BAC Information

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BAC

Clone NameB6Ng01-251M11
Chromosome5 (Build37)
Map Location 116,434,191 - 116,434,805
singlet/doubletsinglet
Overlap geneCit
Upstream geneSppl3, Acads, AA407659, 2410014A08Rik, Cabp1, Pop5, Rnf10, Coq5, Dynll1, Sfrs9, 2010003O18Rik, Triap1, Cox6a1, Msi1, Pla2g1b, Sirt4, LOC638021, Pxn, Arbp, Gcn1l1, LOC100042199, Rab35, Ccdc64, LOC665032
Downstream genePrkab1, LOC545798, Ccdc60, 4930562A09Rik, Hspb8, 1500001A10Rik, LOC433943, Gm1684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251M11.bB6Ng01-251M11.g
ACCGA058947GA058948
length9801,211
definitionB6Ng01-251M11.b B6Ng01-251M11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaggggggaaaaatggttagccggaagtgaagagagacgccaa
gagacaagagagacggtctctgctaagatcggttccaagaagctattagg
agttctcacaacacagtactttgactagatattcccccaaagaggaaaaa
caggcccaaagcacctgaaaagttgctagctgtcattaggctttaggaaa
aatgcaaattaaaaccacagcaaggtgccatgtggctaaaacggctagag
tcagaaatggaaaaccagggtcgaagcagaagcagagaaatggcattgtt
cacacatccctgggggagggggcatggaaagtggtaccttagggcccagg
aggacagttcctccaaaagctatagactatgaggtatacattattccaac
aatttccactcctagcttcatgcccaagaggacagaagctatacacccac
ccacatgaaaactacacatcactcacagtggctcggttcacagcagccaa
caagcagagacagctcaaacaccctctgcagcgtaacaggtaacatgcac
cgcccaggcaatgaaatattatttagccgtgtaaagaaaagaaaccagca
gggcagcgacacgctacagtgtgggtgaatcccacagaacgctgtgttct
ggaaaataagccagtcacagatgactgcgtggagtacgagcccatgtgtt
tgagagactaaggatgggagatccacagagagggaaagtagattagtggt
ccccagaggtggggagaaggagagatgcagactctctgcggacagacaca
ggggttgtccatagagtcctggctggtgtggaactcattcatttatgtag
accatgctggcgtgaactcactgtgattttgcctgtcccccaccctctgc
tcttcaagaattctgagactgaaggtgttgtccccactagccccagctct
acttatttgtaaacatttagtcatgaaaga
gaattcctaacatttcagtgattattaagttcttttatagtagaactgct
attaggttcttttctggtagtcaaaactgcaatgagaactatgccagtct
cccaagtgtcaccagttaattgcttttagagagtaaccagactttctcct
actcagagctcattctaagagattgtaaaacctttaaccaaaggtcataa
aaagggaactatgatttattataggtgctaggatagaagataaaatattg
actgggtttatctatacaaaatttcactaatgacttagttatggttttta
actcttcctgaatctatagagtagtggcaggtgatgaatgtttagccata
taattactcctttttttttctttttttaaaattaggtattttcttatttt
acatttcaaatgctatcccaaaagtccctcatacccttccctcccccact
cccctactccctcactcccacttcttggtcctggtgttcccctgtactga
ggcatataaagtttgcaagaccaaggggcctctattcccaatgatggcca
actaggccatcttctgctacatatgcagctagagacatgagctctggggg
tactggttagttcatattgttgttccacctatagggttgcagatctcttt
agctccttgggtacgttctctagctcctccattgggggccctgtgttcca
tccaatactgactgtgagcatccacttctgtgtttgccaggcatcagcat
agcctcacaagagacagctatatcagggtcctttcagcaaaatcttgctg
gcatatgcaatggagtctgcatttggaggctgattatgggatggatctcc
aggtgtggcagtctctagatggcccatccttttcgtctcagctccaaact
ttgtctctgtaactccttccatgggtgttttattccccaattctaagaaa
gtgcaaagttgcccacactttggtctttgttctctttgaagttcatggtg
ttttgcaatttgtatccttggggtttcccataataattactcctaaatgg
gatattgcatgcaaacaattctcagttgcaaactttcttatttgatttgg
tgatttttatttattggtgtaaacctccacaattgaacctttaacccatg
tgcaatcagtgttcctgcaagagtgtgtcgagtgcctgttaagtgaacaa
gagtgatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_116434191_116434805
seq2: B6Ng01-251M11.b_47_661 (reverse)

seq1  AGCGTGTCGCTGCCCTGCTGGTTTCTTTTCTTTACACGGCTAAATAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGTCGCTGCCCTGCTGGTTTCTTTTCTTTACACGGCTAAATAATAT  50

seq1  TTCATTGCCTGGGCGGTGCATGTTACCTGTTACGCTGCAGAGGGTGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCCTGGGCGGTGCATGTTACCTGTTACGCTGCAGAGGGTGTTTG  100

seq1  AGCTGTCTCTGCTTGTTGGCTGCTGTGAACCGAGCCACTGTGAGTGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCTGCTTGTTGGCTGCTGTGAACCGAGCCACTGTGAGTGATGT  150

seq1  GTAGTTTTCATGTGGGTGGGTGTATAGCTTCTGTCCTCTTGGGCATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTCATGTGGGTGGGTGTATAGCTTCTGTCCTCTTGGGCATGAAG  200

seq1  CTAGGAGTGGAAATTGTTGGAATAATGTATACCTCATAGTCTATAGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTGGAAATTGTTGGAATAATGTATACCTCATAGTCTATAGCTTT  250

seq1  TGGAGGAACTGTCCTCCTGGGCCCTAAGGTACCACTTTCCATGCCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAACTGTCCTCCTGGGCCCTAAGGTACCACTTTCCATGCCCCCTC  300

seq1  CCCCAGGGATGTGTGAACAATGCCATTTCTCTGCTTCTGCTTCGACCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGGATGTGTGAACAATGCCATTTCTCTGCTTCTGCTTCGACCCTG  350

seq1  GTTTTCCATTTCTGACTCTAGCCGTTTTAGCCACATGGCACCTTGCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCATTTCTGACTCTAGCCGTTTTAGCCACATGGCACCTTGCTGTG  400

seq1  GTTTTAATTTGCATTTTTCCTAAAGCCTAATGACAGCTAGCAACTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTTGCATTTTTCCTAAAGCCTAATGACAGCTAGCAACTTTTCA  450

seq1  GGTGCTTTGGGCCTGTTTTTCCTCTTTGGGGGAATATCTAGTCAAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTTGGGCCTGTTTTTCCTCTTTGGGGGAATATCTAGTCAAAGTAC  500

seq1  TGTGTTGTGAGAACTCCTAATAGCTTCTTGGAACCGATCTTAGCAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTGAGAACTCCTAATAGCTTCTTGGAACCGATCTTAGCAGAGAC  550

seq1  CGTCTCTCTTGTCTCTTGGCGTCTCTCTTCACTTCCGGCTAACCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTCTTGTCTCTTGGCGTCTCTCTTCACTTCCGGCTAACCATTTTT  600

seq1  CCCCCCTTAGAATTC  615
      |||||||||||||||
seq2  CCCCCCTTAGAATTC  615