BAC Information

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BAC

Clone NameB6Ng01-221L10
Chromosome5 (Build37)
Map Location 78,681,569 - 78,682,636
singlet/doubletsinglet
Overlap geneLOC100039398
Upstream geneRest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneMthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221L10.bB6Ng01-221L10.g
ACCGA036932GA036933
length7561,087
definitionB6Ng01-221L10.b B6Ng01-221L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtcttggattttg
tcaaatgctttctccacctctaaggagatgatcatgtggttttgtctttg
agtttgcttatataatggattacgttggtggatttccatatattaaacca
tacctgcatccctggtttaaaacccacttggtcaggatgtatgattgttt
taatgtgtacttggattttggtagcaagaattttattgagtatttttgca
taaatatacataagggaaattggtctgaagttatctttgttgggtctttc
tgtggtttaggtatcagagaaattgtggcttcatagaatgaattgggtaa
agtaccttctgcttctattttgtggaatagtttgtgccaaactagaatta
gatcttctccgaaggtctgatagaactctgcactaaacccatctggtcct
gggctttttttggttgggagactattaatgactgcttctatttctttagg
ggatatgggactgttttgatctttaacttgatcctgatttaactttggta
cctagtatctgtctagaaatttgtccattttatccgggttttccagtttt
gttgaatatagccttttgtagaaggatctgatggtgttttggatttcttc
aatatttgtttttatgtcttcccttttcatttctgattttgttaattagg
atgctgtccctgtactctctagtactggtacatatgggtaatatgagtct
ggctca

gaattccttttgcttacccgattttctactttctactctactcattccta
taggccataggtttattgaattgacaggtgatctatccatccaatacaca
agatattctccctaaagtgggtagagctgatgttcccaagagtctccagt
cctagctgagttttggcaattgaaaacttctgggtaagtcaagccgtttc
tctctataaatgtggctgcgggtaggttgtctgtggcccagtagatagcc
tttaaatttatcagaataagttggggccatatacaaaggtataccaaagt
caaatcaagacagccaggcccaagagctgatgatcaaacacatcagatcg
agagacgggtgtgatactttcatttgaactccataaacaggacaattagt
gctgttattgcaacagtctccaccaacttgttgcttcagcatctagtgta
cacagcaaggaaccagcagagagagaactccagatgatcccaggggcctc
agcttgactctgtcatccattcgggcctgctctttccctttacaaaatcc
gtggtcctgcatcttccttctgaagttcaactcagccatagatctcagct
aaactctggcctgtggcttaacctgaagcatagacctccagcagagtttg
atatcttattttcatggagatactttctgcattcctatcacacacctgct
tctagttaggactccttgaaacatcttgaaccctgctgtggcctctttaa
ctgtttaaagctattcctaaagcctatatctgcagaattactgttatgtg
tagtatgtgacctgggagtcaatattttgtaattaaaaataagtaataaa
aaaatccttatgtttgtcttgaccttatgtcaaaggaagtcaaggactag
tttgcaaaattgctgtcagtgaaatctgatgtaggtggatgaatttcatt
gttatttccataaatttcaaacactgtagaaaggacccaaagcatgttgg
aatctattttgtttttcttgaaagcatatttaatgaaattaaacttgaga
atttatacttaattaaattaaacttatttaatgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78681569_78682636
seq2: B6Ng01-221L10.g_68_1154

seq1  GAATTCCTTTTGCTTACCCGATTTTCTACTTTCTACTCTACTCATTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGCTTACCCGATTTTCTACTTTCTACTCTACTCATTCCTA  50

seq1  TAGGCCATAGGTTTATTGAATTGACAGGTGATCTATCCATCCAATACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATAGGTTTATTGAATTGACAGGTGATCTATCCATCCAATACACA  100

seq1  AGATATTCTCCCTAAAGTGGGTAGAGCTGATGTTCCCAAGAGTCTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTCTCCCTAAAGTGGGTAGAGCTGATGTTCCCAAGAGTCTCCAGT  150

seq1  CCTAGCTGAGTTTTGGCAATTGAAAACTTCTGGGTAAGTCAAGCCGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGAGTTTTGGCAATTGAAAACTTCTGGGTAAGTCAAGCCGTTTC  200

seq1  TCTCTATAAATGTGGCTGCGGGTAGGTTGTCTGTGGCCCAGTAGATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATAAATGTGGCTGCGGGTAGGTTGTCTGTGGCCCAGTAGATAGCC  250

seq1  TTTAAATTTATCAGAATAAGTTGGGGCCATATACAAAGGTATACCAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTATCAGAATAAGTTGGGGCCATATACAAAGGTATACCAAAGT  300

seq1  CAAATCAAGACAGCCAGGCCCAAGAGCTGATGATCAAACACATCAGATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAGACAGCCAGGCCCAAGAGCTGATGATCAAACACATCAGATCG  350

seq1  AGAGACGGGTGTGATACTTTCATTTGAACTCCATAAACAGGACAATTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGGGTGTGATACTTTCATTTGAACTCCATAAACAGGACAATTAGT  400

seq1  GCTGTTATTGCAACAGTCTCCACCAACTTGTTGCTTCAGCATCTAGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTATTGCAACAGTCTCCACCAACTTGTTGCTTCAGCATCTAGTGTA  450

seq1  CACAGCAAGGAACCAGCAGAGAGAGAACTCCAGATGATCCCAGGGGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAGGAACCAGCAGAGAGAGAACTCCAGATGATCCCAGGGGCCTC  500

seq1  AGCTTGACTCTGTCATCCATTCGGGCCTGCTCTTTCCCTTTACAAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGACTCTGTCATCCATTCGGGCCTGCTCTTTCCCTTTACAAAATCC  550

seq1  GTGGTCCTGCATCTTCCTTCTGAAGTTCAACTCAGCCATAGATCTCAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCTGCATCTTCCTTCTGAAGTTCAACTCAGCCATAGATCTCAGCT  600

seq1  AAACTCTGGCCTGTGGCTTAACCTGAAGCATAGACCTCCAGCAGAGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGGCCTGTGGCTTAACCTGAAGCATAGACCTCCAGCAGAGTTTG  650

seq1  ATATCTTATTTTCATGGAGATACTTTCTGCATTCCTATCACACACCTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTATTTTCATGGAGATACTTTCTGCATTCCTATCACACACCTGCT  700

seq1  TCTAGTTAGGACTCCTTGAAACATCTTGAACCCTGCTGTGGCCTCTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTAGGACTCCTTGAAACATCTTGAACCCTGCTGTGGCCTCTTTAA  750

seq1  CTGTTTAAAGCTATTCCTAAAGCCTATATCTGCAGAATTACTGTTATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAAGCTATTCCTAAAGCCTATATCTGCAGAATTACTGTTATGTG  800

seq1  TAGTATGTGACCTGGGAGTCAATA-TTTGTAATTAAAA--TAGTAATAAA  847
      |||||||||||||||||||||||| |||||||||||||   |||||||||
seq2  TAGTATGTGACCTGGGAGTCAATATTTTGTAATTAAAAATAAGTAATAAA  850

seq1  AAAATCCTTATGTTTGTCTTGACCTTATGTCAAAGGAAGTCAA-GACTAG  896
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAATCCTTATGTTTGTCTTGACCTTATGTCAAAGGAAGTCAAGGACTAG  900

seq1  TTTGC-AAATTGCTGTCAGTG-AATCTGATGTA-GTTGATGAA-TTCATT  942
      ||||| ||||||||||||||| ||||||||||| || |||||| ||||||
seq2  TTTGCAAAATTGCTGTCAGTGAAATCTGATGTAGGTGGATGAATTTCATT  950

seq1  GTTA-TTCCATAAA-TTCAAACACTGTAGAAA-GACCC-AAGCATGTTG-  987
      |||| ||||||||| ||||||||||||||||| ||||| |||||||||| 
seq2  GTTATTTCCATAAATTTCAAACACTGTAGAAAGGACCCAAAGCATGTTGG  1000

seq1  -ATCTA-TTTGTTTTTC-TGAAAGCATATTT-ATGAAATT-AACTT-AGA  1031
       ||||| |||||||||| ||||||||||||| |||||||| ||||| |||
seq2  AATCTATTTTGTTTTTCTTGAAAGCATATTTAATGAAATTAAACTTGAGA  1050

seq1  TTTTATACTTATATTTAATTAAA-TTATTTAATGTATT  1068
       |||||||||| ||| ||||||| ||||||||||||||
seq2  ATTTATACTTA-ATTAAATTAAACTTATTTAATGTATT  1087


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