MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-223H05
Chromosome	5 (Build37)
Map Location	28,487,655 - 28,539,435
singlet/doublet	doublet
Overlap gene	En2, Cnpy1
Upstream gene	Dpp6, Speer4b, Paxip1, Htr5a, EG433862, LOC231069, Insig1
Downstream gene	Prr8, Shh, LOC100039258, Rnf32
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13483 MGI:94921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Speer4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73526 MGI:1920776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paxip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55982 MGI:1890430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433862 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins

name	LOC231069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231069
definition	note : microfibrillar-associated protein 1 pseudogene pseudo : _no_value

name	Insig1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231070 MGI:1916289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	En2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnpy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269637 MGI:2442451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins

name	Shh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20423 MGI:98297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2374 ESTs, 22 Proteins

name	Rnf32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56874 MGI:1861747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24429567 GeneID:13483 MGI:94921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dipeptidylpeptidase 6 transcript_id : NM_010075.1

name	Speer4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21735468 GeneID:73526 MGI:1920776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 4b transcript_id : NM_028561.1

name	Paxip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734450 GeneID:55982 MGI:1890430
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAX interacting (with transcription-activation domain) protein 1 transcript_id : NM_018878.2

name	Htr5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370344 GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 5A transcript_id : NM_008314.2

name	EG433862 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374625 GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins product : predicted gene, EG433862 transcript_id : XM_485584.3

name	Insig1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378164 GeneID:231070 MGI:1916289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 1 transcript_id : NM_153526.3

name	En2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385154 GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engrailed 2 transcript_id : NM_010134.3

name	Cnpy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369857 GeneID:269637 MGI:2442451
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : canopy 1 homolog (zebrafish) transcript_id : NM_175651.3

name	Prr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374627 GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins product : proline rich 8, transcript variant 1 transcript_id : XM_355585.5

name	Shh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254618 GeneID:20423 MGI:98297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sonic hedgehog transcript_id : NM_009170.2

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253820 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 mRNAs, 1189 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472557.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253818 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2372 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472531.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253822 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 288 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472580.1

name	Rnf32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354274 GeneID:56874 MGI:1861747
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 32 transcript_id : NM_021470.4

name	Dpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24429568 CCDS:CCDS19139.1 GeneID:13483 MGI:94921
definition	codon_start : 1 note : inversion, Chr 5, Harwell 6, proximal product : dipeptidylpeptidase 6 protein_id : NP_034205.1

name	Speer4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735469 CCDS:CCDS19140.1 GeneID:73526 MGI:1920776
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : sperm-associated glutamate (E)-rich protein 4b; spermatogenic-associated glutamate (E)-rich protein 4b product : spermatogenesis associated glutamate (E)-rich protein 4b protein_id : NP_082837.1

name	Paxip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734451 GeneID:55982 MGI:1890430
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : Pax transcription activation domain interacting protein protein_id : NP_061366.2

name	Htr5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370345 CCDS:CCDS19141.1 GeneID:15563 MGI:96283
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine receptor 5A protein_id : NP_032340.2

name	EG433862 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374626 GeneID:433862 MGI:3642937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_485584.3

name	Insig1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943846 CCDS:CCDS19142.1 GeneID:231070 MGI:1916289
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 note : INSIG-1 membrane protein product : insulin induced gene 1 protein_id : NP_705746.1

name	En2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753752 CCDS:CCDS19143.1 GeneID:13799 MGI:95390
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030902 - hindbrain development [Evidence IGI]; GO:0030901 - midbrain development [Evidence IGI]; GO:0048666 - neuron development [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : engrailed 2 protein_id : NP_034264.1

name	Cnpy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316752 CCDS:CCDS19144.1 GeneID:269637 MGI:2442451
definition	codon_start : 1 product : canopy 1 homolog protein_id : NP_783582.1

name	Prr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374628 GeneID:381626 MGI:1919670
definition	codon_start : 1 product : proline rich 8 isoform 1 protein_id : XP_355585.5

name	Shh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21617861 CCDS:CCDS19146.1 GeneID:20423 MGI:98297
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0043237 - laminin-1 binding [Evidence IDA]; GO:0005113 - patched binding [Evidence IPI]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008209 - androgen metabolism [Evidence IMP]; GO:0001525 - angiogenesis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IDA] [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007154 - cell communication [Evidence IEA]; GO:0048468 - cell development [Evidence IMP]; GO:0001708 - cell fate specification [Evidence IGI] [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0009790 - embryonic development [Evidence IGI]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0048598 - embryonic morphogenesis [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IDA] [Evidence IMP]; GO:0030900 - forebrain development [Evidence IGI]; GO:0007507 - heart development [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP] [Evidence IGI]; GO:0016539 - intein-mediated protein splicing [Evidence IEA]; GO:0030324 - lung development [Evidence IMP] [Evidence IGI]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0001656 - metanephros development [Evidence IMP]; GO:0030901 - midbrain development [Evidence IGI]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP] [Evidence IDA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0007405 - neuroblast proliferation [Evidence IDA]; GO:0048663 - neuron fate commitment [Evidence IMP]; GO:0014003 - oligodendrocyte development [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0030850 - prostate gland development [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IDA]; GO:0030162 - regulation of proteolysis [Evidence IDA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence TAS]; GO:0007224 - smoothened signaling pathway [Evidence IGI] [Evidence IDA]; GO:0051146 - striated muscle cell differentiation [Evidence IMP] [Evidence IDA]; GO:0001658 - ureteric bud branching [Evidence IMP]; GO:0001570 - vasculogenesis [Evidence IDA] codon_start : 1 note : short digits product : sonic hedgehog protein_id : NP_033196.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253819 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472581.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253821 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472607.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253823 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472630.1

name	Rnf32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981166 GeneID:56874 MGI:1861747
definition	GO_component : GO:0016235 - aggresome [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : limb region 2 product : ring finger protein 32 protein_id : NP_067445.2

clone name	MSMg01-460N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-270D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-223H05.b	B6Ng01-223H05.g
ACC	GA038189	GA038190
length	1,184	1,104
definition	B6Ng01-223H05.b	B6Ng01-223H05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(28,538,249 - 28,539,435)	(28,487,655 - 28,488,752)
sequence	gaattcctttagaatagtaataatattgtcttataaaaccagttgataca atttgcatactgaatgaagaaatgttatacaacaaactcatagcagtcaa ttaatacacaggctagttacatgtctcatcagcctacaagaatttctgaa tagaagcctaagtgaggtaaggtgctgtaactttttgaatctaaatactg acttttaaccagtaccagtgatgagtccattcttttcagatggaaagtta taactgttaaactgtatccaatatttgctgtaaagcactaataattgcta cattaactaaccctcaagaaaggaaaatatttgcaacaatatgaaagtat caaccactaagcaggttaaatgccaccttccatgtctgaaggaaaagtac aaaataaccatgaagatgaatgaagtttattggcgactgtcaggctgtgg tggcaaagagggacccatcacaaccagagtcggcatgtccattgtgctgt gacataattgtattcctgcctggttgtgatagctatcaagcaagaaattt actacaagattaacagagacacagtaatgaaaaacatggagcatgctgta attggctgttattaaagggtagtcatagtggtttgtaacaaactcccttg ctgcagacttgtggacaaatccaaacgagaattttcggatactttccttc cttccgtttcaaagttgtggtgtggatacctcctaccctgtttcgccttg ctcacttcacaagccagtggctaggagaagcctaagggggtggggtagat acggcatgtgccacgtgtgatttagaggtgtaggagggcttcaaaactgc gaggtgttgggtttactttgactgtggttccccagaatagtaagggaaag atcccagatcacttttacatttctaacatgctataaaagtccccataaaa caggaagaaaactgttccagaagcatgaaccgggttttctaactgacaca gcagtggtgatggcggcctgttccatttcatattttaatgaggcagtatc tcttgagacagtcatgcctgcagaggcgagttcctgagaatcacaaggag tcgcttttatgacaagtcccatccaaaactttcactgggtacaagaagac cttgattctattgactggtctcactacgatactg	gaattcagaaagctgcctctgtaacacctggagggggcagaagagaaggt tctgtcaggtgaacctgcaccaacattctctcttgaacttcttgactcac cccctccaaaaaaaaaaagataaaaaggaagaatatgggtattcaccacc tgtacagataatgagattgacctcagactattcctagagggccaccttgc aaaccaagcccaagggtgtagtctctagacttgatgtcgctttcctcctg gatgccattacagaacttccaacattgttgggcttcttaacacctcaaga aatgatctgatcggtacagtgacgggtgcggaaggaagatccacccagaa tccaattctgtgggcattgtgtacgtctgtttggcttcggtgttagcttt cagaacagtgggccctgtttggcctccccagattccacatttggccatga agatcagcagtgcagcagaggaagagtgccggcaggaaaatggacagctg aaggtaatttgaggaagtcgggtttgccaaggagaaatcaagaatcctgg tagggaagagaacacagggaagcccaggtggtggcctgtctgaaggtggg tcgaaatggcaacatcagaagccgagagctgctcatctcacggatggagg cttctctgccgctggctaacttcccacccaacatccaaggcccagagtat gggcctcactcccgccaggatgcagggctggttagcccgccctgattttg ctaggggcgagatgtcgatctctggagctgcgtctctgtctctgccagcg atggacgaagacctcgttctcgctgctttcctttatctcttggagttagc acatcacctaaaaacagggaggacagtgcgggaaggtagaaagggttgag aagtcatcttcccggagcttcgtctccagaactgggaaaacaaaacaaaa agcccgcgaggcttggatgcaaaccagtcatcggtattctgcggcagcgg cagcggctttccaattgcaaccctcttcagtagttactaggtccacttat gtgacgcgcttttcctttgtgactcgtaggcctctcttttgtcccctcta gcct
quality values	Open. Hide. 58 29 22 31 58 58 58 58 62 47 62 62 54 38 33 47 47 62 62 62 62 62 62 62 62 49 62 49 62 62 62 49 35 35 32 28 27 28 27 44 44 45 32 34 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 51 59 50 48 54 50 56 62 56 54 42 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 52 62 62 62 62 62 62 62 62 62 54 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 53 54 58 58 58 58 58 54 58 58 58 58 54 47 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 52 58 58 54 58 58 58 58 54 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 46 41 58 58 51 49 58 58 49 58 52 51 58 37 58 58 58 58 58 50 58 54 49 58 53 52 50 53 51 58 42 50 58 51 58 50 51 52 51 51 49 58 58 58 58 58 58 51 58 58 51 58 50 50 50 40 58 24 58 58 51 52 58 58 43 46 50 58 50 52 52 49 36 51 58 49 41 58 38 58 41 39 58 58 58 53 52 50 47 30 38 49 52 58 58 52 51 52 50 50 49 50 46 31 49 41 58 58 39 41 25 58 58 45 52 54 54 40 39 44 47 53 45 54 50 33 26 30 50 52 52 51 54 38 42 36 49 42 40 54 34 54 33 35 40 45 51 49 52 53 53 42 42 38 41 53 53 45 37 52 45 54 38 47 45 37 41 24 32 44 42 53 42 24 54 51 16 54 54 21 28 33 39 40 51 12 54 54 54 54 34 53 49 49 51 31 32 32 41 32 31 35 31 53 33 39 31 47 30 45 40 52 26 32 40 45 53 31 34 31 21 52 53 32 29 53 32 34 31 45 31 43 22 41 42 24 51 35 28 18 31 31 28 40 51 30 31 28 40 29 17 45 24 45 15 19 8 32 42 51 51 34 51 36 25 30 19 48 46 43 31 32 31 42 17 42 42 21 32 36 48 48 32 26 18 30 46 32 31 30 31 46 37 17 46 12 12 47 46 13 19 15 28 46 32 22 20 25 26 27 32 25 28 48 39 28 7 26 19 11 41 31 31 27 32 36 29 16 25 43 32 25 20 19 26 41 44 27 28 32 32 48 48 32 25 31 16 44 44 25 20 20 24 31 23 33 24 33 41 41 32 24 24 23 21 26 20 14 12 10 6 32 8 33 18 13 10 15 22 9 10 28 36 14 5 43 43 31 18 16 9 9 30 6 10 34 21 13 14 11 18 22 8 5 4 4 12 4 6 9 16 12 18 10 4 4 9 9 22 32 10 20 11 13 23 20 28 21 8 6 5 6 21 47 40 27 13 19 16 18 12 5 21 17 5 7 5 7 12 5 8 7 7 17 13 9 4 9 9 20 20 21 3 3 3 11 6 15 9 14 18 6 4 21 17 13 13 9 17 12 6 13 16 11 20 6 3 2 6 10 5 4 6 6 13 10 3 6 4 4 6 4 4 9 9 28 25 6 6 21 12 12 10 5 17 5 13 7 30 13 11 17 6 6 11 23 30 13 13 4 27 8 7 7 5 4 5 6 5 4 1 2 3 4 6 12 3 2 3 7 4 4 6 2 1 1 2 5 3 1 1 3 3 1 3 8 4 3 1 1 11 6 7 4 12 10 6 4 6 16 4 2 1 3	Open. Hide. 62 47 32 33 62 39 26 38 62 62 56 62 25 26 24 21 25 25 22 27 28 19 24 24 27 34 41 62 62 62 56 35 59 62 62 62 62 62 62 59 54 62 59 62 59 62 62 54 54 62 62 62 62 62 59 59 49 27 48 34 30 30 45 49 51 48 43 28 43 51 46 54 62 62 59 62 62 59 59 59 59 62 59 62 62 54 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 46 56 59 59 59 62 59 59 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 56 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 62 62 59 62 59 62 62 62 62 62 62 62 62 56 59 62 62 62 62 62 62 62 59 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 56 56 39 56 50 62 56 56 62 62 62 62 62 62 62 56 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 56 56 54 62 62 62 54 56 62 62 62 62 62 62 62 56 62 56 62 62 62 62 62 47 38 62 62 56 62 56 47 47 62 62 56 56 56 56 47 62 42 62 62 62 43 62 56 56 62 62 62 62 62 62 54 54 62 62 62 62 47 42 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 58 54 58 58 58 52 54 54 52 58 58 52 58 58 54 54 45 48 52 52 58 45 39 58 47 41 47 54 52 48 48 58 38 42 54 58 22 37 19 10 19 24 58 52 58 58 52 58 24 58 41 39 53 53 52 52 39 36 58 58 42 47 52 52 52 34 52 41 45 42 41 58 42 43 58 51 58 49 50 49 58 58 42 41 58 34 58 58 58 46 58 49 58 58 51 49 58 54 50 50 51 51 27 45 58 50 47 58 54 35 50 48 42 58 46 49 50 50 53 51 51 53 53 22 54 50 53 49 50 39 40 49 53 33 51 54 48 32 41 35 51 41 39 41 53 49 51 32 54 43 50 50 42 43 33 50 32 35 39 51 51 50 47 43 23 43 50 43 26 51 39 40 49 39 35 20 29 42 58 16 51 46 30 25 39 21 39 39 32 50 54 47 49 42 37 53 39 42 43 53 54 49 27 41 52 31 53 52 34 27 50 31 9 7 33 28 29 35 31 39 25 17 15 20 23 54 53 41 27 54 45 40 38 31 29 34 54 40 33 32 39 24 40 51 46 46 36 33 47 19 33 29 33 23 53 24 28 28 31 26 34 32 42 46 37 21 32 52 37 45 29 53 36 36 34 28 31 32 23 33 34 34 33 17 27 29 25 34 19 41 28 45 29 39 21 19 51 31 20 32 22 51 31 45 32 33 31 51 29 31 31 43 36 43 28 26 47 27 31 36 26 46 7 12 29 34 31 42 41 30 46 26 43 21 26 33 26 31 32 32 43 31 31 31 15 13 32 31 19 46 37 46 6 9 24 22 31 10 20 9 17 31 29 26 26 22 41 27 16 29 26 19 22 11 31 15 32 17 16 46 11 15 41 16 25 11 25 39 14 46 41 10 21 26 21 37 31 14 25 27 44 23 8 5 29 9 31 28 36 38 13 31 21 15 20 38 18 24 30 35 26 31 26 41 31 21 43 44 32 20 16 23 25 13 12 14 21 16 25 17 14 30 36 15 9 8 6 14 12 24 12 22 11 31 18 14 15 21 24 12 30 9 28 18 14 8 4 4 16 20 11 14 12 10 24 24 11 7 16 16 28 10 21 11 4 4 15 18 4 11 27 7 12 9 27 14 18 28 21 7 9 14 6 11 10 28 20 19 28 16 34 11 13 10 9 15 8 11 9 5 8 10 28 12 20 10 8 31 7 15 4 4 9 15 9 18 8 13 16 16 6 4 2 6 7 13 3 8 12 26 26 6 3 3 3 9 7 11 7 12 15 22 7 14 16 7 21 9 20 11 14 4 10 11 12 15 23 7 12 11 4 11 21 24 8 18 4 6 4 4 6 12 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_28538249_28539435
seq2: B6Ng01-223H05.b_43_1226 (reverse)

seq1  CAGTA-CGTAGTGAGACAAGTGGAATAAGAACCAAGTCTTTCTTTGTACA  49
      ||||| ||||||||||| |||  ||| |||| ||||   ||| |||||| 
seq2  CAGTATCGTAGTGAGACCAGT-CAAT-AGAATCAAGGTCTTC-TTGTACC  47

seq1  CAGTGAAGGTTTTGAATGGGACTTGTCAATAAAGCGACTCCCTTTGTGAT  99
      ||||||| |||||| |||||||||||||  |||||||||||  |||||||
seq2  CAGTGAAAGTTTTGGATGGGACTTGTCATAAAAGCGACTCC--TTGTGAT  95

seq1  CTTCCAGGAACCTCGCCTCTGCAGGCAAGGACTGTCTC-AGAGATACTGG  148
       |  |||||| ||||||||||||||| | ||||||||| ||||||||| |
seq2  -TCTCAGGAA-CTCGCCTCTGCAGGC-ATGACTGTCTCAAGAGATACT-G  141

seq1  CCTCATTAAAATATG-AATGGAACAGGCCGCCATCACCACTGCTGTGTC-  196
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  CCTCATTAAAATATGAAATGGAACAGGCCGCCATCACCACTGCTGTGTCA  191

seq1  GGTAGAAAACCC-GTTCATGC-TCTGGAACAGTTTTCTTCCTGTTTTATG  244
      | |||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  GTTAGAAAACCCGGTTCATGCTTCTGGAACAGTTTTCTTCCTGTTTTATG  241

seq1  GGGACTTTTATAGCATGTTAGAAATGTAAAAGTGATCTGGGATCTTTTCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGGACTTTTATAGCATGTTAGAAATGTAAAAGTGATCTGGGATCTTTCCC  291

seq1  TTACTATTCTGGGGAACCACAGTCAAAGTAAACCCAACACCTCGCAGTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTCTGGGGAACCACAGTCAAAGTAAACCCAACACCTCGCAGTTT  341

seq1  TGAAGCCCTCCTACACCTCTAAATCACACGTGGCACATGCCGTATCTACC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCCTCCTACACCTCTAAATCACACGTGGCACATGCCGTATCTACC  391

seq1  CCACCCCCTTAGGCTTCTCCTAGCCACTGGCTTGTGAAGTGAGCAAGGCG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCTTAGGCTTCTCCTAGCCACTGGCTTGTGAAGTGAGCAAGGCG  441

seq1  AAACAGGGTAGGAGGTATCCACACCACAACTTTGAAACGGAAGGAAGGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGGTAGGAGGTATCCACACCACAACTTTGAAACGGAAGGAAGGAA  491

seq1  AGTATCCGAAAATTCTCGTTTGGATTTGTCCACAAGTCTGCAGCAAGGGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCGAAAATTCTCGTTTGGATTTGTCCACAAGTCTGCAGCAAGGGA  541

seq1  GTTTGTTACAAACCACTATGACTACCCTTTAATAACAGCCAATTACAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTACAAACCACTATGACTACCCTTTAATAACAGCCAATTACAGCA  591

seq1  TGCTCCATGTTTTTCATTACTGTGTCTCTGTTAATCTTGTAGTAAATTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATGTTTTTCATTACTGTGTCTCTGTTAATCTTGTAGTAAATTTC  641

seq1  TTGCTTGATAGCTATCACAACCAGGCAGGAATACAATTATGTCACAGCAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGATAGCTATCACAACCAGGCAGGAATACAATTATGTCACAGCAC  691

seq1  AATGGACATGCCGACTCTGGTTGTGATGGGTCCCTCTTTGCCACCACAGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACATGCCGACTCTGGTTGTGATGGGTCCCTCTTTGCCACCACAGC  741

seq1  CTGACAGTCGCCAATAAACTTCATTCATCTTCATGGTTATTTTGTACTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTCGCCAATAAACTTCATTCATCTTCATGGTTATTTTGTACTTT  791

seq1  TCCTTCAGACATGGAAGGTGGCATTTAACCTGCTTAGTGGTTGATACTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGACATGGAAGGTGGCATTTAACCTGCTTAGTGGTTGATACTTT  841

seq1  CATATTGTTGCAAATATTTTCCTTTCTTGAGGGTTAGTTAATGTAGCAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTTGCAAATATTTTCCTTTCTTGAGGGTTAGTTAATGTAGCAAT  891

seq1  TATTAGTGCTTTACAGCAAATATTGGATACAGTTTAACAGTTATAACTTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTGCTTTACAGCAAATATTGGATACAGTTTAACAGTTATAACTTT  941

seq1  CCATCTGAAAAGAATGGACTCATCACTGGTACTGGTTAAAAGTCAGTATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGAAAAGAATGGACTCATCACTGGTACTGGTTAAAAGTCAGTATT  991

seq1  TAGATTCAAAAAGTTACAGCACCTTACCTCACTTAGGCTTCTATTCAGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCAAAAAGTTACAGCACCTTACCTCACTTAGGCTTCTATTCAGAA  1041

seq1  ATTCTTGTAGGCTGATGAGACATGTAACTAGCCTGTGTATTAATTGACTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTAGGCTGATGAGACATGTAACTAGCCTGTGTATTAATTGACTG  1091

seq1  CTATGAGTTTGTTGTATAACATTTCTTCATTCAGTATGCAAATTGTATCA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTTGTTGTATAACATTTCTTCATTCAGTATGCAAATTGTATCA  1141

seq1  ACTGGTTTTATAAGACAATATTATTACTATTCTAAAGGAATTC  1187
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTTTATAAGACAATATTATTACTATTCTAAAGGAATTC  1184

seq1: chr5_28487655_28488752
seq2: B6Ng01-223H05.g_66_1169

seq1  GAATTCAGAAAGCTGCCTCTGTAACACCTGGAGGGGGCAGAAGAGAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGCTGCCTCTGTAACACCTGGAGGGGGCAGAAGAGAAGGT  50

seq1  TCTGTCAGGTGAACCTGCACCAACATTCTCTCTTGAACTTCTTGACTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGTGAACCTGCACCAACATTCTCTCTTGAACTTCTTGACTCAC  100

seq1  CCCCTCCAAAAAAAAAAAGATAAAAAGGAAGAATATGGGTATTCACCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCAAAAAAAAAAAGATAAAAAGGAAGAATATGGGTATTCACCACC  150

seq1  TGTACAGATAATGAGATTGACCTCAGACTATTCCTAGAGGGCCACCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGATAATGAGATTGACCTCAGACTATTCCTAGAGGGCCACCTTGC  200

seq1  AAACCAAGCCCAAGGGTGTAGTCTCTAGACTTGATGTCGCTTTCCTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGCCCAAGGGTGTAGTCTCTAGACTTGATGTCGCTTTCCTCCTG  250

seq1  GATGCCATTACAGAACTTCCAACATTGTTGGGCTTCTTAACACCTCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCATTACAGAACTTCCAACATTGTTGGGCTTCTTAACACCTCAAGA  300

seq1  AATGATCTGATCGGTACAGTGACGGGTGCGGAAGGAAGATCCACCCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTGATCGGTACAGTGACGGGTGCGGAAGGAAGATCCACCCAGAA  350

seq1  TCCAATTCTGTGGGCATTGTGTACGTCTGTTTGGCTTCGGTGTTAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCTGTGGGCATTGTGTACGTCTGTTTGGCTTCGGTGTTAGCTTT  400

seq1  CAGAACAGTGGGCCCTGTTTGGCCTCCCCAGATTCCACATTTGGCCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTGGGCCCTGTTTGGCCTCCCCAGATTCCACATTTGGCCATGA  450

seq1  AGATCAGCAGTGCAGCAGAGGAAGAGTGCCGGCAGGAAAATGGACAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGCAGTGCAGCAGAGGAAGAGTGCCGGCAGGAAAATGGACAGCTG  500

seq1  AAGGTAATTTGAGGAAGTCGGGTTTGCCAAGGAGAAATCAAGAATCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATTTGAGGAAGTCGGGTTTGCCAAGGAGAAATCAAGAATCCTGG  550

seq1  TAGGGAAGAGAACACAGGGAAGCCCAGGTGGTGGCCTGTCTGAAGGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAGAGAACACAGGGAAGCCCAGGTGGTGGCCTGTCTGAAGGTGGG  600

seq1  TCGAAATGGCAACATCAGAAGCCGAGAGCTGCTCATCTCACGGATGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAATGGCAACATCAGAAGCCGAGAGCTGCTCATCTCACGGATGGAGG  650

seq1  CTTCTCTGCCGCTGGCTAACTTCCCACCCAACATCCAAGGCCCAGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGCCGCTGGCTAACTTCCCACCCAACATCCAAGGCCCAGAGTAT  700

seq1  GGGCCTCACTCCCGCCAGGATGCAGGGCTGGTTAGCCCGCCCTGATTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCACTCCCGCCAGGATGCAGGGCTGGTTAGCCCGCCCTGATTTTG  750

seq1  CTAGGGGCGAGATGTCGATCTCTGGAGCTGCGTCTCTGTCTCTGCCAGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGCGAGATGTCGATCTCTGGAGCTGCGTCTCTGTCTCTGCCAGCG  800

seq1  ATGGACGAAGACCTCGTTCTCGCTGCTTTCC-TTATCTCTTGGAGTTAGC  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGGACGAAGACCTCGTTCTCGCTGCTTTCCTTTATCTCTTGGAGTTAGC  850

seq1  ACATCACCT-AAAACAGGGAGGACAGTGCGGGAAGGTAG-AAGGGTTGAG  897
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  ACATCACCTAAAAACAGGGAGGACAGTGCGGGAAGGTAGAAAGGGTTGAG  900

seq1  AAAGTCATCTTCCCGGAGCTTCGTCTCCAGAACTGGGAAAACAAAACAAA  947
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAGTCATCTTCCCGGAGCTTCGTCTCCAGAACTGGGAAAACAAAACAAA  949

seq1  AAGCCCGCGAGGC-TGGATGC-AACCAGGCATCGGTA-TCTGCGGCAGCG  994
      ||||||||||||| ||||||| |||||| |||||||| ||||||||||||
seq2  AAGCCCGCGAGGCTTGGATGCAAACCAGTCATCGGTATTCTGCGGCAGCG  999

seq1  GCAGCGGCTTT-CAATTGCAACCCTCTTCAG-AGTTACTAAGTCCACTTA  1042
      ||||||||||| ||||||||||||||||||| |||||||| |||||||||
seq2  GCAGCGGCTTTCCAATTGCAACCCTCTTCAGTAGTTACTAGGTCCACTTA  1049

seq1  TGTGGACGCCGCTTTCCCCTTTGTGACCTCGGAGGCCTCTC-TTTGT--C  1089
      ||| |||| ||||||  ||||||||| |||| ||||||||| |||||  |
seq2  TGT-GACG-CGCTTT-TCCTTTGTGA-CTCGTAGGCCTCTCTTTTGTCCC  1095

seq1  CTCTAGCTT  1098
      ||||||| |
seq2  CTCTAGCCT  1104

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BAC

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Alignment Information