BAC Information

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BAC

Clone NameB6Ng01-257C14
Chromosome5 (Build37)
Map Location 79,964,451 - 80,121,235
singlet/doubletdoublet
Overlap genenone
Upstream geneEG384187
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257C14.bB6Ng01-257C14.g
ACCGA062930GA062931
length1,1841,096
definitionB6Ng01-257C14.b B6Ng01-257C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,120,037 - 80,121,235)(79,964,451 - 79,965,539)
sequence
gaattcctgctctgaaatccctcagtgataagctatgatttgacagtaca
agtaatatacatcctttcctccccaagttgcttctgggtttgctgttcta
tcataaccgtagcaacactaatatagctatgttgagaacaaagaccaaca
acagacatatcatgcgaataatgtacatacatctttgattgtaaataaaa
tgattgttcatgacttaggctggagagggaaggtgggggagcacccttat
agaagtaggataaggagggatgagataggagtctccaaaggggaaactgg
caaagaagatgacatttgaaatgtaaataaataaaatacccaatttaaaa
aaaaatagactacaagatgctatattattgggtttccaaaataaagccct
agaatgagtggcattttagtaaatatataagagacacgagagaactggga
agcctgacccctggcatattcatatctaaaatgtcaaagtcaaaagaaaa
aataacaagtgcactcaaggaaaagtgtttctggagtattagagaaactt
taggaacgcccatcagtcagtggtcaaaggaacagaaagcttatgtatac
cgtagatatgaccatgacttaaaaagtcactggacgtaaatcatcttgga
tcatagaaggctttttggctacaaatggaagcttctgagtggcttttgag
tagagattgacatggattttcttgtacagagacagtatcactgatgcttc
cctgtgacgaatagacagaagggagccacggtaaaatgacagagaagttg
atgcttccctgtgacgaatagacagaaagggagccacggtaaaataatga
cagagaagttgatgcttccctgtgacgaatagacagaaaggagccacggt
aaaatgacagagaagttggaaagcagaggcagtaatccagaaggagataa
agatggatcagctatctatcagagtagacaaataaacaataaatgactag
ctttgacactgaatcatcataagacttgatgatatcatttcaaaatttct
tttgcatctgatcagcaacgacagccatgtttggaaacaatcaatatttt
ctgaatctcttctgccttatctacggatgatagtccagacttaatttgtt
gccatgcagcaatgttttgaacacaccacattta

gaattctttgtttagctctgtacaccattttttaatagggttattttttt
ccctttgtctaacttctattttgatggattcttcggcctgaatgtgttcc
tgcttatttatttttcaaaatgaaactccgtaggtagcaggcttagaaag
atgattgaacatgagataatgaaaagtgttcgccctttaaaagaagcctc
aggaaacctcctcaccctgtgtaccatgttcctttgtccagagaagataa
tcctgaggacaacaaatggactttgagttttcagtctattgaactatgtg
aaaaacatttctttcttataaaaaacccacagtatttgataatttatttt
aagcgaatagatgcaattatattttagtcattatattcacatgtacttgt
atgtgaggttcatgtggatacacaaaggggcttggaggagacaatcaggc
tagtaaacttgaatgattaagattaaacaaagtgaatcttgccttctttg
tttaataatgacaaaactcactggtgctgatcattcaatgtcagattacc
tcttgctcttaaaactttaaagtaaggtaaatgtatacattgacctcatt
catgattgaagtgggaatttctggtttcactggagggctagttgtgtcac
gcgatgtttctctggaaacaatcttatgagaggatgcttggctgaagcag
acatgtgagtggagtttgggctgaagcacgaacctgggaagatgattggc
tgagaacagacatgtggtatttttctggaagctttcctggtgaaagggca
tgcaatattttcctggagcagatatttctgaggacatgtatagtttggac
agagtataagtacaactcaacagacagctgatgacactcttacactggtt
caccttgctttctttgctgaacttcatttggtggtgacttcatagagaga
aatgccaccaaagatcttctggtggtattctggctgcttccttgatactt
ccatgtactttttgtcaacttggtgtagcctcaggactcttctgggtcag
cctcctctactgattcataagtgtgtatttttgccagtggattgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_80120037_80121235
seq2: B6Ng01-257C14.b_45_1228 (reverse)

seq1  TAAATGT----TGTTCAAAACATTTGCTGCATGACAACAAAAATAAATCT  46
      |||||||    ||||||||||| |||||||||| |||| ||| ||| || 
seq2  TAAATGTGGTGTGTTCAAAACA-TTGCTGCATGGCAAC-AAATTAAGTC-  47

seq1  GTGGACTAAATCATCCTGTAGATAAGCAGGAAGAGATTTCAG-AAATATT  95
       ||||||  ||||||| |||||||||   ||||||| ||||| |||||||
seq2  -TGGACT--ATCATCC-GTAGATAAGGCAGAAGAGA-TTCAGAAAATATT  92

seq1  GGATTTGGTTTCAAACATGCCTGTCGGTTGCTGATCAGAATGCAAAAGGA  145
      |   ||| || |||||||| ||||| |||||||||||| |||||||| ||
seq2  G--ATTGTTTCCAAACATGGCTGTC-GTTGCTGATCAG-ATGCAAAA-GA  137

seq1  AATTTTGAAATGATATCAATCAAAGTCTTATTGATGATTCAGTTGTCAAA  195
      ||||||||||||||||| ||| |||||||| ||||||||||| |||||||
seq2  AATTTTGAAATGATATC-ATC-AAGTCTTA-TGATGATTCAG-TGTCAAA  183

seq1  GCTAGTCATTTATTTGTTTAATTTTGTCTACTCTGATAAGATAGCTGATC  245
      |||||||||||| |||||||  ||||||||||||||| ||||||||||||
seq2  GCTAGTCATTTA-TTGTTTA--TTTGTCTACTCTGAT-AGATAGCTGATC  229

seq1  CATCTTTATCTCCCTTCTGGATTACTGCCTCTGC-TTCCAACTTCTCTGT  294
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  CATCTTTATCT-CCTTCTGGATTACTGCCTCTGCTTTCCAACTTCTCTGT  278

seq1  CATTTTACCGTGGCTCCCTTCTGTCTATTCGTCACAGGGAAGCATCAACT  344
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATTTTACCGTGGCTCCTTTCTGTCTATTCGTCACAGGGAAGCATCAACT  328

seq1  TCTCTGTCATTATTTTACCGTGGCTCCC-TTCTGTCTATTCGTCACAGGG  393
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTCTGTCATTATTTTACCGTGGCTCCCTTTCTGTCTATTCGTCACAGGG  378

seq1  AAGCATCAACTTCTCTGTCATTTTACCGTGGCTCCCTTCTGTCTATTCGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCAACTTCTCTGTCATTTTACCGTGGCTCCCTTCTGTCTATTCGT  428

seq1  CACAGGGAAGCATCAGTGATACTGTCTCTGTACAAGAAAATCCATGTCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGAAGCATCAGTGATACTGTCTCTGTACAAGAAAATCCATGTCAA  478

seq1  TCTCTACTCAAAAGCCACTCAGAAGCTTCCATTTGTAGCCAAAAAGCCTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTCAAAAGCCACTCAGAAGCTTCCATTTGTAGCCAAAAAGCCTT  528

seq1  CTATGATCCAAGATGATTTACGTCCAGTGACTTTTTAAGTCATGGTCATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATCCAAGATGATTTACGTCCAGTGACTTTTTAAGTCATGGTCATA  578

seq1  TCTACGGTATACATAAGCTTTCTGTTCCTTTGACCACTGACTGATGGGCG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGGTATACATAAGCTTTCTGTTCCTTTGACCACTGACTGATGGGCG  628

seq1  TTCCTAAAGTTTCTCTAATACTCCAGAAACACTTTTCCTTGAGTGCACTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAGTTTCTCTAATACTCCAGAAACACTTTTCCTTGAGTGCACTT  678

seq1  GTTATTTTTTCTTTTGACTTTGACATTTTAGATATGAATATGCCAGGGGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTTCTTTTGACTTTGACATTTTAGATATGAATATGCCAGGGGT  728

seq1  CAGGCTTCCCAGTTCTCTCGTGTCTCTTATATATTTACTAAAATGCCACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCCCAGTTCTCTCGTGTCTCTTATATATTTACTAAAATGCCACT  778

seq1  CATTCTAGGGCTTTATTTTGGAAACCCAATAATATAGCATCTTGTAGTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGGGCTTTATTTTGGAAACCCAATAATATAGCATCTTGTAGTCT  828

seq1  ATTTTTTTTTAAATTGGGTATTTTATTTATTTACATTTCAAATGTCATCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTAAATTGGGTATTTTATTTATTTACATTTCAAATGTCATCT  878

seq1  TCTTTGCCAGTTTCCCCTTTGGAGACTCCTATCTCATCCCTCCTTATCCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCAGTTTCCCCTTTGGAGACTCCTATCTCATCCCTCCTTATCCT  928

seq1  ACTTCTATAAGGGTGCTCCCCCACCTTCCCTCTCCAGCCTAAGTCATGAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATAAGGGTGCTCCCCCACCTTCCCTCTCCAGCCTAAGTCATGAA  978

seq1  CAATCATTTTATTTACAATCAAAGATGTATGTACATTATTCGCATGATAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTTTATTTACAATCAAAGATGTATGTACATTATTCGCATGATAT  1028

seq1  GTCTGTTGTTGGTCTTTGTTCTCAACATAGCTATATTAGTGTTGCTACGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTGTTGGTCTTTGTTCTCAACATAGCTATATTAGTGTTGCTACGG  1078

seq1  TTATGATAGAACAGCAAACCCAGAAGCAACTTGGGGAGGAAAGGATGTAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATAGAACAGCAAACCCAGAAGCAACTTGGGGAGGAAAGGATGTAT  1128

seq1  ATTACTTGTACTGTCAAATCATAGCTTATCACTGAGGGATTTCAGAGCAG  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGTACTGTCAAATCATAGCTTATCACTGAGGGATTTCAGAGCAG  1178

seq1  GAATTC  1199
      ||||||
seq2  GAATTC  1184


seq1: chr5_79964451_79965539
seq2: B6Ng01-257C14.g_69_1164

seq1  GAATTCTTTGTTTAGCTCTGTACACCATTTTTTAATAGGGTTATTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACACCATTTTTTAATAGGGTTATTTTTTT  50

seq1  CCCTTTGTCTAACTTCTATTTTGATGGATTCTTCGGCCTGAATGTGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTCTAACTTCTATTTTGATGGATTCTTCGGCCTGAATGTGTTCC  100

seq1  TGCTTATTTATTTTTCAAAATGAAACTCCGTAGGTAGCAGGCTTAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTTATTTTTCAAAATGAAACTCCGTAGGTAGCAGGCTTAGAAAG  150

seq1  ATGATTGAACATGAGATAATGAAAAGTGTTCGCCCTTTAAAAGAAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGAACATGAGATAATGAAAAGTGTTCGCCCTTTAAAAGAAGCCTC  200

seq1  AGGAAACCTCCTCACCCTGTGTACCATGTTCCTTTGTCCAGAGAAGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCTCCTCACCCTGTGTACCATGTTCCTTTGTCCAGAGAAGATAA  250

seq1  TCCTGAGGACAACAAATGGACTTTGAGTTTTCAGTCTATTGAACTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGACAACAAATGGACTTTGAGTTTTCAGTCTATTGAACTATGTG  300

seq1  AAAAACATTTCTTTCTTATAAAAAACCCACAGTATTTGATAATTTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTTCTTTCTTATAAAAAACCCACAGTATTTGATAATTTATTTT  350

seq1  AAGCGAATAGATGCAATTATATTTTAGTCATTATATTCACATGTACTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGAATAGATGCAATTATATTTTAGTCATTATATTCACATGTACTTGT  400

seq1  ATGTGAGGTTCATGTGGATACACAAAGGGGCTTGGAGGAGACAATCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGTTCATGTGGATACACAAAGGGGCTTGGAGGAGACAATCAGGC  450

seq1  TAGTAAACTTGAATGATTAAGATTAAACAAAGTGAATCTTGCCTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAACTTGAATGATTAAGATTAAACAAAGTGAATCTTGCCTTCTTTG  500

seq1  TTTAATAATGACAAAACTCACTGGTGCTGATCATTCAATGTCAGATTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAATGACAAAACTCACTGGTGCTGATCATTCAATGTCAGATTACC  550

seq1  TCTTGCTCTTAAAACTTTAAAGTAAGGTAAATGTATACATTGACCTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTTAAAACTTTAAAGTAAGGTAAATGTATACATTGACCTCATT  600

seq1  CATGATTGAAGTGGGAATTTCTGGTTTCACTGGAGGGCTAGTTGTGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGAAGTGGGAATTTCTGGTTTCACTGGAGGGCTAGTTGTGTCAC  650

seq1  GCGATGTTTCTCTGGAAACAATCTTATGAGAGGATGCTTGGCTGAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGTTTCTCTGGAAACAATCTTATGAGAGGATGCTTGGCTGAAGCAG  700

seq1  ACATGTGAGTGGAGTTTGGGCTGAAGCACGAACCTGGGAAGATGATTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAGTGGAGTTTGGGCTGAAGCACGAACCTGGGAAGATGATTGGC  750

seq1  TGAGAACAGACATGTGGTATTTTTCTGGAAGC-TTCCTGGTGAAAGGGCA  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAGAACAGACATGTGGTATTTTTCTGGAAGCTTTCCTGGTGAAAGGGCA  800

seq1  TGCAATATTTTCCTGGAGCAGATATTTCTGAGGACATGTATAGTTTGGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTTTCCTGGAGCAGATATTTCTGAGGACATGTATAGTTTGGAC  850

seq1  AGAGTATAAGTACAACTCAACAGACAGCTGATGACACTCTTACACTGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATAAGTACAACTCAACAGACAGCTGATGACACTCTTACACTGGTT  900

seq1  CACCTTGCTTTCTTTGCTGAACTTCATTT-GTGGTGACTTCATAGAGAGA  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACCTTGCTTTCTTTGCTGAACTTCATTTGGTGGTGACTTCATAGAGAGA  950

seq1  AATG-CACCAAAGATCTTCTGGTGGTATTCTGGCTGCTT-CTTGATACTT  996
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATGCCACCAAAGATCTTCTGGTGGTATTCTGGCTGCTTCCTTGATACTT  1000

seq1  CCATGTAC-TTTTGTCAACTT-GTGTAGCCTCAGGACTCTTCTGGGTCAA  1044
      |||||||| |||||||||||| |||||||||||||||||||||||||| |
seq2  CCATGTACTTTTTGTCAACTTGGTGTAGCCTCAGGACTCTTCTGGGTC-A  1049

seq1  GCCTCTCCTACTGATTCATAAGTG-GTA--TTTGCCAGGTGGATTGTC  1089
      |||||  ||||||||||||||||| |||  ||||||| ||||||||||
seq2  GCCTCCTCTACTGATTCATAAGTGTGTATTTTTGCCA-GTGGATTGTC  1096


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