BAC Information

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BAC

Clone NameB6Ng01-223A02
Chromosome5 (Build37)
Map Location 143,564,232 - 143,712,402
singlet/doubletdoublet
Overlap geneZfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb
Upstream geneSdk1, LOC666727, Foxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2, Wipi2, Slc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888
Downstream geneFscn1, 2810055G22Rik, LOC667809, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12, Zfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223A02.bB6Ng01-223A02.g
ACCGA037868GA037869
length834306
definitionB6Ng01-223A02.b B6Ng01-223A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,711,574 - 143,712,402)(143,564,232 - 143,564,537)
sequence
gaattctgtgaaacaaggcaatcgtggccagtgcttggcaagagcctggc
taattaagagggcactttagtgtcatgggcagagccaggctcatgccaag
atatctctgccagaagaggggccaccggctgctgccaggctttggccttg
cccgcctggcagccaccccagcttaccctctcagagacagtcagggctcc
acttctggtgagctggggcccagtgtctggccttgggtcccatctgtcct
tcgaagtgcctggccctcaggcaactcctccctgagctggagcaagcaga
gccggcttccataacccagtctcgagcttctcccagatccagtaaactct
gagcactcttccagtgttcaagagagagaaatagccagccatggtggcac
acaggtgtagtcccagtccccagcgtgccgaagcaggagaattaccaaga
gtttgagaggctaaagagacaactcagatcagcttaagagcacttacaag
ctgtgtagtgatggcacacgcctttaatcccagcacttgggaggcagagg
caagcggatctcttggttcgaggccagccaggtctacagaaggagtataa
gaacagcttgtctacagagggagttccaggacagccaaggctactcgaag
aaaccctgtctcaagaaaggaaagaaaaaaaaaagagtgcttgaggttgt
ttcagaggcagcaaccttggctcccagcatccacgccagtaactgcagct
ctggggagacctgaaacccaccctccgtgtccctccttcaaggcttccat
gtgcagttggctggaagtcagaatcagagtctat
acttttaaaggaatgagacttgtctgggctgggtttaggcagagggcaaa
gctaggcggaaacccaagtgcttaaatggctacagtactctcacccaagg
caaaaaagaaaagtatcaaagccaggctccagatatgcctggccctgcgg
tccaggcactcggcaggagaaggctgaggcagagtagacctcaaggtcag
ccacataacaattgtctcaaaaaaaaaaaaaatacagaaagagagagaga
gagagagagagagagagagagagagaggaaggaaggaaggaaggaaggaa
ggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_143711574_143712402
seq2: B6Ng01-223A02.b_47_879 (reverse)

seq1  TAGACTCTGATTCTGACTTCCAGCC-ACTGCACATGG-AGCCTTG-AGGA  47
      ||||||||||||||||||||||||| ||||||||||| ||||||| ||||
seq2  TAGACTCTGATTCTGACTTCCAGCCAACTGCACATGGAAGCCTTGAAGGA  50

seq1  GGGACACGGAGGGTGGGTTTCAGGTCT-CCCAGAGCTGCAGTTACTGGCG  96
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGACACGGAGGGTGGGTTTCAGGTCTCCCCAGAGCTGCAGTTACTGGCG  100

seq1  TGGATGCTGGGAGCCAAGGTTGCTGCCTCTGAAACAACCTCAAGCACTCT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGGGAGCCAAGGTTGCTGCCTCTGAAACAACCTCAAGCACTCT  150

seq1  TTTTTTTTTCTTTCCTTTCTTGAGACAGGGTTTCTTCGAGTAGCCTTGGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTTTCCTTTCTTGAGACAGGGTTTCTTCGAGTAGCCTTGGC  200

seq1  TGTCCTGGAACTCCCTCTGTAGACAAGCTGTTCTTATACTCCTTCTGTAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAACTCCCTCTGTAGACAAGCTGTTCTTATACTCCTTCTGTAG  250

seq1  ACCTGGCTGGCCTCGAACCAAGAGATCCGCTTGCCTCTGCCTCCCAAGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTGGCCTCGAACCAAGAGATCCGCTTGCCTCTGCCTCCCAAGTG  300

seq1  CTGGGATTAAAGGCGTGTGCCATCACTACACAGCTTGTAAGTGCTCTTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCGTGTGCCATCACTACACAGCTTGTAAGTGCTCTTAA  350

seq1  GCTGATCTGAGTTGTCTCTTTAGCCTCTCAAACTCTTGGTAATTCTCCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCTGAGTTGTCTCTTTAGCCTCTCAAACTCTTGGTAATTCTCCTG  400

seq1  CTTCGGCACGCTGGGGACTGGGACTACACCTGTGTGCCACCATGGCTGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGCACGCTGGGGACTGGGACTACACCTGTGTGCCACCATGGCTGGC  450

seq1  TATTTCTCTCTCTTGAACACTGGAAGAGTGCTCAGAGTTTACTGGATCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTCTCTTGAACACTGGAAGAGTGCTCAGAGTTTACTGGATCTG  500

seq1  GGAGAAGCTCGAGACTGGGTTATGGAAGCCGGCTCTGCTTGCTCCAGCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCTCGAGACTGGGTTATGGAAGCCGGCTCTGCTTGCTCCAGCTC  550

seq1  AGGGAGGAGTTGCCTGAGGGCCAGGCACTTCGAAGGACAGATGGGACCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGTTGCCTGAGGGCCAGGCACTTCGAAGGACAGATGGGACCCA  600

seq1  AGGCCAGACACTGGGCCCCAGCTCACCAGAAGTGGAGCCCTGACTGTCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGACACTGGGCCCCAGCTCACCAGAAGTGGAGCCCTGACTGTCTC  650

seq1  TGAGAGGGTAAGCTGGGGTGGCTGCCAGGCGGGCAAGGCCAAAGCCTGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGTAAGCTGGGGTGGCTGCCAGGCGGGCAAGGCCAAAGCCTGGC  700

seq1  AGCAGCCGGTGGCCCCTCTTCTGGCAGAGATATCTTGGCATGAGCCTGGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCGGTGGCCCCTCTTCTGGCAGAGATATCTTGGCATGAGCCTGGC  750

seq1  TCTGCCCATGACACTAAAGTGCCCTCTTAATTAGCCAGGCTCTTGCCAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCATGACACTAAAGTGCCCTCTTAATTAGCCAGGCTCTTGCCAAG  800

seq1  CACTGGCCACGATTGCCTTGTTTCACAGAATTC  829
      |||||||||||||||||||||||||||||||||
seq2  CACTGGCCACGATTGCCTTGTTTCACAGAATTC  833

seq1: chr5_143564232_143564537
seq2: B6Ng01-223A02.g_71_376

seq1  ACTTTTAAAGGAATGAGACTTGTCTGGGCTGGGTTTAGGCAGAGGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAAGGAATGAGACTTGTCTGGGCTGGGTTTAGGCAGAGGGCAAA  50

seq1  GCTAGGCGGAAACCCAAGTGCTTAAATGGCTACAGTACTCTCACCCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCGGAAACCCAAGTGCTTAAATGGCTACAGTACTCTCACCCAAGG  100

seq1  CAAAAAAGAAAAGTATCAAAGCCAGGCTCCAGATATGCCTGGCCCTGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGAAAAGTATCAAAGCCAGGCTCCAGATATGCCTGGCCCTGCGG  150

seq1  TCCAGGCACTCGGCAGGAGAAGGCTGAGGCAGAGTAGACCTCAAGGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCACTCGGCAGGAGAAGGCTGAGGCAGAGTAGACCTCAAGGTCAG  200

seq1  CCACATAACAATTGTCTCAAAAAAAAAAAAAATACAGAAAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAACAATTGTCTCAAAAAAAAAAAAAATACAGAAAGAGAGAGAGA  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAA  300

seq1  GGAAGG  306
      ||||||
seq2  GGAAGG  306