BAC Information

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BAC

Clone NameB6Ng01-228O11
Chromosome5 (Build37)
Map Location 68,861,058 - 68,862,016
singlet/doubletsinglet
Overlap genenone
Upstream geneC330024D21Rik, D830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977, AY616753
Downstream geneLOC666996, Kctd8, LOC545756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228O11.bB6Ng01-228O11.g
ACCGA042194GA042195
length101971
definitionB6Ng01-228O11.b B6Ng01-228O11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttctgacaaatggagattccccacagatacttaaaataacagccaatgtc
ttcatatgcaagaatttaccaaggcctaggaaatgggggggggggggtgg
c
gaattcctggaaaaagaaaaattcaaagaaaatcagtgtcaaaaaaagaa
agaaaaaggcaatgatgcctctgttgtgtctgttagcaataagcaacacg
ctcatttcccattctgcagtagtgtggctgtattgtagtgacacatggct
ggttgtggtgatgcacatggacaggatatgctacagaggtagggcagagg
catcacaagaatgtcacatagactcagcactaattttatttggtaagatt
tgccaaaccaaagtggggttgtttagtttccactctttctttcatgaaga
tctctgaagaaaactaaccctgaagtagtctgaatgaagacggtatgatt
acatttatttccagggatgctttctgtttaaatatgtgctgaggtttctt
atctgaagcaaatcgcaccactcgagacatgatgaaatacaatatctgtg
gataattccagatggaaaggcagaactggtagcaaagtgtgaagatggat
tccccctgcttatcagaagaccttgaaatcaggcctcacagagccagctg
gctgacagcctgttacccaaggaaaatgtccaaatggcaccattatctgc
taggtcagtctaaaattctagccactttttgaaattaatagagcatgaag
aatggttgacaaaatctgcaataagaaaattatttttttggccataagta
ataaaagaaataatctgaatttccctgctctatcctgactacttaatgga
agttaaaggaacaaaggccttgagaattgggagctgagttgcttcttctt
ctgaataattttgtctagtgaaacaaaatgcctttatgtcttcaaaacat
gtccattatttttatatttattcttgtgattaaaatgatacatattaata
ttattaaatttctttgtgcttgaattttgattgatttcttttgtgttatg
aatccccattctggactggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_68861058_68862016
seq2: B6Ng01-228O11.g_70_1040

seq1  GAATTCCTGGAAAAAGAAAAATTCAAAGAAAATCAGTGTCAAAAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAAAAGAAAAATTCAAAGAAAATCAGTGTCAAAAAAAGAA  50

seq1  AGAAAAAGGCAATGATGCCTCTGTTGTGTCTGTTAGCAATAAGCAACACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGGCAATGATGCCTCTGTTGTGTCTGTTAGCAATAAGCAACACG  100

seq1  CTCATTTCCCATTCTGCAGTAGTGTGGCTGTATTGTAGTGACACATGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCCCATTCTGCAGTAGTGTGGCTGTATTGTAGTGACACATGGCT  150

seq1  GGTTGTGGTGATGCACATGGACAGGATATGCTACAGAGGTAGGGCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGGTGATGCACATGGACAGGATATGCTACAGAGGTAGGGCAGAGG  200

seq1  CATCACAAGAATGTCACATAGACTCAGCACTAATTTTATTTGGTAAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAAGAATGTCACATAGACTCAGCACTAATTTTATTTGGTAAGATT  250

seq1  TGCCAAACCAAAGTGGGGTTGTTTAGTTTCCACTCTTTCTTTCATGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAACCAAAGTGGGGTTGTTTAGTTTCCACTCTTTCTTTCATGAAGA  300

seq1  TCTCTGAAGAAAACTAACCCTGAAGTAGTCTGAATGAAGACGGTATGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAGAAAACTAACCCTGAAGTAGTCTGAATGAAGACGGTATGATT  350

seq1  ACATTTATTTCCAGGGATGCTTTCTGTTTAAATATGTGCTGAGGTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTTCCAGGGATGCTTTCTGTTTAAATATGTGCTGAGGTTTCTT  400

seq1  ATCTGAAGCAAATCGCACCACTCGAGACATGATGAAATACAATATCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGCAAATCGCACCACTCGAGACATGATGAAATACAATATCTGTG  450

seq1  GATAATTCCAGATGGAAAGGCAGAACTGGTAGCAAAGTGTGAAGATGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCCAGATGGAAAGGCAGAACTGGTAGCAAAGTGTGAAGATGGAT  500

seq1  TCCCCCTGCTTATCAGAAGACCTTGAAATCAGGCCTCACAGAGCCAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTGCTTATCAGAAGACCTTGAAATCAGGCCTCACAGAGCCAGCTG  550

seq1  GCTGACAGCCTGTTACCCAAGGAAAATGTCCAAATGGCACCATTATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAGCCTGTTACCCAAGGAAAATGTCCAAATGGCACCATTATCTGC  600

seq1  TAGGTCAGTCTAAAATTCTAGCCACTTTTTGAAATTAATAGAGCATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAGTCTAAAATTCTAGCCACTTTTTGAAATTAATAGAGCATGAAG  650

seq1  AATGGTTGACAAAATCTGCAATAAGAAAA-TATTTTTTTGGCCATAAGTA  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATGGTTGACAAAATCTGCAATAAGAAAATTATTTTTTTGGCCATAAGTA  700

seq1  ATAAAAGAAATAATCTGAATTTCCCTGCTCTATCCTGACTACTTAATGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAATAATCTGAATTTCCCTGCTCTATCCTGACTACTTAATGGA  750

seq1  AGTTAAAGGAACAAAGGCC-TGAGAATTGGGAGCTGAGTTGCTTCTTC-T  797
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  AGTTAAAGGAACAAAGGCCTTGAGAATTGGGAGCTGAGTTGCTTCTTCTT  800

seq1  CTG-ATAA-TTTGTCTAGTGAAAACAAAATGCC-TTATGTCTTCAAAACA  844
      ||| |||| ||||||||||| |||||||||||| ||||||||||||||||
seq2  CTGAATAATTTTGTCTAGTG-AAACAAAATGCCTTTATGTCTTCAAAACA  849

seq1  TGTCCATTA-TTTTATA-TTATTCTTGTGA-TAAAATGATACATATTAAT  891
      ||||||||| ||||||| |||||||||||| |||||||||||||||||||
seq2  TGTCCATTATTTTTATATTTATTCTTGTGATTAAAATGATACATATTAAT  899

seq1  ATTATT-AATTTCTTTGTGCTTTGAATTTTGATTGATTTC-TTTGTGTTA  939
      |||||| ||||||||||||| ||||||||||||||||||| |||||||||
seq2  ATTATTAAATTTCTTTGTGC-TTGAATTTTGATTGATTTCTTTTGTGTTA  948

seq1  TGAATCCC--ATCT-GACTGGTT  959
      ||||||||   ||| ||||||||
seq2  TGAATCCCCATTCTGGACTGGTT  971