BAC Information

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BAC

Clone NameB6Ng01-253K15
Chromosome5 (Build37)
Map Location 94,745,955 - 94,747,155
singlet/doubletsinglet
Overlap geneLOC624421
Upstream geneLOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042
Downstream geneAA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253K15.bB6Ng01-253K15.g
ACCGA060336GA060337
length1,1881,201
definitionB6Ng01-253K15.b B6Ng01-253K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatgcccttcctgaaggaccttttgcagcacacagccaactg
gagcaagatgaatgtggaacaataccctgcccctctggagtgctatgatg
aatttgctcaagtctctgtagaaagatttgcccaagtttgtcaggatctc
atggatacactgagagcaataaggcagcccaagaacagctcctttgctac
agatatctgccacacatgtggggagcgctgggtctttgaccaggtggcca
acctttgtcattgctggcagtaaaatgggaacattctggattggaataaa
aataaggtttggaactcatatcttataaaaaaaaattgtattttccatct
tcatttgtaataaaaagaacagaaaaaaaatctcactcagcctagtcatt
ataccccttttctgtaaactatcaataaaataatttgttactctgtattt
attgaaaacttagaacatgattactttgtttaaacatcattgttattgtc
tgaattgaataaagcatctaaattaaaagactacaacaatcaccctctgg
aaagaagtaaaaacgtacacattgaggccaggcatgtcacaattcacaat
cttgggaaagtggataaagttatcagctatggtgggaaatatatgaactt
ctaggctggcctaaagtacagaggaagaaaaaaaataaagaacataactc
tctcagactcgttctttctgtcttccctcacaccctttctccctgtctga
atgtccaattccctgaccttgttccttaagaccagtgaactcacctgata
ttttcccacaattaacatgctttcatattcttaaaacaaacaacatgtag
atttagagagactcttcaccggtgaagagcacatgctgctttgcagaaaa
cgaaagttctgtttcagagctaataaccaggtggctgtcaaatggaactc
aagcttcagtgctaggaccctcctttctgtcctctgtggatcccaccttt
cacatgcacaaatccacataatacacatgtagctattccaccagctgaag
aagtctttataaaaaaggactcaagttcaccaggaataaaaatggccata
taaaatggtggatgtgtcaatagccactggtgtcctctgggaaggacatg
tggagttaaggcatatcttgagagctccattgggtgag
gaattctttatatatatatattggatattagtcctctatctgatttagga
taggtaaagatcctttgccaatctgttgatggtctttttgtcttgttgat
ggtgtcttttgccttgcagaagctttgcaactttatgaggtcccatttat
tgattctcgatcttaacggcacaagctgttgctgttttttccggaacatt
tcccctgtacccatatctttgaggcttttctctactttctcctctataag
tttcagtgtctctggttttatgtggagttccttaatccacttagatttga
ccttagtataaggagataggaatggatcaattcacattcttctccatgat
aaccgccagttgtgccagcaccatttgttgaaaatgctgtcttttttcca
ctggatgcttttagctcccttgtcaaagatcaagtgaccataggtgtgtg
ggatcaggtgacagcagatgctggcgaggatatggataaagaggaacact
cctccaaggttggtgggatttcaagcttgaacaaccactctggaaatcag
tctggcagtttctcagaaaactggatatagtactaccggaggatcctgca
atacctctcttgggcatatatccagaagatgttccaaccggtaagaagga
cacatgctccactatgttcatagcagccttatttattatagccagaagct
ggaaagaacccagatgtcccttaacagaggaatggatacagaaaatgtgg
cacatttacacaatggagtactactccgctattaaaaagaatgaatttat
gaaattcctaggcaaaatggatgtacctggagggcatcatattgaatgag
gtaacccaataacaaaggaactcacacaatatgtactcactgataagagg
atataagcccagaaacttagggatacccaggatataagaatacaatttgc
tagacgcatgaaactcaagaagaacggagactaaagtgtggaaacttttg
ctccttctaagaatggggaacaatacacccatgggaagggagttaacaga
gacaagtttgggaggcttgtgaggaacggaatgggacatcttaagagcct
tgcataatccacgtcaatcccatatcggccttccacgctggactcattgc
atatactagacaggatcttgggcctgaaggaacctcacgaaaatatatag
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94745955_94747155
seq2: B6Ng01-253K15.b_42_1229

seq1  GAATTCTCCATGCCCTTCCTGAAGGACCTTTTGCAGCACACAGCCAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGCCCTTCCTGAAGGACCTTTTGCAGCACACAGCCAACTG  50

seq1  GAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGGAGTGCTATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGGAGTGCTATGATG  100

seq1  AATTTGCTCAAGTCTCTGTAGAAAGATTTGCCCAAGTTTGTCAGGATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTCAAGTCTCTGTAGAAAGATTTGCCCAAGTTTGTCAGGATCTC  150

seq1  ATGGATACACTGAGAGCAATAAGGCAGCCCAAGAACAGCTCCTTTGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACACTGAGAGCAATAAGGCAGCCCAAGAACAGCTCCTTTGCTAC  200

seq1  AGATATCTGCCACACATGTGGGGAGCGCTGGGTCTTTGACCAGGTGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGCCACACATGTGGGGAGCGCTGGGTCTTTGACCAGGTGGCCA  250

seq1  ACCTTTGTCATTGCTGGCAGTAAAATGGGAACATTCTGGATTGGAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGTCATTGCTGGCAGTAAAATGGGAACATTCTGGATTGGAATAAA  300

seq1  AATAAGGTTTGGAACTCATATCTTATAAAAAAAAATTGTATTTTCCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTTTGGAACTCATATCTTATAAAAAAAAATTGTATTTTCCATCT  350

seq1  TCATTTGTAATAAAAAGAACAGAAAAAAAATCTCACTCAGCCTAGTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTAATAAAAAGAACAGAAAAAAAATCTCACTCAGCCTAGTCATT  400

seq1  ATACCCCTTTTCTGTAAACTATCAATAAAATAATTTGTTACTCTGTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCTTTTCTGTAAACTATCAATAAAATAATTTGTTACTCTGTATTT  450

seq1  ATTGAAAACTTAGAACATGATTACTTTGTTTAAACATCATTGTTATTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAACTTAGAACATGATTACTTTGTTTAAACATCATTGTTATTGTC  500

seq1  TGAATTGAATAAAGCATCTAAATTAAAAGACTACAACAATCACCCTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGAATAAAGCATCTAAATTAAAAGACTACAACAATCACCCTCTGG  550

seq1  AAAGAAGTAAAAACGTACACATTGAGGCCAGGCATGTCACAATTCACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTAAAAACGTACACATTGAGGCCAGGCATGTCACAATTCACAAT  600

seq1  CTTGGGAAAGTGGATAAAGTTATCAGCTATGGTGGGAAATATATGAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAAGTGGATAAAGTTATCAGCTATGGTGGGAAATATATGAACTT  650

seq1  CTAGGCTGGCCTAAAGTACAGAGGAAGAAAAAAAATAAAGAACATAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTGGCCTAAAGTACAGAGGAAGAAAAAAAATAAAGAACATAACTC  700

seq1  TCTCAGACTCGTTCTTTCTGTCTTCCCTCACACCCTTTCTCCCTGTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACTCGTTCTTTCTGTCTTCCCTCACACCCTTTCTCCCTGTCTGA  750

seq1  ATGTCCAATTCCCTGACCTTGTTCCTTAAGACCAGTGAACTCACCTGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAATTCCCTGACCTTGTTCCTTAAGACCAGTGAACTCACCTGATA  800

seq1  TTTTCCCACAATTAACATGCTTTCATATTCTTAAAACAAACAACATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCACAATTAACATGCTTTCATATTCTTAAAACAAACAACATGTAG  850

seq1  ATTTAGAGAGACTCTTCACCGGTGAAGAGCACATGCTGCTTTTGCAGAAA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTAGAGAGACTCTTCACCGGTGAAGAGCACATGCTGC-TTTGCAGAAA  899

seq1  ACGAAAGTTCTGTTTCAGAGCTAATAACCAGGTGGCTGTCAAATGGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAGTTCTGTTTCAGAGCTAATAACCAGGTGGCTGTCAAATGGAACT  949

seq1  CAAGCTTCAGGTGCTAGGACCCTCCTTTCTGTCCTCTGTGGATCCCACCT  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTCA-GTGCTAGGACCCTCCTTTCTGTCCTCTGTGGATCCCACCT  998

seq1  TTCACATGCACAAATCCACATAATACACATGTAGCTATTCCACCAGCTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCACAAATCCACATAATACACATGTAGCTATTCCACCAGCTGA  1048

seq1  AGAAGTCTTTAAATAAAAAAAGGACTCAATTTCACAAGGGAATAAAAAAT  1100
      |||||||||||    |||||||||||||| ||||| | ||||| ||||||
seq2  AGAAGTCTTTA---TAAAAAAGGACTCAAGTTCACCA-GGAAT-AAAAAT  1093

seq1  GGCCCAATTAATTAAAATGGT-GATGTTGTTCATTAG-CACTTGTGT-CT  1147
      ||||     |  ||||||||| |||||   ||| ||| |||| |||| ||
seq2  GGCC-----ATATAAAATGGTGGATGT--GTCAATAGCCACTGGTGTCCT  1136

seq1  CTGTGAAGGGAGCATGTGGAGTTTTAGGCATATCCTTTGAGCTCCATT-G  1196
      ||| |||||   ||||||||| || ||||||||| |  |||||||||| |
seq2  CTGGGAAGG--ACATGTGGAG-TTAAGGCATATCTTGAGAGCTCCATTGG  1183

seq1  GTGAG  1201
      |||||
seq2  GTGAG  1188