BAC Information

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BAC

Clone NameB6Ng01-225E14
Chromosome5 (Build37)
Map Location 56,332,327 - 56,333,539
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream geneLOC100041335
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225E14.bB6Ng01-225E14.g
ACCGA039521GA039522
length1,1961,043
definitionB6Ng01-225E14.b B6Ng01-225E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccctctgagatggattttcttagcaggtttgaaaaaatgatc
aaggccaattcttcgatgatacttcatgaaataaaataaataaaataaat
aaaataaaaagtagaatgattatctcagagaagaataatatatgtcctaa
taaattaggaaaattgatagtccgtggcttgtcagtaacaactataagtc
agtagaaaaagaaatggagagagctgtagaagaagcagagggccagcaat
cagaatatacttttatgtaaaaaacaaaattggtttccaattaaagggaa
aaataaaagaaaaaaaaaacagggagaccattaaaagttttattagaatg
tacatgtattaagatgttataaatcttattaaaaattaagattcagatat
tgccataacctagggggaaagctgatagaaattacacagacatacaatgt
tagaattagaatagtttacatttttttaaagaagaactgaaacgagacat
cattgtgcattcagagataaatacgtttggcagagcttccacaataaagc
aggtggggaaagagtttggaacagaaggccagtgtagtgaagcagtgtaa
taggacaggggatctatgatcatgaaggagtacttggcagtgagaaaacc
agatttaagtactaatgatgaaagacataacaaagaggcactcaaaagaa
gagagggacaaagtcaaaatgatttccttgccaactacatctgccatctg
ttaatatgacagtgtttcataaagaaaacttgttcataaacataaattag
ttagcttgagaaaaatacagcctatgacatttgacaaaacacagataatt
gaatttctgtcaatttttaaatcaactagatttatccaatgttttgagta
tgcagatattcataaaacacagaggagtacttgtaggaaacatgctactt
ttctaatgctttaaagtgcggtgacagtgtaattcttactaaaaatattt
tattctctgtccaaaatgaaaatggagtttgtgaagtaatgtctattcga
cttgggttagaattgctcaagtcacttgctatcctcatatgaagtattta
ttacaatatagaagttatcattaaaggaaatgtttactaaagaatatact
gagttcaggcactcgaagcaaggcagccgatttcttggagttcgag

gaattctttgatgcctaaccttaatgaaatgatattcacaaaacttgaaa
agaccccaggcaatttttcgtagcattctgtacattttcttaagtttcat
tttacaaaactcataaaatcccaatgacagagcagatggacccatgaaat
attatctatcctaaacatggcataaaaaaatgaaaacacaggttgatatt
gcctatctcatcacagaaatcttacaaagctccatccctaggtaccccta
agtaaagtgttgcatgaagttcatggcttttgagacagggaaaataaatc
tgctacataaagcaatcttctgacaagtcatataacccaaaatggtcagc
cctaaactaacagatatatgaccaattttaaaaagactcagaagactata
tttactcttatatatgtaagtgtacatgtgtgcagatgtatgtatgtgtg
tgtgtgtatatatatatatatatatatatatatatacacacacatacata
cacacacacacacacacacatatatatatatatatatatatatatgtgtg
tgtgtgtgtgtgtgtatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtatgtctctctagaggagagatatatatatgtattatattttttctct
ctctctctctctctgtgtcacacgacacacacctcatgtgtatatataga
gagagagagatgtgtgtggtgtgaggagagagagagacacacactgtgtg
tgtgtgtgtgtgtgtgtgtatgtgtagagatagataaataggatacatac
acgcgctcacacagagactgtgagtgtgtgtgtgtgagacacacaaaaat
acatagagagacacacacaaataacatgcgcgcgcgcgcggtgtggtgtg
tgtctttctttaatgtgagagagcaaagaaaagaaggaggcgcgtctgta
gtttctcctaatatatacgacaggcggccggcggcgcggccgaccgatca
ctctgatcggtgatgaatgaatttatattatataagaatttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56332327_56333539
seq2: B6Ng01-225E14.b_45_1240 (reverse)

seq1  CTCGAACTC--AGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGACATC  48
      |||||||||  |||||| || |||||| ||| |  |||||||  ||  ||
seq2  CTCGAACTCCAAGAAAT-CGGCTGCCT-TGCTT--CGAGTGCCTGAACTC  46

seq1  AGTATATCTTTTAGTAAAACATTTCCTTTTATTGATTAAACTTTCTATAT  98
      |||||||  |||||| |||||||||| |||| ||||  ||| ||||||||
seq2  AGTATATTCTTTAGT-AAACATTTCC-TTTAATGAT--AAC-TTCTATAT  91

seq1  GTTAATAAAATACTTCATTAATGAGGATAAGCAAGTGACTTTGAGGCAAT  148
        |||| |||||||||||  |||||||| |||||||||| |||| |||| 
seq2  TGTAAT-AAATACTTCAT--ATGAGGAT-AGCAAGTGAC-TTGA-GCAA-  134

seq1  TTCTAACCCAAGTCGAATAGACATTACCTTCACAAACCTCCATTTTCATT  198
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  TTCTAACCCAAGTCGAATAGACATTA-CTTCACAAA-CTCCATTTTCATT  182

seq1  TTGGACAGAGAATAAAATATTTTTTAGTAAGAATTACACTGTCACCGCAC  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGGACAGAGAATAAAATA-TTTTTAGTAAGAATTACACTGTCACCGCAC  231

seq1  TTTAAAGCATTAGAAAAGTAGCATGTTTCCTACAAGTACTCCTCTGTGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCATTAGAAAAGTAGCATGTTTCCTACAAGTACTCCTCTGTGTT  281

seq1  TTATGAATATCTGCATACTCAAAACATTGGATAAATCTAGTTGATTTAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATATCTGCATACTCAAAACATTGGATAAATCTAGTTGATTTAAA  331

seq1  AATTGACAGAAATTCAATTATCTGTGTTTTGTCAAATGTCATAGGCTGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACAGAAATTCAATTATCTGTGTTTTGTCAAATGTCATAGGCTGTA  381

seq1  TTTTTCTCAAGCTAACTAATTTATGTTTATGAACAAGTTTTCTTTATGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAAGCTAACTAATTTATGTTTATGAACAAGTTTTCTTTATGAA  431

seq1  ACACTGTCATATTAACAGATGGCAGATGTAGTTGGCAAGGAAATCATTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTCATATTAACAGATGGCAGATGTAGTTGGCAAGGAAATCATTTT  481

seq1  GACTTTGTCCCTCTCTTCTTTTGAGTGCCTCTTTGTTATGTCTTTCATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGTCCCTCTCTTCTTTTGAGTGCCTCTTTGTTATGTCTTTCATCA  531

seq1  TTAGTACTTAAATCTGGTTTTCTCACTGCCAAGTACTCCTTCATGATCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTTAAATCTGGTTTTCTCACTGCCAAGTACTCCTTCATGATCAT  581

seq1  AGATCCCCTGTCCTATTACACTGCTTCACTACACTGGCCTTCTGTTCCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCCTGTCCTATTACACTGCTTCACTACACTGGCCTTCTGTTCCAA  631

seq1  ACTCTTTCCCCACCTGCTTTATTGTGGAAGCTCTGCCAAACGTATTTATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCCCACCTGCTTTATTGTGGAAGCTCTGCCAAACGTATTTATC  681

seq1  TCTGAATGCACAATGATGTCTCGTTTCAGTTCTTCTTTAAAAAAATGTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGCACAATGATGTCTCGTTTCAGTTCTTCTTTAAAAAAATGTAA  731

seq1  ACTATTCTAATTCTAACATTGTATGTCTGTGTAATTTCTATCAGCTTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTAATTCTAACATTGTATGTCTGTGTAATTTCTATCAGCTTTCC  781

seq1  CCCTAGGTTATGGCAATATCTGAATCTTAATTTTTAATAAGATTTATAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGTTATGGCAATATCTGAATCTTAATTTTTAATAAGATTTATAAC  831

seq1  ATCTTAATACATGTACATTCTAATAAAACTTTTAATGGTCTCCCTGTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATACATGTACATTCTAATAAAACTTTTAATGGTCTCCCTGTTTT  881

seq1  TTTTTTCTTTTATTTTTCCCTTTAATTGGAAACCAATTTTGTTTTTTACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTATTTTTCCCTTTAATTGGAAACCAATTTTGTTTTTTACA  931

seq1  TAAAAGTATATTCTGATTGCTGGCCCTCTGCTTCTTCTACAGCTCTCTCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATATTCTGATTGCTGGCCCTCTGCTTCTTCTACAGCTCTCTCC  981

seq1  ATTTCTTTTTCTACTGACTTATAGTTGTTACTGACAAGCCACGGACTATC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTTCTACTGACTTATAGTTGTTACTGACAAGCCACGGACTATC  1031

seq1  AATTTTCCTAATTTATTAGGACATATATTATTCTTCTCTGAGATAATCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCTAATTTATTAGGACATATATTATTCTTCTCTGAGATAATCAT  1081

seq1  TCTACTTTTTATTTTATTTATTTTATTTATTTTATTTCATGAAGTATCAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTTTTATTTTATTTATTTTATTTATTTTATTTCATGAAGTATCAT  1131

seq1  CGAAGAATTGGCCTTGATCATTTTTTCAAACCTGCTAAGAAAATCCATCT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAATTGGCCTTGATCATTTTTTCAAACCTGCTAAGAAAATCCATCT  1181

seq1  CAGAGGGATGAATTC  1213
      |||||||||||||||
seq2  CAGAGGGATGAATTC  1196


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