BAC Information

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BAC

Clone NameB6Ng01-225D08
Chromosome5 (Build37)
Map Location 113,582,605 - 113,583,104
singlet/doubletsinglet
Overlap gene2900026A02Rik
Upstream geneA230057G18Rik, Cryba4, Crybb1, Tpst2, Tfip11, 2810002G02Rik, Hps4, EG625424, Asphd2, Sez6l, EG625464, Myo18b, Adrbk2, Crybb2, LOC100042920, Crybb3
Downstream geneGm854, Rutbc2, Aym1, C530024P05Rik, Cmklr1, LOC381707, D5Ertd40e, Sart3, LOC100041786, Iscu, Tmem119, Selplg, Coro1c, Ssh1, Dao1, Svop, Usp30, Alkbh2, Ung
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225D08.bB6Ng01-225D08.g
ACCGA039461GA039462
length644495
definitionB6Ng01-225D08.b B6Ng01-225D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcatctctttctgtttctgtgaagaatgaggtggggatttt
gattgtgggttgcaccacctctgtaaatttctcttaagggagttctcatc
ttcacagtattctttctctaatccatgagtacagaagggctttctgtctt
cctgtctccatcagtctttcttcagaggtgtaaaggcttttactgtggag
gtccttcacctattcagttaggtttattcctggctgccttaccttctttg
tggctgtcgtgaactgagggtgtctgtgatctctctcagcatcgtcgtcg
ttgaccggaaagagcactgtttctgtgagttcgctttgcctcctgccatg
ttgctggagtgttggtcatttctagttttgtggtagcttcttttgcatac
agtatcgtgtcatctgcagataaaagtagtttggcttcttcaggttgtgt
ccttttaatatttccactttgtctcagctactgcattaaaaaaacacact
gaaaaggagtggggagagcagacagtgctcttcctgactttaatggggtt
gctttgagttctccacttaagactatgctgactgcaggtttgtcacacag
aatctttattatgttgttatgtcccctttccttcccctccccct
atcagtcagctttgtttagcactcacgagaccaagacacaccttcagagc
taagatcaagtcaacatggtggccgcccggcgcaaactccaaggccgggc
atcctaggtcaaattgctttccactgctgatggctaggtgactctccaga
ggtggcttaacctctctgggcagatgatagcagtctctctctccaggact
actcaaaggacaaaatgaacctctgacaccccaaccacccaccataccac
accacaccacaccccccccccacccccccgtcacagaactcagaatgtga
ctaaatttttgaagagccttaaaaccactgggtaagctaaaggaggccag
tagggtgggtcttccgattcaagtatctttgaggctgggggtgagtgctc
atgtagttcgatgcgactgcctctgcttcacaagtgctgggatcatggag
gctctgcaactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_113582605_113583104
seq2: B6Ng01-225D08.g_66_566

seq1  GAATTCATCAGTCAGCTTTGTTTAGCACTCACGAGACCAAGACACACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGTCAGCTTTGTTTAGCACTCACGAGACCAAGACACACCTT  50

seq1  CAGAGCTAAGATCAAGTCAACATGGTGGCCGCCCGGCGCAAACTCCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTAAGATCAAGTCAACATGGTGGCCGCCCGGCGCAAACTCCAAGG  100

seq1  CCGGGCATCCTAGGTCAAATTGCTTTCCACTGCTGATGGCTAGGTGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCATCCTAGGTCAAATTGCTTTCCACTGCTGATGGCTAGGTGACTC  150

seq1  TCCAGAGGTGGCTTAACCTCTCTGGGCAGATGATAGCAGTCTCTCTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGTGGCTTAACCTCTCTGGGCAGATGATAGCAGTCTCTCTCTCC  200

seq1  AGGACTACTCAAAGGACAAAATGAACCTCTGACACCCCAACCACCCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTACTCAAAGGACAAAATGAACCTCTGACACCCCAACCACCCACCA  250

seq1  TACCACACCACACCACACCCCCCCCCC-CCCCCCCGTCACAGAACTCAGA  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACCACACCACACCACACCCCCCCCCCACCCCCCCGTCACAGAACTCAGA  300

seq1  ATGTGACTAAATTTTTGAAGAGCCTTAAAACCACTGGGTAAGCTAAAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTAAATTTTTGAAGAGCCTTAAAACCACTGGGTAAGCTAAAGGA  350

seq1  GGCCAGTAGGGTGGGTCTTCCGATTCAAGTATCTTTGAGGCTGGGGGTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTAGGGTGGGTCTTCCGATTCAAGTATCTTTGAGGCTGGGGGTGA  400

seq1  GTGCTCATGTAGTTCGATGCGACTGCCTCTGCTTCACAAGTGCTGGGATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATGTAGTTCGATGCGACTGCCTCTGCTTCACAAGTGCTGGGATC  450

seq1  ATGGAGGCTCTGCAACTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCTCTGCAACTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  500

seq1  G  500
      |
seq2  G  501