BAC Information

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BAC

Clone NameB6Ng01-251I22
Chromosome5 (Build37)
Map Location 151,084,207 - 151,219,156
singlet/doubletdoublet
Overlap geneFry, LOC100042068
Upstream geneAlox5ap, 6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2, LOC667470
Downstream geneGm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708, LOC625175, LOC100042166
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251I22.bB6Ng01-251I22.g
ACCGA058787GA058788
length1,1321,060
definitionB6Ng01-251I22.b B6Ng01-251I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,084,207 - 151,085,346)(151,218,087 - 151,219,156)
sequence
gaattcctgatattctgctttggttagttggagccttaccagaagaaccc
ttttgcaaactgggtgtggttttgggtttgtttgtttgagttctaaaaaa
tacatcagcaaaccccaaatacaaggtggatttcccagtgtgctttttgt
tgttttgataaagcacaacaaaccaaaagtaattgggaaggagggggctt
atttagctcataggttacatacagtccatcactgagggaagaaactgaag
cagagaccacagaaaaatgtggtcagtggcttgccacctctgccttgctc
agcctgcttttaaaacaaaaaccaaaacaaaacaaagcaaaacagcccag
gacctcttgcccagggatgacagtgccacagtgagctgggtcctccttca
gcactctgaaatcatgaaaaaccccatagtcatgcccaggtgccagtgtt
atgcaggcgattcctcagttgagactctctcttcccaggcgtgtcacgtt
gacaaaaactaactgtgacagtggagttgggggaaaggcaagcagactga
tctattcacatagtccttctttgagagcagggcaggggagatgcttaaat
gagacatgtctcccataggctcagatatttgaattttcagtccccagttg
gtggcgctgtttggggaggttttggtttggccttgctggtagacctgggg
atgccttctagagtaaaaagccctgcctactttcaggtcactctgccgct
tgtaaatccatgagctctcagcttcttgttcctgtaaggatgcttgccgc
ttgtctctatgccttgctgctatgatgggcgccattcccctctgaacggg
aagccccagtgaacttcctttcctcgagttgccatggtcacctttttctt
atcccagcaacagaaaaggaaccaatatttcagtggggctgaggatcaca
ttagttacttgtgtgtctctgtgaaaaaaatacctgacaaactgatgaaa
gggtcaggtttagcctgcaggcaggaagccagactgcatgagtctgctgc
aggtttcattccagagctgaaagctgatgttgtcttcctcctcccattga
atcattcagattgcaaggaatagtcactatat
gaattcactttgcagaccaggctggcctcgaactcagaaatctgcctgcc
tctgtctcctgattgctgggattataggcgtgtgccaccaccgcccagct
cagagagctattcttaagcaatctcttaaatgaatgcattcccaggaaaa
cacagagtaagagccactcaaacctgttcagtgcagtggcatgacagggt
gtgttcccaggtggcctgtccctacctgaagcagctgctgaggctttgct
gctggccgtgaatcgatagaaaggtgggttgtcacagtgctggacgatgg
ggttcactggctctgtctgctgcagctcaaagagaagctcttccatagtc
tggatggtgttattccgacacaggtaggttgccacctttttaatcttgga
aaaagaaaataaagggaaggtatactttctatcagagtgttgggctggaa
ccccctcgttgtggggcacactgccgtctgatactgttcatccaacaact
gaactctgctatccttggataacccaagtattggggttaaagccacttta
tacaggcactgtcttgagtggcttaattaaaaaacaaacaaacaaacaaa
caaacaaacaaacaaacaaacaaacattacttttagggtgaactgagtcg
atttaagccaaaaacattgtaagattttactggtgtccagaggcacaagg
cacttatatgacagaaacgattaattgtatccactctgggaaaataactg
ctatttttattaataagggaaaacagtctctcccatggtggcttgaatga
aaatagcccccattggctcacaggtttgaaatctcggtccccggttggtg
gaactgtttgagaaggatcaggggtgtggcattgttgggggaaggatgtc
actatgggtaggctttgaggattaaaagctagcccaagtctcctcctttc
ttcttgctgctgtctaatacgatggggatgaagctctcagctactgctcc
agcacagctgcctgttcctgccatgtcgtcatggactcaccctaaatact
gtcagggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151084207_151085346
seq2: B6Ng01-251I22.b_44_1175

seq1  GAATTCCTGATATTCTGCTTTGGTTAGTTGGAGCCTTACCAGAAGAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATATTCTGCTTTGGTTAGTTGGAGCCTTACCAGAAGAACCC  50

seq1  TTTTGCAAACTGGGTGTGGTTTTGGGTTTGTTTGTTTGAGTTCTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAAACTGGGTGTGGTTTTGGGTTTGTTTGTTTGAGTTCTAAAAAA  100

seq1  TACATCAGCAAACCCCAAATACAAGGTGGATTTCCCAGTGTGCTTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAGCAAACCCCAAATACAAGGTGGATTTCCCAGTGTGCTTTTTGT  150

seq1  TGTTTTGATAAAGCACAACAAACCAAAAGTAATTGGGAAGGAGGGGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATAAAGCACAACAAACCAAAAGTAATTGGGAAGGAGGGGGCTT  200

seq1  ATTTAGCTCATAGGTTACATACAGTCCATCACTGAGGGAAGAAACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTCATAGGTTACATACAGTCCATCACTGAGGGAAGAAACTGAAG  250

seq1  CAGAGACCACAGAAAAATGTGGTCAGTGGCTTGCCACCTCTGCCTTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCACAGAAAAATGTGGTCAGTGGCTTGCCACCTCTGCCTTGCTC  300

seq1  AGCCTGCTTTTAAAACAAAAACCAAAACAAAACAAAGCAAAACAGCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTTTTAAAACAAAAACCAAAACAAAACAAAGCAAAACAGCCCAG  350

seq1  GACCTCTTGCCCAGGGATGACAGTGCCACAGTGAGCTGGGTCCTCCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTGCCCAGGGATGACAGTGCCACAGTGAGCTGGGTCCTCCTTCA  400

seq1  GCACTCTGAAATCATGAAAAACCCCATAGTCATGCCCAGGTGCCAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGAAATCATGAAAAACCCCATAGTCATGCCCAGGTGCCAGTGTT  450

seq1  ATGCAGGCGATTCCTCAGTTGAGACTCTCTCTTCCCAGGCGTGTCACGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCGATTCCTCAGTTGAGACTCTCTCTTCCCAGGCGTGTCACGTT  500

seq1  GACAAAAACTAACTGTGACAGTGGAGTTGGGGGAAAGGCAAGCAGACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAACTAACTGTGACAGTGGAGTTGGGGGAAAGGCAAGCAGACTGA  550

seq1  TCTATTCACATAGTCCTTCTTTGAGAGCAGGGCAGGGGAGATGCTTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCACATAGTCCTTCTTTGAGAGCAGGGCAGGGGAGATGCTTAAAT  600

seq1  GAGACATGTCTCCCATAGGCTCAGATATTTGAATTTTCAGTCCCCAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGTCTCCCATAGGCTCAGATATTTGAATTTTCAGTCCCCAGTTG  650

seq1  GTGGCGCTGTTTGGGGAGGTTTTGGTTTGGCCTTGCTGGTAGACCTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGCTGTTTGGGGAGGTTTTGGTTTGGCCTTGCTGGTAGACCTGGGG  700

seq1  ATGCCTTCTAGAGTAAAAAGCCCTGCCTACTTTCAGGTCACTCTGCCGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCTAGAGTAAAAAGCCCTGCCTACTTTCAGGTCACTCTGCCGCT  750

seq1  TGTAAATCCATGAGCTCTCAGCTTCTTGTTCCTGTAAGGATGCTTGCCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCCATGAGCTCTCAGCTTCTTGTTCCTGTAAGGATGCTTGCCGC  800

seq1  TTGTCTCTATGCCTTGCTGCTATGATGGGCGCCATTCCCCTCTGAACGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTATGCCTTGCTGCTATGATGGGCGCCATTCCCCTCTGAACGGG  850

seq1  AAGCCCCAGTGAACTTCC-TTCCTCGAGTTGCCATGGTCACC-TTTTCTT  898
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  AAGCCCCAGTGAACTTCCTTTCCTCGAGTTGCCATGGTCACCTTTTTCTT  900

seq1  ATCCCAGCAACAGAAAAGGAACCAATATTTCAGTGGGGCTGAGGATCACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCAACAGAAAAGGAACCAATATTTCAGTGGGGCTGAGGATCACA  950

seq1  TTAGTTACTTGTGTTGTCTCTGTGAAAAAAATACCTGACAAACTGATG-A  997
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  TTAGTTACTTGTG-TGTCTCTGTGAAAAAAATACCTGACAAACTGATGAA  999

seq1  AGGGTCAGGTTTAGCCTGCAGGCAGGGAAGGCAGGACTGCAGGAGCCCGC  1047
      |||||||||||||||||||||||| ||||| || ||||||| ||| | ||
seq2  AGGGTCAGGTTTAGCCTGCAGGCA-GGAAGCCA-GACTGCATGAGTCTGC  1047

seq1  TGCAGGGGTTCCATTCCAGAAGCTGAGAGCTGATGTTGGTTCTCCTCCCC  1097
      ||||  |||| |||||||| |||||| |||||||||| ||  |||||| |
seq2  TGCA--GGTTTCATTCCAG-AGCTGAAAGCTGATGTT-GTCTTCCTCCTC  1093

seq1  CTTTTAATTCATCCAGGATCGCAAGGAATAGTGCCACCTATAT  1140
      |  || | |||| || ||| ||||||||||||  || ||||||
seq2  CCATTGAATCATTCA-GATTGCAAGGAATAGT--CA-CTATAT  1132

seq1: chr5_151218087_151219156
seq2: B6Ng01-251I22.g_64_1123 (reverse)

seq1  GCTCACTGACAGTTTTTGGGGGTGAGTCCATGGCCAACATGGCAGGAAAC  50
      |||| |||||||| |||  |||||||||||| | | |||||||||| |||
seq2  GCTCCCTGACAGTATTT-AGGGTGAGTCCAT-GACGACATGGCAGG-AAC  47

seq1  AGGCAGGCTTGGTGCTGGAGCAGTAGCTGAGAGCTTTACAT-CCCATCGT  99
      ||||| |||  |||||||||||||||||||||||||  ||| ||||||||
seq2  AGGCA-GCT--GTGCTGGAGCAGTAGCTGAGAGCTT--CATCCCCATCGT  92

seq1  A-TAGACAGCAGCAAGAAGAAAGGGAGAGACTTGGGCCTAGGCTTTTAAA  148
      | ||||||||||||||||||||||  |||||||||| ||| |||||| ||
seq2  ATTAGACAGCAGCAAGAAGAAAGGAGGAGACTTGGG-CTA-GCTTTT-AA  139

seq1  TCCTCAAAGCCTACCCATAGTGACATCCTTCCCCCAACAATGCCACACCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCTCAAAGCCTACCCATAGTGACATCCTTCCCCCAACAATGCCACA-CC  188

seq1  CCTGATCCTTCTCAAACAGTTCCACCAACCGGGGACCGAGATTTCAAACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCCTTCTCAAACAGTTCCACCAACCGGGGACCGAGATTTCAAACC  238

seq1  TGTGAGCCAATGGGGGCTATTTTCATTCAAGCCACCATGGGAGAGACTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCAATGGGGGCTATTTTCATTCAAGCCACCATGGGAGAGACTGT  288

seq1  TTTCCCTTATTAATAAAAATAGCAGTTATTTTCCCAGAGTGGATACAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTATTAATAAAAATAGCAGTTATTTTCCCAGAGTGGATACAATT  338

seq1  AATCGTTTCTGTCATATAAGTGCCTTGTGCCTCTGGACACCAGTAAAATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTTTCTGTCATATAAGTGCCTTGTGCCTCTGGACACCAGTAAAATC  388

seq1  TTACAATGTTTTTGGCTTAAATCGACTCAGTTCACCCTAAAAGTAATGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGTTTTTGGCTTAAATCGACTCAGTTCACCCTAAAAGTAATGTT  438

seq1  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAATTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAATTAA  488

seq1  GCCACTCAAGACAGTGCCTGTATAAAGTGGCTTTAACCCCAATACTTGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCAAGACAGTGCCTGTATAAAGTGGCTTTAACCCCAATACTTGGG  538

seq1  TTATCCAAGGATAGCAGAGTTCAGTTGTTGGATGAACAGTATCAGACGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAAGGATAGCAGAGTTCAGTTGTTGGATGAACAGTATCAGACGGC  588

seq1  AGTGTGCCCCACAACGAGGGGGTTCCAGCCCAACACTCTGATAGAAAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCCCACAACGAGGGGGTTCCAGCCCAACACTCTGATAGAAAGTA  638

seq1  TACCTTCCCTTTATTTTCTTTTTCCAAGATTAAAAAGGTGGCAACCTACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCCTTTATTTTCTTTTTCCAAGATTAAAAAGGTGGCAACCTACC  688

seq1  TGTGTCGGAATAACACCATCCAGACTATGGAAGAGCTTCTCTTTGAGCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGGAATAACACCATCCAGACTATGGAAGAGCTTCTCTTTGAGCTG  738

seq1  CAGCAGACAGAGCCAGTGAACCCCATCGTCCAGCACTGTGACAACCCACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACAGAGCCAGTGAACCCCATCGTCCAGCACTGTGACAACCCACC  788

seq1  TTTCTATCGATTCACGGCCAGCAGCAAAGCCTCAGCAGCTGCTTCAGGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCGATTCACGGCCAGCAGCAAAGCCTCAGCAGCTGCTTCAGGTA  838

seq1  GGGACAGGCCACCTGGGAACACACCCTGTCATGCCACTGCACTGAACAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGGCCACCTGGGAACACACCCTGTCATGCCACTGCACTGAACAGG  888

seq1  TTTGAGTGGCTCTTACTCTGTGTTTTCCTGGGAATGCATTCATTTAAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGGCTCTTACTCTGTGTTTTCCTGGGAATGCATTCATTTAAGAG  938

seq1  ATTGCTTAAGAATAGCTCTCTGAGCTGGGCGGTGGTGGCACACGCCTATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAAGAATAGCTCTCTGAGCTGGGCGGTGGTGGCACACGCCTATA  988

seq1  ATCCCAGCAATCAGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCAATCAGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCA  1038

seq1  GCCTGGTCTGCAAAGTGAATTC  1070
      ||||||||||||||||||||||
seq2  GCCTGGTCTGCAAAGTGAATTC  1060