325888
definitionB6Ng01-221A17.b B6Ng01-221A17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,809,258 - 126,809,582)(126,934,840 - 126,935,726)
sequence
agaaatcttgaaaacagagtgaccaatggcctgggcttccaagtcagggg
tttgataaacgcaagcctctaattcctgttctgcctgcccatccatccat
ccatccatccatctgtctgtctgtctgtttaactatctatcatgagatta
tatcacttctccccacataaaggaatatgccaactatccccttgatactc
agcaaagacaaaaatgaccttaatggttgaggaaacaactcagcagatag
gaatgctttctcaacaggcatgaggactgagtccatctctccagcatcac
atttaaaaagggggggggggaggtg

gaattctcacccgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatcgttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagttagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactatggaaatcagtctggcggttccata
gataaacttttaaaagatatttaggtacttggaaaaatgaaatagtgtgg
aatatgggagatataaaaacttaaaaattgagttcatggtttatacatca
tttatattgataaccatgcttgtttacctgcatactacctttttatacat
gatatcttagctcgttagttgaaaaaaattcaaaagacaagtcgctctgt
agcaggagcaaacagtaaacctcaagtcttaccgtctagtagagagggaa
gtcccatccacccacctctaccccctccaaccccccacttccactcccac
tcctgccttgcacacatgctgtagaggacaaagtgagctcttctctgatg
gaacgagccatgagtagcagaggtgaaaaggattcagttcagtgtacaga
aatggtttcacatagcccttacagaccaggggcccttaggagatcccagt
tggcttcttcagagatgactcttgggtgatagatgtagagatggatggga
aagaacagaaggcaataggaatgtcagtcactgcccatggactgggagga
cagcaaaacaaaaatcccagcagctgacatggtatctataagatgatgtc
cacacaactctctggctaccctggggcctcatcagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126809258_126809582
seq2: B6Ng01-221A17.b_49_373

seq1  AGAAATCTTGAAAACAGAGTGACCAATGGCCTGGGCTTCCAAGTCAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTGAAAACAGAGTGACCAATGGCCTGGGCTTCCAAGTCAGGGG  50

seq1  TTTGATAAACGCAAGCCTCTAATTCCTGTTCTGCCTGCCCATCCATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAAACGCAAGCCTCTAATTCCTGTTCTGCCTGCCCATCCATCCAT  100

seq1  CCATCCATCCATCTGTCTGTCTGTCTGTTTAACTATCTATCATGAGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCTGTCTGTCTGTCTGTTTAACTATCTATCATGAGATTA  150

seq1  TATCACTTCTCCCCACATAAAGGAATATGCCAACTATCCCCTTGATACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTTCTCCCCACATAAAGGAATATGCCAACTATCCCCTTGATACTC  200

seq1  AGCAAAGACAAAAATGACCTTAATGGTTGAGGAAACAACTCAGCAGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGACAAAAATGACCTTAATGGTTGAGGAAACAACTCAGCAGATAG  250

seq1  GAATGCTTTCTCAACAGGCATGAGGACTGAGTCCATCTCTCCAGCATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTTCTCAACAGGCATGAGGACTGAGTCCATCTCTCCAGCATCAC  300

seq1  ATTTAAAAAGGGGGGGGGGGAGGTG  325
      |||||||||||||||||||||||||
seq2  ATTTAAAAAGGGGGGGGGGGAGGTG  325


seq1: chr5_126934840_126935726
seq2: B6Ng01-221A17.g_68_955 (reverse)

seq1  CTGCTGATGAGG-CCCAGGGTAGCCAGAGAGTTGTGTTGGACATCATCTT  49
      || ||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  CTACTGATGAGGCCCCAGGGTAGCCAGAGAGTTGTG-TGGACATCATCTT  49

seq1  ATAGATACCATGTCAGCTGCT-GGATTTTTGTTTTGCTGTCCTCCCAGTC  98
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATAGATACCATGTCAGCTGCTGGGATTTTTGTTTTGCTGTCCTCCCAGTC  99

seq1  CATGGGCAGTGACTGACATTCCTATTGCCTTCTGTTCTTTCCCATCCATC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCAGTGACTGACATTCCTATTGCCTTCTGTTCTTTCCCATCCATC  149

seq1  TCTACATCTATCACCCAAGAGTCATCTCTGAAGAAGCCAACTGGGATCTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCTATCACCCAAGAGTCATCTCTGAAGAAGCCAACTGGGATCTC  199

seq1  CTAAGGGCCCCTGGTCTGTAAGGGCTATGTGAAACCATTTCTGTACACTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGCCCCTGGTCTGTAAGGGCTATGTGAAACCATTTCTGTACACTG  249

seq1  AACTGAATCCTTTTCACCTCTGCTACTCATGGCTCGTTCCATCAGAGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCCTTTTCACCTCTGCTACTCATGGCTCGTTCCATCAGAGAAG  299

seq1  AGCTCACTTTGTCCTCTACAGCATGTGTGCAAGGCAGGAGTGGGAGTGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTTTGTCCTCTACAGCATGTGTGCAAGGCAGGAGTGGGAGTGGA  349

seq1  AGTGGGGGGTTGGAGGGGGTAGAGGTGGGTGGATGGGACTTCCCTCTCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGGTTGGAGGGGGTAGAGGTGGGTGGATGGGACTTCCCTCTCTA  399

seq1  CTAGACGGTAAGACTTGAGGTTTACTGTTTGCTCCTGCTACAGAGCGACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACGGTAAGACTTGAGGTTTACTGTTTGCTCCTGCTACAGAGCGACT  449

seq1  TGTCTTTTGAATTTTTTTCAACTAACGAGCTAAGATATCATGTATAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTGAATTTTTTTCAACTAACGAGCTAAGATATCATGTATAAAAA  499

seq1  GGTAGTATGCAGGTAAACAAGCATGGTTATCAATATAAATGATGTATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTATGCAGGTAAACAAGCATGGTTATCAATATAAATGATGTATAAA  549

seq1  CCATGAACTCAATTTTTAAGTTTTTATATCTCCCATATTCCACACTATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAACTCAATTTTTAAGTTTTTATATCTCCCATATTCCACACTATTT  599

seq1  CATTTTTCCAAGTACCTAAATATCTTTTAAAAGTTTATCTATGGAACCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCCAAGTACCTAAATATCTTTTAAAAGTTTATCTATGGAACCGC  649

seq1  CAGACTGATTTCCATAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGATTTCCATAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG  699

seq1  GAGAAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTG  749

seq1  AATTTTTGATCTTAGCCATTCTAACTGGTGTGAGATGGAATCTCAGGGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGATCTTAGCCATTCTAACTGGTGTGAGATGGAATCTCAGGGTT  799

seq1  GTTTTGATTTGCATTTCTCTGATGATTAACGATGTTGAACATTTTTTCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATTTGCATTTCTCTGATGATTAACGATGTTGAACATTTTTTCAG  849

seq1  GTGCTTCTCAGCCATTCGGTATTCCTCGGGTGAGAATTC  887
      |||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTCAGCCATTCGGTATTCCTCGGGTGAGAATTC  888


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