BAC Information

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BAC

Clone NameB6Ng01-231A19
Chromosome5 (Build37)
Map Location 118,577,084 - 118,578,217
singlet/doubletsinglet
Overlap geneFbxw8
Upstream geneTaok3, Pebp1, LOC100042313, LOC100039359, BC023744, LOC667175, Wsb2, Rfc5, Ksr2, Nos1, Fbxo21, Tesc
Downstream geneHrk, Tmem118, 2410131K14Rik, LOC665162, Thrap2, LOC100039488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231A19.bB6Ng01-231A19.g
ACCGA043753GA043754
length1291,150
definitionB6Ng01-231A19.b B6Ng01-231A19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcatgtgcaatacatggatgggatggaacaggaaggggtggagtggaaca
ggaagagatggaacaggaaggaatgggatggacgggacgggacgggacag
ggcgggaagggaagggaagggaagggata
gaattcacccgtctggagatggggtagaactcagcccttctcctacttaa
aggttgctgtgaatagactttgaaacaagaaagactgtcatgactgggcc
ggagtgcatgtctgtccctagtcaccttgtaacctgagtaatgaccagtg
catgggatctataatatcagtgagcaggtactgcttcccactgtggaatg
gctggccagcttcagctctggtgacatgagatccgcccactcaggccaag
cagcaccccaggacccctactccatgtcagaagcactctgcccctctaca
agaggtctccaggcattgccaggtgtccctggtggcaataattgctccta
gttaagaaccagtcatcactggagagttggccaagccagtcttccttagc
ccattaagacattaccaactaagtcagatctagtttgcccatgatgtctg
catccacagaaggtaacagggagtaggctcatttggaacctgtgcaccag
cccgatgaggcctctgatggatggacagggtgatctatggaggagagctg
cacagaggagcccaggggcctggtgaaggtgggcagagagagccttagag
ctggcctccctaccttcctttttctagaaaggagggaaccaggagagtga
cttgtccctggctttgaaatcagagatgtctgactgactgagggagagca
gtagctttgttgtgcttcggagcatggtgtacgtgcatgagtgtgcatgt
gcgaaggacaaggggaagagggcagaaggtcctcactcagctagactcag
gagaagtgaagagcatttgtcatcccatactagtttacaaagatgatgtg
atgtcaccccatgtctgtttcatcggttttctctaaccagtgcaaagcca
tcagttatgcgtggtgtgcagttgtctgtcaggtcatcctggcagacggg
acagcagtggagagggacttgtgggatcccgggcccacctccagacctgt
caacagttgaggacagcttggggtgacatttagtgaccttttcacttaaa
ctgcagttttaaaacagaagcctttcattcagtgcatgccaaggcatcat
tggccaggtggtgatcttcctgaatgccttcatcctaattcgggtgcctc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_118577084_118578217
seq2: B6Ng01-231A19.g_66_1215 (reverse)

seq1  GAGGCACCCG-ATTAGAATGAAGGCATTCA-GAAGATTCACACCTG--CC  46
      |||||||||| ||||| ||||||||||||| ||||||   ||||||  | 
seq2  GAGGCACCCGAATTAGGATGAAGGCATTCAGGAAGATCACCACCTGGCCA  50

seq1  ATGATGCCCTTGGCATGCACTG-ATG-AAGGC-TCTGTTTT-AAACTGCA  92
      |||||| ||||||||||||||| ||| ||||| |||||||| ||||||||
seq2  ATGATG-CCTTGGCATGCACTGAATGAAAGGCTTCTGTTTTAAAACTGCA  99

seq1  GTTT-AGTG-AAAGGTCACTTAAATGTCA-CCCAAGCTGTCCTC-ACTGT  138
      |||| |||| ||||||||| ||||||||| |||||||||||||| |||||
seq2  GTTTAAGTGAAAAGGTCAC-TAAATGTCACCCCAAGCTGTCCTCAACTGT  148

seq1  TGACAGGTCTGGA-GTGGGCCCGGGATCCCACAAGTCCCTCT-CACTGCT  186
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  TGACAGGTCTGGAGGTGGGCCCGGGATCCCACAAGTCCCTCTCCACTGCT  198

seq1  GT-CCGTCTGCCA-GATGACCTGACAGACAACTGCACACCACGCATAACT  234
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCCCGTCTGCCAGGATGACCTGACAGACAACTGCACACCACGCATAACT  248

seq1  GATGGCTTTGCACTGGTTAGAGAAAACCGATG-AACAGACATGGGGTGAC  283
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATGGCTTTGCACTGGTTAGAGAAAACCGATGAAACAGACATGGGGTGAC  298

seq1  ATCACATCATCTTTGTAAACTAGTATGGGATGACAAATGCTCTTCACTTC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCATCTTTGTAAACTAGTATGGGATGACAAATGCTCTTCACTTC  348

seq1  TCCTGAGTCTAGCTGAGTGAGGACCTTCTGCCCTCTTCCCCTTGTCCTTC  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTCTAGCTGAGTGAGGACCTTCTGCCCTCTTCCCCTTGTCCTTC  398

seq1  GCACATGCACACTCATGCACGTACACCATGCTCCGAAGCACAACAAAGCT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCACACTCATGCACGTACACCATGCTCCGAAGCACAACAAAGCT  448

seq1  ACTGCTCTCCCTCAGTCAGTCAGACATCTCTGATTTCAAAGCCAGGGACA  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTCCCTCAGTCAGTCAGACATCTCTGATTTCAAAGCCAGGGACA  498

seq1  AGTCACTCTCCTGGTTCCCTCCTTTCTAGAAAAAGGAAGGTAGGGAGGCC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCTCCTGGTTCCCTCCTTTCTAGAAAAAGGAAGGTAGGGAGGCC  548

seq1  AGCTCTAAGGCTCTCTCTGCCCACCTTCACCAGGCCCCTGGGCTCCTCTG  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAAGGCTCTCTCTGCCCACCTTCACCAGGCCCCTGGGCTCCTCTG  598

seq1  TGCAGCTCTCCTCCATAGATCACCCTGTCCATCCATCAGAGGCCTCATCG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTCCTCCATAGATCACCCTGTCCATCCATCAGAGGCCTCATCG  648

seq1  GGCTGGTGCACAGGTTCCAAATGAGCCTACTCCCTGTTACCTTCTGTGGA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGCACAGGTTCCAAATGAGCCTACTCCCTGTTACCTTCTGTGGA  698

seq1  TGCAGACATCATGGGCAAACTAGATCTGACTTAGTTGGTAATGTCTTAAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACATCATGGGCAAACTAGATCTGACTTAGTTGGTAATGTCTTAAT  748

seq1  GGGCTAAGGAAGACTGGCTTGGCCAACTCTCCAGTGATGACTGGTTCTTA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGGAAGACTGGCTTGGCCAACTCTCCAGTGATGACTGGTTCTTA  798

seq1  ACTAGGAGCAATTATTGCCACCAGGGACACCTGGCAATGCCTGGAGACCT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAGCAATTATTGCCACCAGGGACACCTGGCAATGCCTGGAGACCT  848

seq1  CTTGTAGAGGGGCAGAGTGCTTCTGACATGGAGTAGGGGTCCTGGGGTGC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGAGGGGCAGAGTGCTTCTGACATGGAGTAGGGGTCCTGGGGTGC  898

seq1  TGCTTGGCCTGAGTGGGCGGATCTCATGTCACCAGAGCTGAAGCTGGCCA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGCCTGAGTGGGCGGATCTCATGTCACCAGAGCTGAAGCTGGCCA  948

seq1  GCCATTCCACAGTGGGAAGCAGTACCTGCTCACTGATATTATAGATCCCA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCCACAGTGGGAAGCAGTACCTGCTCACTGATATTATAGATCCCA  998

seq1  TGCACTGGTCATTACTCAGGTTACAAGGTGACTAGGGACAGACATGCACT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGTCATTACTCAGGTTACAAGGTGACTAGGGACAGACATGCACT  1048

seq1  CCGGCCCAGTCATGACAGTCTTTCTTGTTTCAAAGTCTATTCACAGCAAC  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCCAGTCATGACAGTCTTTCTTGTTTCAAAGTCTATTCACAGCAAC  1098

seq1  CTTTAAGTAGGAGAAGGGCTGAGTTCTACCCCATCTCCA-ACGGGTGAAT  1132
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTTAAGTAGGAGAAGGGCTGAGTTCTACCCCATCTCCAGACGGGTGAAT  1148

seq1  TC  1134
      ||
seq2  TC  1150