MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-233B05
Chromosome	5 (Build37)
Map Location	92,361,224 - 92,510,707
singlet/doublet	doublet
Overlap gene	Rchy1, Thap6, Gm1045, Cdkl2, LOC100040574, G3bp2
Upstream gene	1110019K23Rik, Epgn, Ereg, Areg, Btc, 9130213B05Rik, EG665860, LOC665864, LOC100040506, Ppia-ps5_892.1
Downstream gene	Vdp, LOC100040605, U90926, Ppef2, Asahl, Sdad1, Cxcl9, Cxcl10, Cxcl11, LOC100040228, Art3, Nup54, Scarb2, Gm1381, D5Ertd593e, 4932413O14Rik, Shroom3, LOC623798, Ankrd56
Link	Open Mouse BAC browser

Click to get alignment info.

name	1110019K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665563 MGI:1915871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epgn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71920 MGI:1919170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ereg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13874 MGI:107508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Areg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11839 MGI:88068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12223 MGI:99439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130213B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231440 MGI:2443349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665860 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665860 MGI:3643840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 140 ESTs, 7 Proteins

name	LOC665864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 6 Proteins pseudo : _no_value

name	LOC100040506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ppia-ps5_892.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433914
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 5_892.1 pseudo : _no_value

name	Rchy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68098 MGI:1915348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381650 MGI:1922436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins

name	Gm1045 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381651 MGI:2685891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Cdkl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53886 MGI:1858227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040574 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs

name	G3bp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Vdp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56041 MGI:1929095
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040605 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1101 ESTs, 10 Proteins

name	U90926 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57425 MGI:1930915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Ppef2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19023 MGI:1342304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asahl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67111 MGI:1914361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231452 MGI:2140779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17329 MGI:1352449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15945 MGI:1352450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56066 MGI:1860203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Art3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109979 MGI:1202729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269113 MGI:1920460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scarb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12492 MGI:1196458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1381 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384198 MGI:2686227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D5Ertd593e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52331 MGI:1261768
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932413O14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320696 MGI:2444555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shroom3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27428 MGI:1351655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC623798 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 756 ESTs, 9 Proteins pseudo : _no_value

name	Ankrd56 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78088 MGI:1925338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110019K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301197 GeneID:665563 MGI:1915871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110019K23 gene transcript_id : NM_026788.1

name	Epgn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131191 GeneID:71920 MGI:1919170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial mitogen transcript_id : NM_053087.2

name	Ereg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709826 GeneID:13874 MGI:107508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epiregulin transcript_id : NM_007950.2

name	Areg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891746 GeneID:11839 MGI:88068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amphiregulin transcript_id : NM_009704.3

name	Btc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803221 GeneID:12223 MGI:99439
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betacellulin, epidermal growth factor family member transcript_id : NM_007568.3

name	9130213B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130163 GeneID:231440 MGI:2443349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130213B05 gene transcript_id : NM_145562.2

name	EG665860 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374924 GeneID:665860 MGI:3643840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 140 ESTs, 7 Proteins product : predicted gene, EG665860 transcript_id : XM_979932.1

name	LOC100040506 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254005 GeneID:100040506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040506 transcript_id : XM_001474924.1

name	Rchy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892747 GeneID:68098 MGI:1915348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger and CHY zinc finger domain containing 1 transcript_id : NM_026557.3

name	Thap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374926 GeneID:381650 MGI:1922436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins product : THAP domain containing 6 transcript_id : XM_980102.1

name	Gm1045 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374928 GeneID:381651 MGI:2685891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : gene model 1045, (NCBI) transcript_id : XM_355614.4

name	Cdkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859824 GeneID:53886 MGI:1858227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 2 (CDC2-related kinase) transcript_id : NM_177270.3

name	Cdkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393079 GeneID:53886 MGI:1858227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 2 (CDC2-related kinase) transcript_id : NM_016912.1

name	LOC100040574 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254007 GeneID:100040574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs product : hypothetical protein LOC100040574 transcript_id : XM_001475024.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248573 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_011816.3

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248574 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080796.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248567 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080794.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248578 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080797.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248569 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080795.1

name	Vdp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956095 GeneID:56041 MGI:1929095
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle docking protein transcript_id : NM_019490.1

name	LOC100040605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254013 GeneID:100040605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1101 ESTs, 10 Proteins product : similar to ribosomal protein L13 transcript_id : XM_001475096.1

name	U90926 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374929 GeneID:57425 MGI:1930915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence U90926 transcript_id : XM_888097.2

name	Ppef2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560803 GeneID:19023 MGI:1342304
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase, EF hand calcium-binding domain 2 transcript_id : NM_011148.2

name	Asahl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345314 GeneID:67111 MGI:1914361
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acylsphingosine amidohydrolase (acid ceramidase)-like transcript_id : NM_025972.2

name	Sdad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366971 GeneID:231452 MGI:2140779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SDA1 domain containing 1 transcript_id : NM_172713.2

name	Cxcl9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801703 GeneID:17329 MGI:1352449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 9 transcript_id : NM_008599.3

name	Cxcl10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946575 GeneID:15945 MGI:1352450
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 10 transcript_id : NM_021274.1

name	Cxcl11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507070 GeneID:56066 MGI:1860203
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 11 transcript_id : NM_019494.1

name	Art3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32171189 GeneID:109979 MGI:1202729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosyltransferase 3 transcript_id : NM_181728.1

name	Nup54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326535 GeneID:269113 MGI:1920460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 54 transcript_id : NM_183392.2

name	Scarb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377768 GeneID:12492 MGI:1196458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scavenger receptor class B, member 2 transcript_id : NM_007644.3

name	Gm1381 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702012 GeneID:384198 MGI:2686227
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1381, (NCBI) transcript_id : NM_001033478.1

name	D5Ertd593e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386655 GeneID:52331 MGI:1261768
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 5, ERATO Doi 593, expressed transcript_id : NM_175096.3

name	4932413O14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130351 GeneID:320696 MGI:2444555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932413O14 gene transcript_id : NM_177230.3

name	Shroom3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606394 GeneID:27428 MGI:1351655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : shroom family member 3 transcript_id : NM_015756.2

name	Shroom3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606378 GeneID:27428 MGI:1351655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : shroom family member 3 transcript_id : NM_001077595.1

name	Shroom3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606380 GeneID:27428 MGI:1351655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : shroom family member 3 transcript_id : NM_001077596.1

name	Ankrd56 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366393 GeneID:78088 MGI:1925338
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 56 transcript_id : NM_175270.3

name	1110019K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124301198 GeneID:665563 MGI:1915871
definition	codon_start : 1 product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein_id : NP_081064.1

name	Epgn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716373 CCDS:CCDS19419.1 GeneID:71920 MGI:1919170
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IDA] GO_process : GO:0000165 - MAPKKK cascade [Evidence IDA] codon_start : 1 product : epithelial mitogen protein_id : NP_444317.1

name	Ereg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679683 CCDS:CCDS19420.1 GeneID:13874 MGI:107508
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005154 - epidermal growth factor receptor binding [Evidence IDA] [Evidence ISS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence ISS]; GO:0007275 - development [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA]; GO:0007143 - female meiosis [Evidence ISS]; GO:0030216 - keratinocyte differentiation [Evidence ISS]; GO:0043616 - keratinocyte proliferation [Evidence ISS]; GO:0042700 - luteinizing hormone signaling pathway [Evidence ISS]; GO:0009299 - mRNA transcription [Evidence ISS]; GO:0050680 - negative regulation of epithelial cell proliferation [Evidence ISS]; GO:0051151 - negative regulation of smooth muscle cell differentiation [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0016478 - negative regulation of translation [Evidence ISS]; GO:0001556 - oocyte maturation [Evidence ISS]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0001550 - ovarian cumulus expansion [Evidence ISS]; GO:0030728 - ovulation [Evidence ISS]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0045740 - positive regulation of DNA replication [Evidence ISS] [Evidence IDA]; GO:0045741 - positive regulation of epidermal growth factor receptor activity [Evidence ISS]; GO:0048146 - positive regulation of fibroblast proliferation [Evidence ISS]; GO:0045089 - positive regulation of innate immune response [Evidence IMP]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence IMP]; GO:0045840 - positive regulation of mitosis [Evidence ISS] [Evidence IDA]; GO:0042327 - positive regulation of phosphorylation [Evidence ISS]; GO:0045860 - positive regulation of protein kinase activity [Evidence ISS]; GO:0048661 - positive regulation of smooth muscle cell proliferation [Evidence ISS]; GO:0048160 - primary follicle stage oogenesis (sensu Mammalia) [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : epiregulin protein_id : NP_031976.1

name	Areg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753108 CCDS:CCDS19421.1 GeneID:11839 MGI:88068
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA] codon_start : 1 product : amphiregulin preproprotein protein_id : NP_033834.1

name	Btc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680812 CCDS:CCDS19422.1 GeneID:12223 MGI:99439
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : betacellulin, epidermal growth factor family member protein_id : NP_031594.1

name	9130213B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704108 GeneID:231440 MGI:2443349
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : prostatic androgen-repressed message-1 product : RIKEN cDNA 9130213B05 protein_id : NP_663537.1

name	EG665860 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374925 GeneID:665860 MGI:3643840
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985026.1

name	LOC100040506 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254006 GeneID:100040506
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474974.1

name	Rchy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386058 CCDS:CCDS19424.1 GeneID:68098 MGI:1915348
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 363 product : androgen receptor N-terminal-interacting protein protein_id : NP_080833.1

name	Thap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374927 GeneID:381650 MGI:1922436
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to THAP domain containing 6 protein_id : XP_985196.1 transl_except : (pos:92394255..92394257,aa:OTHER) transl_except : (pos:92394276..92394278,aa:OTHER) transl_except : (pos:92394309..92394311,aa:OTHER) transl_except : (pos:92395501..92395503,aa:OTHER) transl_except : (pos:92395573..92395575,aa:OTHER) transl_except : (pos:92395600,aa:OTHER) transl_except : (pos:92398567..92398568,aa:OTHER) transl_except : (pos:92398572..92398574,aa:OTHER) transl_except : (pos:92398605..92398607,aa:OTHER) transl_except : (pos:92398611..92398613,aa:OTHER) transl_except : (pos:92398728..92398730,aa:OTHER) transl_except : (pos:92398758..92398760,aa:OTHER) transl_except : (pos:92398791..92398793,aa:OTHER) transl_except : (pos:92398812..92398814,aa:OTHER)

name	Gm1045 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38080305 GeneID:381651 MGI:2685891
definition	codon_start : 1 product : similar to Chromosome 4 open reading frame 26 protein_id : XP_355614.1

name	Cdkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859825 CCDS:CCDS19425.1 GeneID:53886 MGI:1858227
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : cyclin-dependent kinase-like 2 (CDC2-related kinase) isoform 2 protein_id : NP_796244.2

name	Cdkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393080 CCDS:CCDS19426.1 GeneID:53886 MGI:1858227
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cyclin-dependent kinase-like 2 (CDC2-related kinase) isoform 1 protein_id : NP_058608.1

name	LOC100040574 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254008 GeneID:100040574
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475074.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248570 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform b protein_id : NP_001074264.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248575 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 4; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform b protein_id : NP_001074265.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248568 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 2; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_001074263.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248579 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 5; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_001074266.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982757 CCDS:CCDS19427.1 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_035946.2

name	Vdp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956096 GeneID:56041 MGI:1929095
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IDA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transcytosis associated protein p115; vesicle docking protein, 115 kDa product : vesicle docking protein protein_id : NP_062363.1

name	LOC100040605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254014 GeneID:100040605
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475146.1

name	U90926 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82897926 GeneID:57425 MGI:1930915
definition	codon_start : 1 product : hypothetical protein LOC57425 protein_id : XP_893190.1

name	Ppef2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755140 GeneID:19023 MGI:1342304
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004722 - protein serine/threonine phosphatase activity [Evidence ISS] GO_process : GO:0050906 - detection of stimulus during sensory perception [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : serine/threonine protein phosphatase with EF-hand motifs 2 protein_id : NP_035278.1

name	Asahl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735433 CCDS:CCDS19428.1 GeneID:67111 MGI:1914361
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : N-acylethanolamine-hydrolyzing acid amidase product : N-acylsphingosine amidohydrolase (acid ceramidase)-like protein_id : NP_080248.1

name	Sdad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370042 CCDS:CCDS19429.1 GeneID:231452 MGI:2140779
definition	codon_start : 1 product : SDA1 domain containing 1 protein_id : NP_766301.1

name	Cxcl9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626107 GeneID:17329 MGI:1352449
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 note : monokine induced by gamma interferon; small inducible cytokine B subfamily (Cys-X-Cys), member 9; gamma interferon-induced monokine product : chemokine (C-X-C motif) ligand 9 protein_id : NP_032625.2

name	Cxcl10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946576 GeneID:15945 MGI:1352450
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 note : interferon activated gene 10; small inducible cytokine B subfamily (Cys-X-Cys), member 10 product : chemokine (C-X-C motif) ligand 10 protein_id : NP_067249.1

name	Cxcl11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507071 GeneID:56066 MGI:1860203
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence TAS]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : small inducible cytokine subfamily B (Cys-X-Cys), member 11 product : chemokine (C-X-C motif) ligand 11 protein_id : NP_062367.1

name	Art3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32171190 GeneID:109979 MGI:1202729
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 function : unknown note : ART3 mono(ADP-ribosyl)transferase; mono-ADP-ribosyltransferase 3; NAD(P)(+)--arginine ADP-ribosyltransferase product : ADP-ribosyltransferase 3 protein_id : NP_859417.1

name	Nup54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930543 CCDS:CCDS19430.1 GeneID:269113 MGI:1920460
definition	codon_start : 1 note : nucleoporin 54kDa product : nucleoporin 54 protein_id : NP_899248.1

name	Scarb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680878 CCDS:CCDS19431.1 GeneID:12492 MGI:1196458
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] codon_start : 1 note : CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2; LIMP II product : scavenger receptor class B, member 2 protein_id : NP_031670.1

name	Gm1381 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702013 CCDS:CCDS19432.1 GeneID:384198 MGI:2686227
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC384198 protein_id : NP_001028650.1

name	D5Ertd593e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424697 CCDS:CCDS19433.1 GeneID:52331 MGI:1261768
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : genethonin 1 protein_id : NP_780305.1

name	4932413O14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893281 CCDS:CCDS19434.1 GeneID:320696 MGI:2444555
definition	codon_start : 1 product : hypothetical protein LOC320696 protein_id : NP_796204.1

name	Shroom3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606395 GeneID:27428 MGI:1351655
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA] GO_process : GO:0007389 - pattern specification [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; shroom product : shroom isoform 1 protein_id : NP_056571.2

name	Shroom3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606379 GeneID:27428 MGI:1351655
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA] GO_process : GO:0007389 - pattern specification [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; shroom product : shroom isoform 2 protein_id : NP_001071063.1

name	Shroom3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606381 GeneID:27428 MGI:1351655
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA] GO_process : GO:0007389 - pattern specification [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; shroom product : shroom isoform 2 protein_id : NP_001071064.1

name	Ankrd56 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424924 CCDS:CCDS19435.1 GeneID:78088 MGI:1925338
definition	codon_start : 1 product : ankyrin repeat domain 56 protein_id : NP_780479.1

name	LOC665864 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254000 GeneID:665864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 6 Proteins product : similar to voltage dependent anion channel 2 pseudo : _no_value transcript_id : XR_031655.1

name	LOC100040228 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254001 GeneID:100040228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to CWF19-like 1, cell cycle control pseudo : _no_value transcript_id : XR_031703.1

name	LOC623798 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254023 GeneID:623798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 756 ESTs, 9 Proteins product : similar to 60S ribosomal protein L9 pseudo : _no_value transcript_id : XR_032331.1

clone name	MSMg01-337B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-356D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-415J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134E18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-233B05.b	B6Ng01-233B05.g
ACC	GA045237	GA045238
length	1,040	1,169
definition	B6Ng01-233B05.b	B6Ng01-233B05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(92,361,224 - 92,362,344)	(92,509,525 - 92,510,707)
sequence	gaattctgttctaattaatttttttaaagcacaaaaaaagaagaagagag gcctgctccaagctgtattgacaggactaaacatcccgactggctatttt tctgacctaaagcaagtgcttccaaggtctgaaaatagaatctttctttc ccgttcctctttgttcttgagaatcacagaataaagaatatgccagaccc acccccaaaaaaaaagaattctgttctattcctattttatttacatttga attgggaaccaatgttaactttcatcaaatactcttctatgcctattcaa atgctatgatttgctaatatcataaagtatatttatggatttcttgttgc tagttcattttcatgtgtccaagataagaatatttgataaagtattactg ttggtttagtgaacattttttatatttatgttactacattttctatgtta tttttactaatacctttttctcctatattgacaaataaagcttccctaaa atttgtctcttcctcggtatctggataacaatagaagtgccattgtacac atggacaaaccaggttcaggacactcctgaatctatagggtattctataa atccccagtggcacatcccagggagtcctcctgcttggtaatgtctccct cctccacgcatcctctgctacctgctggagaaaggtatttgctgtcttct ctgagtcagcactgctgtagatgtcctcacaactgtaccacatattctgt gagtggccagcccagaagtagaacttctgcacagtctttcttcccacaga tgctgctcatgtgctctctaggggactctacccttcctcctcgacgctat cattgtgagatgttctgtctgttttgctttgtttataatagggtttcagt atttagcccatgctatcctggaacttctaatcatcctgcctcagtctcct gagtgctggaattacaattcagtccttcctccttcttcctcgtcttcatc ttctctctctctcttcttccttctcttctctctctctctc	gaattcattcgataatttagaagattaactttggctaagagtctgaatga catgttcaaggcaccaatttgccttgctagtacccagacccaaccaccat tagctgatgatgaaggcagtttcttgttcagccttggcctgtgaacctag ggcaagtttactatctagactaaatgttaactcaatgacctgagtagccg gattagtaggtgagttctggttttgaagaaattgttggcattgtttgtag cagggcagtgtgggcagctctagcttgtattagagattaaaataccaaaa ttttcagtatcagctactggaaatttacagatactcatagagtgccctta gattcttgacagcagtttttcctttgttgcagaattgtcattacacatta tgaatattagaagttattttctaaactgccttaatttgtcctgcttttct gttgagtggacatgaggatgatgaatgacatctttgaacgttttacactg aagcacaagttggattgcttgtgaacagaaagagggtggaacagagttga gagtttggacctggttactacactggcagatgtgtgtttgatagctgata aagcaaacctgtgtgttttccccaaactcttagcaaaaaattgggttttt ttgtgccttggtttattttaatcatctctggattatctatccaaaaattg ttactgtgctaacattggggatatttcttgctggattgcatgttgctgtc ctgttattttctccctcccacccccaaagcaggcttgtcttttttttttt ttttttaattgtgtttatttggtttcttggggacaggatctttgtatagc ttgagctagcctggcattgctgtgtgtctaggctggtctggaatttgtgg tattcctaaccaagctagccttgaactttcagagtctctgtcaacagaaa ttcttaattatcatattatgctgctgcatcaccacccttcccctcccgtc tttgagatagggtctttatagcccactgtcctggactcactctctatata catcttgctagcttgactctgagagattcactggctctacttgcaagtcc tggtatactgtgtgcaacacaccctggctgtacacaggttatatgatcag catgctgatgtacacagga
quality values	Open. Hide. 9 8 22 17 58 62 47 41 54 62 62 39 43 62 62 47 62 62 47 62 62 62 62 62 47 62 62 35 35 56 62 59 56 44 38 38 45 59 38 38 49 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 59 62 62 59 62 59 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 58 58 52 54 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 49 54 58 58 58 48 58 58 54 58 54 58 54 54 47 58 54 42 52 54 58 54 54 54 58 54 58 52 52 54 52 54 54 54 58 58 46 54 41 58 54 54 58 54 58 58 58 53 58 58 47 49 58 51 54 58 58 50 50 49 54 51 58 47 48 52 33 58 58 45 31 41 45 44 48 51 54 54 58 51 58 40 51 46 40 49 58 28 51 50 58 58 52 58 58 51 40 58 51 52 41 52 47 54 53 53 53 52 54 54 52 39 58 46 40 50 46 51 51 58 50 50 58 48 43 20 51 58 49 28 32 23 53 32 58 58 58 49 51 58 52 53 53 39 32 53 52 50 50 39 13 38 39 53 42 50 52 41 53 58 35 42 54 40 53 34 38 25 46 37 40 49 52 47 42 39 34 53 42 49 54 41 38 42 35 42 37 49 42 45 37 35 52 45 52 40 49 51 39 45 46 52 17 52 40 34 30 42 42 45 31 49 37 24 42 39 23 54 35 28 37 40 37 37 37 27 40 37 40 40 32 40 53 54 53 40 32 22 21 52 32 31 32 34 23 34 35 35 43 40 37 30 52 25 30 31 52 32 36 31 40 36 40 35 26 34 31 51 51 31 41 18 45 37 39 31 15 40 31 43 41 26 32 31 17 30 43 34 21 29 19 30 35 36 31 33 32 30 9 20 30 28 31 51 28 37 21 33 22 24 32 27 46 27 31 29 46 24 46 46 25 28 24 29 47 28 37 24 48 37 37 26 31 43 29 33 30 47 46 28 48 25 30 38 32 21 22 32 48 36 38 31 36 48 41 37 30 32 31 30 31 29 30 31 26 31 41 30 33 30 33 38 34 33 32 29 31 31 14 30 25 20 32 31 20 33 31 20 26 21 14 26 31 26 24 19 24 34 10 23 32 15 27 24 27 17 24 15 22 26 20 9 28 15 25 28 38 14 15 31 31 25 24 20 26 20 7 18 25 23 25 9 10 17 17 9 4 4 4 9 4 4 4 4 4 9 25 16 21 6 24 13 30 16 33 28 33 10 10 27 29 29 11 28 17 18 14 8 7 4 5 3 12 23 16 14 15 15 10 10 6 5 4 4 4 3	Open. Hide. 62 35 39 47 62 47 32 54 62 62 56 51 45 34 28 24 45 43 29 23 38 43 49 46 43 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 49 54 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 56 62 62 62 49 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 54 58 58 54 58 54 54 58 58 58 58 54 58 54 58 46 58 58 58 58 40 58 52 54 58 58 58 54 41 39 58 58 58 58 54 54 52 58 54 54 45 39 54 58 58 58 54 54 52 54 42 58 58 58 58 58 39 58 58 58 54 52 52 54 58 58 58 58 42 51 58 58 41 51 50 58 58 50 58 58 58 58 58 58 58 53 58 51 53 46 41 24 39 47 45 58 58 49 51 42 42 49 28 52 58 58 58 44 51 41 30 54 54 58 49 40 58 58 58 58 58 58 51 51 47 40 58 46 50 58 58 46 58 53 39 37 58 58 37 51 46 53 53 40 51 52 53 53 52 58 58 35 31 41 47 43 41 52 53 42 37 32 11 58 58 58 40 45 58 52 46 41 31 40 43 50 52 53 53 49 41 38 39 26 51 40 50 49 54 50 47 31 40 35 54 54 52 52 49 49 39 52 41 42 41 27 40 49 32 31 45 34 15 53 40 52 52 53 39 34 53 39 51 35 32 35 37 54 54 40 37 33 33 54 54 37 31 54 36 32 47 39 35 42 38 22 54 42 37 37 41 19 38 26 36 42 51 21 47 31 53 53 53 53 51 49 49 49 49 51 49 49 46 49 47 30 25 32 31 32 33 21 41 30 52 26 33 33 51 30 30 36 17 51 24 30 30 17 33 51 51 24 14 14 16 9 32 12 15 26 31 51 31 28 22 26 34 24 16 21 41 28 32 18 20 38 31 29 19 31 32 27 36 17 25 35 33 28 31 28 36 31 30 32 32 36 29 23 24 31 19 37 23 31 31 11 9 30 10 21 32 22 18 29 41 5 11 10 20 36 25 11 7 13 29 31 14 9 14 19 21 31 32 26 21 32 21 32 26 22 14 29 31 27 28 16 30 42 31 24 17 5 15 8 17 13 13 30 17 33 29 38 5 5 9 18 11 33 47 9 6 12 10 23 34 11 16 9 18 30 32 15 8 14 16 10 30 15 21 33 18 20 32 27 30 25 25 22 21 23 16 29 8 14 20 31 32 11 19 25 33 31 16 21 24 31 29 19 8 19 21 34 21 20 28 10 27 11 16 13 14 7 3 6 13 40 17 17 19 16 14 22 28 15 5 6 16 24 14 14 15 13 15 11 11 5 6 11 16 15 18 22 8 13 7 16 16 13 13 7 6 4 4 7 8 8 27 6 16 20 6 12 4 8 10 15 5 10 8 21 16 12 4 5 3 6 8 5 19 7 20 6 7 6 20 6 8 15 13 17 5 6 18 15 9 21 4 4 1 4 6 6 3 2 3 9 15 3 2 12 5 8 7 4 2 4 4 23 4 4 8 4 7 13 4 6 3 3 3 13 3 5 3 3 3 7 4 4 4 4 4 3 8 8 3 5 1 2 6 5 6 11 7 21 20 21 16 7 5 6 5 22 4 6 5 4 23 7 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_92361224_92362344
seq2: B6Ng01-233B05.b_43_1082

seq1  GAATTCTGTTCTAATTAATTTTTTTAAAGCACAAAAAAAGAAGAAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTAATTAATTTTTTTAAAGCACAAAAAAAGAAGAAGAGAG  50

seq1  GCCTGCTCCAAGCTGTATTGACAGGACTAAACATCCCGACTGGCTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCCAAGCTGTATTGACAGGACTAAACATCCCGACTGGCTATTTT  100

seq1  TCTGACCTAAAGCAAGTGCTTCCAAGGTCTGAAAATAGAATCTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAAAGCAAGTGCTTCCAAGGTCTGAAAATAGAATCTTTCTTTC  150

seq1  CCGTTCCTCTTTGTTCTTGAGAATCACAGAATAAAGAATATGCCAGACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCCTCTTTGTTCTTGAGAATCACAGAATAAAGAATATGCCAGACCC  200

seq1  ACCCCCAAAAAAAAAGAATTCTGTTCTATTCCTATTTTATTTACATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAAAAAAAAAGAATTCTGTTCTATTCCTATTTTATTTACATTTGA  250

seq1  ATTGGGAACCAATGTTAACTTTCATCAAATACTCTTCTATGCCTATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAACCAATGTTAACTTTCATCAAATACTCTTCTATGCCTATTCAA  300

seq1  ATGCTATGATTTGCTAATATCATAAAGTATATTTATGGATTTCTTGTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGATTTGCTAATATCATAAAGTATATTTATGGATTTCTTGTTGC  350

seq1  TAGTTCATTTTCATGTGTCCAAGATAAGAATATTTGATAAAGTATTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATTTTCATGTGTCCAAGATAAGAATATTTGATAAAGTATTACTG  400

seq1  TTGGTTTAGTGAACATTTTTTATATTTATGTTACTACATTTTCTATGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTAGTGAACATTTTTTATATTTATGTTACTACATTTTCTATGTTA  450

seq1  TTTTTACTAATACCTTTTTCTCCTATATTGACAAATAAAGCTTCCCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTAATACCTTTTTCTCCTATATTGACAAATAAAGCTTCCCTAAA  500

seq1  ATTTGTCTCTTCCTCGGTATCTGGATAACAATAGAAGTGCCATTGTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTCTTCCTCGGTATCTGGATAACAATAGAAGTGCCATTGTACAC  550

seq1  ATGGACAAACCAGGTTCAGGACACTCCTGAATCTATAGGGTATTCTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAAACCAGGTTCAGGACACTCCTGAATCTATAGGGTATTCTATAA  600

seq1  ATCCCCAGTGGCACATCCCAGGGAGTCCTCCTGCTTGGTAATGTCTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGTGGCACATCCCAGGGAGTCCTCCTGCTTGGTAATGTCTCCCT  650

seq1  CCTCCACGCATCCTCTGCTACCTGCTGGAGAAAGGTATTTGCTGTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACGCATCCTCTGCTACCTGCTGGAGAAAGGTATTTGCTGTCTTCT  700

seq1  CTGAGTCAGCACTGCTGTAGATGTCCTCACAACTGTACCACATATTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAGCACTGCTGTAGATGTCCTCACAACTGTACCACATATTCTGT  750

seq1  GAGTGGCCAGCCCAGAAGTAGAACTTCTGCACAGTCTTTCTTCCCACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCCAGCCCAGAAGTAGAACTTCTGCACAGTCTTTCTTCCCACAGA  800

seq1  TGCTGCTCATGTGCTCTCTAGGGGACTCTACCCTTCCTCCTCGACGCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCATGTGCTCTCTAGGGGACTCTACCCTTCCTCCTCGACGCTAT  850

seq1  CATTGTGAGATGTTCTGTCTGTTTTGCTTTGTTTATAATAGGGTTTCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGAGATGTTCTGTCTGTTTTGCTTTGTTTATAATAGGGTTTCAGT  900

seq1  ATTTAGCCCATGCTATCCTGGAACTTCTAATCATCCTGCCTCAGTCTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCCCATGCTATCCTGGAACTTCTAATCATCCTGCCTCAGTCTCCT  950

seq1  GAGTGCTGGAATTACAATTCAGTCCTTCCTTCCTTCCTTCCTTCCTTCCT  1000
      ||||||||||||||||||||||||||||| ||||| ||||||  | | ||
seq2  GAGTGCTGGAATTACAATTCAGTCCTTCC-TCCTT-CTTCCT--CGT-CT  995

seq1  TCCTTTCTTTCTCTCTCTCTCTTTCTTCCTTC-CTTC-CTTTCTCTCTCT  1048
      || |    ||||||||||||| |||||||||| |||| || |||||||| 
seq2  TCAT---CTTCTCTCTCTCTC-TTCTTCCTTCTCTTCTCTCTCTCTCTC-  1040

seq1  TCCTTCCTTCCTTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTTCCT  1098
                                                        
seq2  --------------------------------------------------  1040

seq1  TCCTTCCTTTCTCTCTCTCTCTC  1121
                             
seq2  -----------------------  1040

seq1: chr5_92509525_92510707
seq2: B6Ng01-233B05.g_68_1236 (reverse)

seq1  TCC--TGTTCATCAGCATGCTGTTTTCATTATTTACACTTGTTTGCTCCA  48
      |||  ||| |||||||||||||     || || || || |||    | ||
seq2  TCCTGTGTACATCAGCATGCTG-----ATCATATA-ACCTGT---GTACA  41

seq1  GGCCAGGTGTGGTGGCACACAGGTTAATCCCAGCACTTGCAAGGTAGAGG  98
      | |  ||||| || ||||||||    || |||| |||||||| |||||| 
seq2  GCCAGGGTGT-GTTGCACACAG---TATACCAGGACTTGCAA-GTAGAGC  86

seq1  CAGGTGGATCTCTCAGAGTTCAAGGCTAGCCAGATGTATATAGAGAGTGA  148
      || ||| ||||||||||| |||| |||||| |||||||||||||||||||
seq2  CA-GTGAATCTCTCAGAG-TCAA-GCTAGCAAGATGTATATAGAGAGTGA  133

seq1  GTTCCAGGACAGTTGGGGCTATAAAGACCCTATCTCAAAGACGGGAGGGG  198
      | |||||||||||  |||||||||||||||||||||||||||||||||||
seq2  G-TCCAGGACAGT--GGGCTATAAAGACCCTATCTCAAAGACGGGAGGGG  180

seq1  -AGGGTGGTGATGCAGCAGCATAATATGATAA-TAAG-ATTTCTGTGGAC  245
       ||||||||||||||||||||||||||||||| |||| |||||||| |||
seq2  AAGGGTGGTGATGCAGCAGCATAATATGATAATTAAGAATTTCTGTTGAC  230

seq1  AGGAGACTCTGAAAGTTCAAGGCTAGCTTGG-TAGG-ATACCACAAATTC  293
      | ||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  A-GAGACTCTGAAAGTTCAAGGCTAGCTTGGTTAGGAATACCACAAATTC  279

seq1  CAGACCAGCCTAGACACACAGCAAATGCCAGGCTAGCTCAAGCTATACAA  343
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGACCAGCCTAGACACACAGC-AATGCCAGGCTAGCTCAAGCTATACAA  328

seq1  AGATCCTGTCCCCAAGAAACCAAATAAACACAATT-AAAAAAAAAAAAAA  392
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGATCCTGTCCCCAAGAAACCAAATAAACACAATTAAAAAAAAAAAAAAA  378

seq1  AAGACAAGCCTGCTTTGGGGGTGGGAGGGAGAAAATAACAGGACAGCAAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGCCTGCTTTGGGGGTGGGAGGGAGAAAATAACAGGACAGCAAC  428

seq1  ATGCAATCCAGCAAGAAATATCCCCAATGTTAGCACAGTAACAATTTTTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCCAGCAAGAAATATCCCCAATGTTAGCACAGTAACAATTTTTG  478

seq1  GATAGATAATCCAGAGATGATTAAAATAAACCAAGGCACAAAAAAACCCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAATCCAGAGATGATTAAAATAAACCAAGGCACAAAAAAACCCA  528

seq1  ATTTTTTGCTAAGAGTTTGGGGAAAACACACAGGTTTACTTTATCAGCTA  592
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTTTTGCTAAGAGTTTGGGGAAAACACACAGGTTTGCTTTATCAGCTA  578

seq1  TCAAACACACATCTGCCAGTGTAGTAACCAGGTCCAAACTCTCAACTCTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACACATCTGCCAGTGTAGTAACCAGGTCCAAACTCTCAACTCTG  628

seq1  TTCCACCCTCTTTCTGTTCACAAGCAATCCAACTTGTGCTTCAGTGTAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCCTCTTTCTGTTCACAAGCAATCCAACTTGTGCTTCAGTGTAAA  678

seq1  ACGTTCAAAGATGTCATTCATCATCCTCATGTCCACTCAACAGAAAAGCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCAAAGATGTCATTCATCATCCTCATGTCCACTCAACAGAAAAGCA  728

seq1  GGACAAATTAAGGCAGTTTAGAAAATAACTTCTAATATTCATAATGTGTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATTAAGGCAGTTTAGAAAATAACTTCTAATATTCATAATGTGTA  778

seq1  ATGACAATTCTGCAACAAAGGAAAAACTGCTGTCAAGAATCTAAGGGCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATTCTGCAACAAAGGAAAAACTGCTGTCAAGAATCTAAGGGCAC  828

seq1  TCTATGAGTATCTGTAAATTTCCAGTAGCTGATACTGAAAATTTTGGTAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGTATCTGTAAATTTCCAGTAGCTGATACTGAAAATTTTGGTAT  878

seq1  TTTAATCTCTAATACAAGCTAGAGCTGCCCACACTGCCCTGCTACAAACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTCTAATACAAGCTAGAGCTGCCCACACTGCCCTGCTACAAACA  928

seq1  ATGCCAACAATTTCTTCAAAACCAGAACTCACCTACTAATCCGGCTACTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAACAATTTCTTCAAAACCAGAACTCACCTACTAATCCGGCTACTC  978

seq1  AGGTCATTGAGTTAACATTTAGTCTAGATAGTAAACTTGCCCTAGGTTCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATTGAGTTAACATTTAGTCTAGATAGTAAACTTGCCCTAGGTTCA  1028

seq1  CAGGCCAAGGCTGAACAAGAAACTGCCTTCATCATCAGCTAATGGTGGTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAAGGCTGAACAAGAAACTGCCTTCATCATCAGCTAATGGTGGTT  1078

seq1  GGGTCTGGGTACTAGCAAGGCAAATTGGTGCCTTGAACATGTCATTCAGA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGGTACTAGCAAGGCAAATTGGTGCCTTGAACATGTCATTCAGA  1128

seq1  CTCTTAGCCAAAGTTAATCTTCTAAATTATCGAATGAATTC  1183
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGCCAAAGTTAATCTTCTAAATTATCGAATGAATTC  1169

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Alignment Information