MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-245H09
Chromosome	5 (Build37)
Map Location	28,304,003 - 28,439,056
singlet/doublet	doublet
Overlap gene	LOC231069, Insig1
Upstream gene	Dpp6, B930011P16Rik, Speer4b, Paxip1, Htr5a, EG433862
Downstream gene	En2, Cnpy1, Prr8, Shh, LOC100039258
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13483 MGI:94921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B930011P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403186 MGI:2686223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Speer4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73526 MGI:1920776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paxip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55982 MGI:1890430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433862 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins

name	LOC231069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231069
definition	note : microfibrillar-associated protein 1 pseudogene pseudo : _no_value

name	Insig1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231070 MGI:1916289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	En2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnpy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269637 MGI:2442451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins

name	Shh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20423 MGI:98297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2374 ESTs, 22 Proteins

name	Dpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24429567 GeneID:13483 MGI:94921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dipeptidylpeptidase 6 transcript_id : NM_010075.1

name	B930011P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802837 GeneID:403186 MGI:2686223
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B930011P16 gene transcript_id : NM_207282.2

name	Speer4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21735468 GeneID:73526 MGI:1920776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 4b transcript_id : NM_028561.1

name	Paxip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734450 GeneID:55982 MGI:1890430
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAX interacting (with transcription-activation domain) protein 1 transcript_id : NM_018878.2

name	Htr5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370344 GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 5A transcript_id : NM_008314.2

name	EG433862 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374625 GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins product : predicted gene, EG433862 transcript_id : XM_485584.3

name	Insig1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378164 GeneID:231070 MGI:1916289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 1 transcript_id : NM_153526.3

name	En2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385154 GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engrailed 2 transcript_id : NM_010134.3

name	Cnpy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369857 GeneID:269637 MGI:2442451
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : canopy 1 homolog (zebrafish) transcript_id : NM_175651.3

name	Prr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374627 GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins product : proline rich 8, transcript variant 1 transcript_id : XM_355585.5

name	Shh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254618 GeneID:20423 MGI:98297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sonic hedgehog transcript_id : NM_009170.2

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253820 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 mRNAs, 1189 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472557.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253818 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2372 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472531.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253822 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 288 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472580.1

name	Dpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24429568 CCDS:CCDS19139.1 GeneID:13483 MGI:94921
definition	codon_start : 1 note : inversion, Chr 5, Harwell 6, proximal product : dipeptidylpeptidase 6 protein_id : NP_034205.1

name	B930011P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402317 GeneID:403186 MGI:2686223
definition	codon_start : 1 product : hypothetical protein LOC403186 protein_id : NP_997165.1

name	Speer4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735469 CCDS:CCDS19140.1 GeneID:73526 MGI:1920776
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : sperm-associated glutamate (E)-rich protein 4b; spermatogenic-associated glutamate (E)-rich protein 4b product : spermatogenesis associated glutamate (E)-rich protein 4b protein_id : NP_082837.1

name	Paxip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734451 GeneID:55982 MGI:1890430
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : Pax transcription activation domain interacting protein protein_id : NP_061366.2

name	Htr5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370345 CCDS:CCDS19141.1 GeneID:15563 MGI:96283
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine receptor 5A protein_id : NP_032340.2

name	EG433862 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374626 GeneID:433862 MGI:3642937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_485584.3

name	Insig1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943846 CCDS:CCDS19142.1 GeneID:231070 MGI:1916289
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 note : INSIG-1 membrane protein product : insulin induced gene 1 protein_id : NP_705746.1

name	En2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753752 CCDS:CCDS19143.1 GeneID:13799 MGI:95390
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030902 - hindbrain development [Evidence IGI]; GO:0030901 - midbrain development [Evidence IGI]; GO:0048666 - neuron development [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : engrailed 2 protein_id : NP_034264.1

name	Cnpy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316752 CCDS:CCDS19144.1 GeneID:269637 MGI:2442451
definition	codon_start : 1 product : canopy 1 homolog protein_id : NP_783582.1

name	Prr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374628 GeneID:381626 MGI:1919670
definition	codon_start : 1 product : proline rich 8 isoform 1 protein_id : XP_355585.5

name	Shh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21617861 CCDS:CCDS19146.1 GeneID:20423 MGI:98297
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0043237 - laminin-1 binding [Evidence IDA]; GO:0005113 - patched binding [Evidence IPI]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008209 - androgen metabolism [Evidence IMP]; GO:0001525 - angiogenesis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IDA] [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007154 - cell communication [Evidence IEA]; GO:0048468 - cell development [Evidence IMP]; GO:0001708 - cell fate specification [Evidence IGI] [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0009790 - embryonic development [Evidence IGI]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0048598 - embryonic morphogenesis [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IDA] [Evidence IMP]; GO:0030900 - forebrain development [Evidence IGI]; GO:0007507 - heart development [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP] [Evidence IGI]; GO:0016539 - intein-mediated protein splicing [Evidence IEA]; GO:0030324 - lung development [Evidence IMP] [Evidence IGI]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0001656 - metanephros development [Evidence IMP]; GO:0030901 - midbrain development [Evidence IGI]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP] [Evidence IDA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0007405 - neuroblast proliferation [Evidence IDA]; GO:0048663 - neuron fate commitment [Evidence IMP]; GO:0014003 - oligodendrocyte development [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0030850 - prostate gland development [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IDA]; GO:0030162 - regulation of proteolysis [Evidence IDA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence TAS]; GO:0007224 - smoothened signaling pathway [Evidence IGI] [Evidence IDA]; GO:0051146 - striated muscle cell differentiation [Evidence IMP] [Evidence IDA]; GO:0001658 - ureteric bud branching [Evidence IMP]; GO:0001570 - vasculogenesis [Evidence IDA] codon_start : 1 note : short digits product : sonic hedgehog protein_id : NP_033196.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253819 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472581.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253821 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472607.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253823 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472630.1

clone name	MSMg01-370E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-270D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215F05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-245H09.b	B6Ng01-245H09.g
ACC	GA054339	GA054340
length	909	1,121
definition	B6Ng01-245H09.b	B6Ng01-245H09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(28,438,152 - 28,439,056)	(28,304,003 - 28,305,081)
sequence	gaattccatcttgaacacgtgttcccaccagcaacttgtgttcccaagac ctcttgccttgtcatggagatacaccaacatagctggggtgaggctatca tggcccaggctgaagcccctgaagtcataaaaaggaaagctagaaccatg tgtaagtagtgacctctacagaggggtgaaacaaggttggacaagtagat gctgcttgggcagggatggagctcagttgcagagtcaggcctagtatgca cagggccctgggttggatctctagaaccaattaaaaagaaagatagcaca gatgctgtctgactgcacatcgtgaagactgagctccctgggaaagctaa gttttctctgccattcctttcaaggctttgctaaggctaagccattaggc ttagacagtaccaagggtccagcccagatgggactcattctgacctctgg ctgccctttccttagatcagagcaaggccagcaaggcacttcttaccttt ttggccccagtcagtgctggctaagggtgtgatgggaaggatggaaactg taaggatggggagatggtgcaaggagtgaagcgctgtgtgagcatcaggg cccgagcagagatctccagcacccactcatgggatggcagacatgggagg atccctgagccgttctggtcagccagtgtagctgtatctgtgagctccag gttcattgagaagccctgtctccaaaaaatgaggtgaaacaggggcagtt ggtggcacctgcctttaatcccaacactcagaggcagaggcaggcggatc tctgtgagttttgaggccagttctgacctacatagcaaattccaggacta gtcagggctacatagaaaaatccttgccttgggaaattaaaacaaatgaa agagagaga	gaattctgtttctatgtcaaccaatccaaaatagtgataaaatccaggag ctccagtcagacataaagaatttcagggaatgtgggaccttcagttctgg gattttttaaaaccctatatggaagtggatatttccttttgtaacgcctt ttctagtcatactccaggtgttattatttgcttcctgcctcattaataat gtttctacattccttcaatgactaatacaaaaaaatttctacacaaacta ttaatcagctcctgttacgggattaccagccactgcccacagaagagcca ctgtccacagaggaacctaatgggaaacttaaccaagtggatccgatggt gaaagtcagctacacccccaaattgactgctcccctagacagcatgaaac agcttaagagaaataacaccctcccttttcaccattggcttccttctccc catttaatcctctctctctctctctctctctctctctctctctctctctc tttaattttagaattacttagtatttatttcctgcaaaagcaaagactgt gtaatacatgttctccaggtataaaaacctcagtaaatactttgttgagt aagtaaattctagagttgctgtagtaactcaaacttaatataggtctata cttcaataaaattctgggattctttccttcttagtataaattctgcattt taaaaattagatattttctttatttacatttcaaatgttatcccttttcc tagtttccccttccaaaaatccctctatcctcttcccccctcaccctgct ccccagcccaccaacttcttgcttcctggcccaggcattccccctataat ggggcatagaacctttcacaggaccaagggccttctccttcacattgaat gactgactaggcccttcctccagcctacataatgcagctagagcccatga attcttctacattgttgatctttggatttgttgggtttaagttcccaaaa agctcttgctcctgggtttacctggtttagtttcatattggttatttcct cggtatgggggcctgtcaaacgcctttcgcctccgtgggggtacattctc tgaccctcctttatattgggg
quality values	Open. Hide. 43 26 9 18 51 47 15 11 49 41 41 52 58 31 48 33 29 54 58 58 58 58 58 62 62 39 31 62 41 39 11 22 10 12 15 27 56 30 24 46 62 56 56 56 56 42 54 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 62 47 44 59 51 62 62 59 51 44 38 28 33 34 59 51 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 56 62 62 62 62 62 44 54 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 47 56 56 62 62 51 62 62 62 62 62 62 54 54 62 62 62 62 62 62 56 46 62 62 46 56 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 56 62 62 62 62 56 62 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 54 54 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 41 62 62 62 62 62 62 54 47 62 62 62 62 62 42 62 38 43 62 62 54 54 54 54 54 58 54 58 54 41 58 58 52 58 58 58 58 58 48 45 33 58 42 41 45 52 30 39 45 58 54 52 58 58 58 58 47 45 42 45 54 54 41 54 48 54 58 29 52 31 48 52 46 39 58 47 29 31 34 29 58 47 54 45 41 45 38 22 36 54 52 54 58 39 54 53 41 32 29 47 50 49 53 46 50 51 58 58 58 38 50 50 52 49 41 34 58 37 41 51 58 32 47 32 29 58 37 21 50 47 50 42 58 39 18 43 48 37 36 36 50 53 54 58 39 52 53 31 50 41 41 40 39 52 36 53 32 42 58 53 41 39 40 52 41 58 53 45 53 25 47 34 18 50 40 35 37 43 50 39 33 58 42 29 35 19 54 50 28 51 58 50 39 53 42 39 42 49 53 40 53 51 51 51 38 34 50 54 31 51 37 47 54 54 54 40 28 23 54 51 46 40 35 22 6 11 39 53 34 53 33 37 35 32 16 29 53 40 37 46 53 52 31 33 22 26 46 16 18 33 33 37 52 42 40 5 7 27 20 37 22 32 27 54 20 32 31 21 19 31 29 34 18 25 28 33 32 32 32 31 24 32 33 22 32 32 45 29 28 39 26 21 9 21 37 15 11 8 25 22 40 33 18 27 9 21 28 27 30 16 8 8 5 18 19 38 32 33 33 24 12 26 16 12 14 9 32 32 31 15 31 51 31 31 34 34 34 15 45 45 24 51 51 32 31 22 6 12 10 7 15 9 12 25 31 36 28 42 22 15 17 14 6 27 16 31 32 7 7 9 22 31 15 20 14 37 16 31 11 5 13 9 11 5 6	Open. Hide. 62 49 45 47 62 62 54 54 62 62 50 38 39 21 32 32 32 21 21 32 38 44 59 62 62 62 59 44 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 54 54 59 62 62 62 62 59 62 59 59 51 50 54 56 59 62 62 62 62 62 62 62 59 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 56 56 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 51 51 50 50 51 51 44 32 44 51 56 47 56 56 44 44 31 56 50 50 50 56 56 50 38 37 16 23 51 42 43 56 56 62 56 51 56 56 37 62 56 42 62 62 62 56 62 43 56 56 42 62 56 56 62 56 56 56 51 56 51 43 51 51 46 56 42 38 43 39 56 42 38 16 24 32 42 42 47 62 56 56 32 41 40 56 46 46 26 38 56 46 46 56 56 47 43 43 15 56 26 47 62 62 32 56 52 52 30 52 48 43 52 45 43 47 43 38 31 52 30 22 22 28 25 27 31 27 21 8 24 27 43 52 46 50 34 25 31 42 42 29 26 31 31 35 35 35 21 43 35 50 49 52 35 49 42 37 52 46 41 38 36 39 52 52 34 35 52 43 39 38 42 26 42 14 32 43 54 42 42 39 38 42 39 54 47 39 52 27 33 40 52 39 25 52 30 48 54 48 31 41 49 46 52 45 15 13 52 47 41 36 35 45 47 19 28 26 42 47 14 14 33 52 18 26 50 42 23 33 42 23 52 37 31 20 50 38 19 32 50 34 48 41 29 40 39 41 47 38 48 51 45 29 46 27 26 25 22 20 24 42 50 50 47 34 9 8 19 29 17 33 37 50 37 29 37 37 28 7 31 19 28 33 34 33 32 41 40 34 17 32 32 33 48 29 28 22 28 26 35 42 23 25 24 39 26 27 27 27 28 15 18 19 16 43 6 43 25 19 14 27 25 23 6 15 33 17 17 26 21 17 15 15 16 16 41 5 8 19 18 26 23 37 32 39 20 31 17 16 22 41 39 34 42 27 40 30 30 28 14 36 37 27 6 19 14 22 22 10 39 14 26 28 26 26 18 29 28 16 13 15 16 17 27 17 9 6 25 35 32 24 19 21 32 18 16 7 24 25 18 27 21 12 26 21 16 35 7 9 28 42 29 28 20 21 31 24 51 22 10 25 53 24 24 20 13 37 24 23 18 22 32 38 31 23 13 15 18 18 22 21 32 14 30 29 10 9 5 8 21 25 19 6 13 12 17 6 21 23 8 24 14 12 9 20 14 20 9 26 12 8 19 6 23 27 17 14 27 6 6 21 26 17 6 25 7 13 32 32 29 20 33 15 9 18 6 10 7 27 30 6 7 21 25 6 20 6 13 21 25 10 9 6 12 15 6 13 6 30 42 42 42 42 18 12 9 6 8 14 14 12 13 16 11 6 11 25 26 26 23 21 16 19 25 23 24 31 15 9 19 26 13 31 17 27 16 6 5 6 5 7 18 31 32 32 31 5 9 5 10 9 31 11 29 15 12 5 29 21 27 11 11 9 9 5 10 27 16 25 6 8 7 27 32 32 27 8 21 9 5 5 11 17 8 7 16 11 8 11 10 23 9 21 7 11 12 22 6 8 14 13 18 27 32 27 24

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_28438152_28439056
seq2: B6Ng01-245H09.b_48_956 (reverse)

seq1  TCTCTCTCTTTCATTTTGTTTTATTTTCCAAGGC-AGGGTTTTTCTATGT  49
      ||||||||||||||||  ||| |||| ||||||| ||| |||||||||||
seq2  TCTCTCTCTTTCATTTGTTTTAATTTCCCAAGGCAAGGATTTTTCTATGT  50

seq1  AGCCCTGACT-GTCCTGGAATTTGCTATGTAGGTCAG-ACTGGCCTC-AA  96
      |||||||||| |||||||||||||||||||||||||| ||||||||| ||
seq2  AGCCCTGACTAGTCCTGGAATTTGCTATGTAGGTCAGAACTGGCCTCAAA  100

seq1  ACTCACAGAGATCCGCCTGCCTCTGCCTCCTGAGTGTTGGGATTAAAGGC  146
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTCACAGAGATCCGCCTGCCTCTGCCT-CTGAGTGTTGGGATTAAAGGC  149

seq1  AGGTGCCACC-ACTGCCCCTGTTTCACCTCATTTTTTGGAGACAGGGCTT  195
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCACCAACTGCCCCTGTTTCACCTCATTTTTTGGAGACAGGGCTT  199

seq1  CTCAATGAACCTGGAGCTCACAGATACAGCTACACTGGCTGACCAGAACG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGAACCTGGAGCTCACAGATACAGCTACACTGGCTGACCAGAACG  249

seq1  GCTCAGGGATCCTCCCATGTCTGCCATCCCATGAGTGGGTGCTGGAGATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGATCCTCCCATGTCTGCCATCCCATGAGTGGGTGCTGGAGATC  299

seq1  TCTGCTCGGGCCCTGATGCTCACACAGCGCTTCACTCCTTGCACCATCTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCGGGCCCTGATGCTCACACAGCGCTTCACTCCTTGCACCATCTC  349

seq1  CCCATCCTTACAGTTTCCATCCTTCCCATCACACCCTTAGCCAGCACTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTTACAGTTTCCATCCTTCCCATCACACCCTTAGCCAGCACTGA  399

seq1  CTGGGGCCAAAAAGGTAAGAAGTGCCTTGCTGGCCTTGCTCTGATCTAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCCAAAAAGGTAAGAAGTGCCTTGCTGGCCTTGCTCTGATCTAAG  449

seq1  GAAAGGGCAGCCAGAGGTCAGAATGAGTCCCATCTGGGCTGGACCCTTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGCAGCCAGAGGTCAGAATGAGTCCCATCTGGGCTGGACCCTTGG  499

seq1  TACTGTCTAAGCCTAATGGCTTAGCCTTAGCAAAGCCTTGAAAGGAATGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTAAGCCTAATGGCTTAGCCTTAGCAAAGCCTTGAAAGGAATGG  549

seq1  CAGAGAAAACTTAGCTTTCCCAGGGAGCTCAGTCTTCACGATGTGCAGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAACTTAGCTTTCCCAGGGAGCTCAGTCTTCACGATGTGCAGTC  599

seq1  AGACAGCATCTGTGCTATCTTTCTTTTTAATTGGTTCTAGAGATCCAACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCATCTGTGCTATCTTTCTTTTTAATTGGTTCTAGAGATCCAACC  649

seq1  CAGGGCCCTGTGCATACTAGGCCTGACTCTGCAACTGAGCTCCATCCCTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCCTGTGCATACTAGGCCTGACTCTGCAACTGAGCTCCATCCCTG  699

seq1  CCCAAGCAGCATCTACTTGTCCAACCTTGTTTCACCCCTCTGTAGAGGTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCAGCATCTACTTGTCCAACCTTGTTTCACCCCTCTGTAGAGGTC  749

seq1  ACTACTTACACATGGTTCTAGCTTTCCTTTTTATGACTTCAGGGGCTTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTACACATGGTTCTAGCTTTCCTTTTTATGACTTCAGGGGCTTCA  799

seq1  GCCTGGGCCATGATAGCCTCACCCCAGCTATGTTGGTGTATCTCCATGAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCCATGATAGCCTCACCCCAGCTATGTTGGTGTATCTCCATGAC  849

seq1  AAGGCAAGAGGTCTTGGGAACACAAGTTGCTGGTGGGAACACGTGTTCAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGAGGTCTTGGGAACACAAGTTGCTGGTGGGAACACGTGTTCAA  899

seq1  GATGGAATTC  905
      ||||||||||
seq2  GATGGAATTC  909

seq1: chr5_28304003_28305081
seq2: B6Ng01-245H09.g_69_1189

seq1  GAATTCTGTTTCTATGTCAACCAATCCAAAATAGTGATAAAATCCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCTATGTCAACCAATCCAAAATAGTGATAAAATCCAGGAG  50

seq1  CTCCAGTCAGACATAAAGAATTTCAGGGAATGTGGGACCTTCAGTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCAGACATAAAGAATTTCAGGGAATGTGGGACCTTCAGTTCTGG  100

seq1  GATTTTTTAAAACCCTATATGGAAGTGGATATTTCCTTTTGTAACGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTAAAACCCTATATGGAAGTGGATATTTCCTTTTGTAACGCCTT  150

seq1  TTCTAGTCATACTCCAGGTGTTATTATTTGCTTCCTGCCTCATTAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCATACTCCAGGTGTTATTATTTGCTTCCTGCCTCATTAATAAT  200

seq1  GTTTCTACATTCCTTCAATGACTAATACAAAAAAATTTCTACACAAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACATTCCTTCAATGACTAATACAAAAAAATTTCTACACAAACTA  250

seq1  TTAATCAGCTCCTGTTACGGGATTACCAGCCACTGCCCACAGAAGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGCTCCTGTTACGGGATTACCAGCCACTGCCCACAGAAGAGCCA  300

seq1  CTGTCCACAGAGGAACCTAATGGGAAACTTAACCAAGTGGATCCGATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCACAGAGGAACCTAATGGGAAACTTAACCAAGTGGATCCGATGGT  350

seq1  GAAAGTCAGCTACACCCCCAAATTGACTGCTCCCCTAGACAGCATGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCAGCTACACCCCCAAATTGACTGCTCCCCTAGACAGCATGAAAC  400

seq1  AGCTTAAGAGAAATAACACCCTCCCTTTTCACCATTGGCTTCCTTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGAGAAATAACACCCTCCCTTTTCACCATTGGCTTCCTTCTCCC  450

seq1  CATTTAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  500

seq1  TTTAATTTTAGAATTACTTAGTATTTATTTCCTGCAAAAGCAAAGACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTAGAATTACTTAGTATTTATTTCCTGCAAAAGCAAAGACTGT  550

seq1  GTAATACATGTTCTCCAGGTATAAAAACCTCAGTAAATAC-TTGTTGAGT  599
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAATACATGTTCTCCAGGTATAAAAACCTCAGTAAATACTTTGTTGAGT  600

seq1  AAGTAAATTCTAGAGTTGCTGTAGTAACTCAAACTTAATATAGGTCTATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTCTAGAGTTGCTGTAGTAACTCAAACTTAATATAGGTCTATA  650

seq1  CTTCAATAAAATTCTGGGATTCTTTCCTTCTTAGTATAAATTCTGCATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATAAAATTCTGGGATTCTTTCCTTCTTAGTATAAATTCTGCATTT  700

seq1  TAAAAATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTCC  750

seq1  TAGTTTCCCC-TCCAAAAATCCC-CTATCCTCTT-CCCCCTCACCCTGCT  796
      |||||||||| |||||||||||| |||||||||| |||||||||||||||
seq2  TAGTTTCCCCTTCCAAAAATCCCTCTATCCTCTTCCCCCCTCACCCTGCT  800

seq1  CCCCAGCCCACCAACTTC-TGCTTCCTGGCCCAGGCATT-CCCCTATAAT  844
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  CCCCAGCCCACCAACTTCTTGCTTCCTGGCCCAGGCATTCCCCCTATAAT  850

seq1  GGGGCATAGAACC-TTCACAGGACCAAGGG-CTTCT-CTTCCCATTG-AT  890
      ||||||||||||| |||||||||||||||| ||||| |||| ||||| ||
seq2  GGGGCATAGAACCTTTCACAGGACCAAGGGCCTTCTCCTTCACATTGAAT  900

seq1  GACTGACTAGGCCC-TCCT-CAG-CTACAT-ATGCAGCTAGAG-CCATGA  935
      |||||||||||||| |||| ||| |||||| |||||||||||| ||||||
seq2  GACTGACTAGGCCCTTCCTCCAGCCTACATAATGCAGCTAGAGCCCATGA  950

seq1  GT--CTCTCCAT--GTGTTCTTT-GATTGGT--GGTTTA--GTCCCAGAG  976
       |   ||| |||   || ||||| |||| ||  ||||||   ||||| | 
seq2  ATTCTTCTACATTGTTGATCTTTGGATTTGTTGGGTTTAAGTTCCCAAAA  1000

seq1  AGCTC-TGCT-CTGGGTTTA-CTGG-TTAG-TTCATATT-GTTA-TTCCT  1019
      ||||| |||| ||||||||| |||| |||| |||||||| |||| |||||
seq2  AGCTCTTGCTCCTGGGTTTACCTGGTTTAGTTTCATATTGGTTATTTCCT  1050

seq1  C-GTATGGGG--CTG-CAAAC-CCCTTCAGCTCCTT--GGGTACATTCTC  1062
      | ||||||||  ||| ||||| || |||  |||| |  ||||||||||||
seq2  CGGTATGGGGGCCTGTCAAACGCCTTTCGCCTCCGTGGGGGTACATTCTC  1100

seq1  T--AGCTCCTT--TATTGGGG  1079
      |    ||||||  ||||||||
seq2  TGACCCTCCTTTATATTGGGG  1121

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Alignment Information