BAC Information

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BAC

Clone NameB6Ng01-241C17
Chromosome5 (Build37)
Map Location 4,667,106 - 4,668,012
singlet/doubletsinglet
Overlap genenone
Upstream gene4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241C17.bB6Ng01-241C17.g
ACCGA051153GA051154
length9071,191
definitionB6Ng01-241C17.b B6Ng01-241C17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcaaagcagcaaggagagcaactaataagccagtcttcacaa
caggaagaaaattattgtgggaggcattagcagatataggcactaattat
gataattgaaaaggttcaagtagttaaacatagaagagagatttaggggg
caagaatgccagtagagacagaaggaaggggctcttgacttagcccccgg
aagaggtgatggtgactgagaactagcattatagtgacagaactaataag
ttgataaattaaaatgtgctttgaagatagggctgtcaggactggatgga
cgactggagcaggaaggaggacaacgaagaccctaggatgctctgagtgt
tgttagtggagccatgggtggatgctgcttattgtatactgagtggggag
atttagaaataagcacatctgagaagtcgcaaggctcccaggattgaatt
aatcagatttcccacggaaatgccaaattgtttgctgagtctttcaagtc
catgtctcagacagttcagaagatgagtacccaagacttgcaagaaatca
ccctgtaagacagtccacctgaaggggaagactcaagggagccagagata
agccatgacatccttaattctgacatccagtctgtacgtaagttaccagc
ttattgcttagtttaagttggacaaacatttgcctctaaaagaagtctga
ggatgatagaaaacataagtcataacatctaacagcatgtatgttatacc
aaggagctttctacattgatgaagtattggtttttagtatagaatagagt
ttagggcttggggaggggagtcaagagggtagcagaggcagagaaaggca
gagaggagagagtacagaagtgagggccggccatggccacgtggagagag
gggggga
gaattcctaaacctgataaacatcttcaatgcagtagttggatataaaat
tatctcaaataaatcaatggcctttctctacacaaaggataaacggactg
agaaagaaattagggaaacaacacccttcacaatagtcacaaatagtata
aaataccttggtgtgactctaactaaggaagtgaaagatctgtatgataa
gaacttcaagtctctgaagaaagaaattgaagaagatctcagaagatgga
aagatctcccatgctcatggattggcaggattaatatagtaaaaatggct
atcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcactcaaatagaaaaggcaatttgcaaattcatctgga
aaaataaaaaacctaggatagcaaaaactattctcaacaataaaagaacc
tctggtggaatcaccatgcctgacattaagctgtactacagagcaattgt
gataaaaactgcatggtactggtacagtgacagacaggtagatcaatgga
atagaattgaagacccagaaatgaatccacacacctatggtcacttactc
tttgacaagggagctaaaaccatccagtggaaaaaagacaacattttcaa
caaatggtgctggcacaactggcggttatcatgtagaagaatgtgaattg
atccacaccttgtactaaagtcaaatctaagtggttcaagaaaaccagag
acactgaaacttatagaggagaaagtggggaaaagcctcgaagatatggg
tacaggggaaaattcctgaatagaacagaaatggcttgtgctgtaagatc
gagaattgataaatgggacctcataaaattgcaaagcttctgtaaggcaa
aaggacactattcaataagacaaaaaggccaccaccagattgggaaaagg
atcttttaccttatcctaattcagacaggggactaattatccaattatat
acaaagagctcaagaatctgaactctagaattcaaatactcatttaaaaa
cagggttcagagctaaacaaagactatcagtgagaatacaaatggcctgg
agcacttgaaaactgttcagcattccttaatcatcagaaagcggtagtgg
aaacaaccctgaaagattccacacctctcacatatcaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4667106_4668012
seq2: B6Ng01-241C17.b_47_953 (reverse)

seq1  TCCCCCCCTCTCTCCACGTGGCCATGGCCGGCCCTCACTTCTGTACTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCTCTCTCCACGTGGCCATGGCCGGCCCTCACTTCTGTACTCTC  50

seq1  TCCTCTCTGCCTTTCTCTGCCTCTGCTACCCTCTTGACTCCCCTCCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGCCTTTCTCTGCCTCTGCTACCCTCTTGACTCCCCTCCCCAA  100

seq1  GCCCTAAACTCTATTCTATACTAAAAACCAATACTTCATCAATGTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAAACTCTATTCTATACTAAAAACCAATACTTCATCAATGTAGAAA  150

seq1  GCTCCTTGGTATAACATACATGCTGTTAGATGTTATGACTTATGTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGTATAACATACATGCTGTTAGATGTTATGACTTATGTTTTCT  200

seq1  ATCATCCTCAGACTTCTTTTAGAGGCAAATGTTTGTCCAACTTAAACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTCAGACTTCTTTTAGAGGCAAATGTTTGTCCAACTTAAACTAA  250

seq1  GCAATAAGCTGGTAACTTACGTACAGACTGGATGTCAGAATTAAGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAGCTGGTAACTTACGTACAGACTGGATGTCAGAATTAAGGATGT  300

seq1  CATGGCTTATCTCTGGCTCCCTTGAGTCTTCCCCTTCAGGTGGACTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTATCTCTGGCTCCCTTGAGTCTTCCCCTTCAGGTGGACTGTCT  350

seq1  TACAGGGTGATTTCTTGCAAGTCTTGGGTACTCATCTTCTGAACTGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTGATTTCTTGCAAGTCTTGGGTACTCATCTTCTGAACTGTCTG  400

seq1  AGACATGGACTTGAAAGACTCAGCAAACAATTTGGCATTTCCGTGGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGACTTGAAAGACTCAGCAAACAATTTGGCATTTCCGTGGGAAA  450

seq1  TCTGATTAATTCAATCCTGGGAGCCTTGCGACTTCTCAGATGTGCTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTAATTCAATCCTGGGAGCCTTGCGACTTCTCAGATGTGCTTATT  500

seq1  TCTAAATCTCCCCACTCAGTATACAATAAGCAGCATCCACCCATGGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCTCCCCACTCAGTATACAATAAGCAGCATCCACCCATGGCTCC  550

seq1  ACTAACAACACTCAGAGCATCCTAGGGTCTTCGTTGTCCTCCTTCCTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAACACTCAGAGCATCCTAGGGTCTTCGTTGTCCTCCTTCCTGCT  600

seq1  CCAGTCGTCCATCCAGTCCTGACAGCCCTATCTTCAAAGCACATTTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCGTCCATCCAGTCCTGACAGCCCTATCTTCAAAGCACATTTTAAT  650

seq1  TTATCAACTTATTAGTTCTGTCACTATAATGCTAGTTCTCAGTCACCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTTATTAGTTCTGTCACTATAATGCTAGTTCTCAGTCACCATC  700

seq1  ACCTCTTCCGGGGGCTAAGTCAAGAGCCCCTTCCTTCTGTCTCTACTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTCCGGGGGCTAAGTCAAGAGCCCCTTCCTTCTGTCTCTACTGGC  750

seq1  ATTCTTGCCCCCTAAATCTCTCTTCTATGTTTAACTACTTGAACCTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGCCCCCTAAATCTCTCTTCTATGTTTAACTACTTGAACCTTTTC  800

seq1  AATTATCATAATTAGTGCCTATATCTGCTAATGCCTCCCACAATAATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCATAATTAGTGCCTATATCTGCTAATGCCTCCCACAATAATTTT  850

seq1  CTTCCTGTTGTGAAGACTGGCTTATTAGTTGCTCTCCTTGCTGCTTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTTGTGAAGACTGGCTTATTAGTTGCTCTCCTTGCTGCTTTGAC  900

seq1  AGAATTC  907
      |||||||
seq2  AGAATTC  907