BAC Information

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BAC

Clone NameB6Ng01-257N02
Chromosome5 (Build37)
Map Location 57,849,641 - 57,850,166
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041335, LOC100041349, LOC666455
Downstream geneLOC625721, EG666465, Pcdh7, LOC100041385
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257N02.bB6Ng01-257N02.g
ACCGA063417GA063418
length1,0231,183
definitionB6Ng01-257N02.b B6Ng01-257N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtttgtataagccaatgtaattttcagggtaatactactgaac
atattgtttagagtgagactaattgcaagcaaccaaaaaaatcactattg
tcattctaggtcagactagaagctttgggaagttatgtgagcaacagttt
tagctaggatctatctcagagtgaatcaagttggtttcagtatctactgt
gaccatttccatagtaactgaaaatataatttgaatgatgctatgttaca
ggtggtagaatctccatattattcctctatcatatagaaaaataaaacat
tacagtaggataaaattaatggaagtcatttgaattacctaccttgagaa
tttataaataagaaataatacattattgctgaaggatgacttaaaagata
gagtgtgtgattcccagtgtatcctcattcactgttcctgtcttttttgt
gcaaaatactggtagatgttggagaataacagcagattattagcaatcaa
acctggctatgattgcaatcacatctattattactaggaattcaaggaaa
gtaaccatctacttagaacttctgcatagctattctcatacagaaaaccc
aattgtctccatagctgttaacatcaaacataagaagttattttctttag
tactcacaaaaaattatacatttacatagttatattaactgtctggccca
cgtcacaatttggtcacaaggaatgtgattgtcactggtttcaagggtga
cattaaaggtatccataatgcttgtgaatttatagtaattgaatcaaaaa
aatcaacaaaagactacatttgacctttgagtaagatgtttacagatatg
aatctaaaaatacagagacattcaaaccatgtggatctataagcatagca
tggagcttgtagggatatgccttctaatgtgatgggcatgtatttatttc
tgactcctcagttaactgaaaacataacacaacatcagatgaaacctatt
tgggtttgagcagcaaatccttt
gaattcatgctgaattagtgctcagtgtgagctgtctgggggctccggct
gcttataaacaatctaaatcagaattagactaatgagacaaagcaacact
gctgtggtaaacaataatccatgttagtcaggtagcaatcacaattatcc
ttgattttccaccccatttctccaaatgacatccctgaatatgactgtac
attgaagaaacagtttagaagatggactcagaaactttcattgaagaact
gaaggaatcaaaagtggccagcacttgctgaaggttgagaattgataaac
aattgagatttcagctaaattcctaatagagaagatgagattcttggtga
gtttttaaaaggagacaacaaattatacattacatgatataccagcagtt
aaatcttttaaaggagcaatggacagaaacataaaatctaatacaaaaat
ttattgttaattaacaaattttcatctgtattaaagtaatactccaacat
caacggggactttttttttttggagccgacatttaaaaccttagacagac
tagagttttctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttctttcttccttccttccttccttcctctctctctc
tctctttctctctctctctctctctttctttctttctttctttctttctt
tctttctttctttctttctacattagatgttttctttataatcatttcaa
atttcaaatgctataccctcccccaccctgctcccctccccacccactcc
cgcttctcggccctggcattgccctgtactgggcatataaagtttgtaat
accaagggacctctcttaccagtgatgaccgaataggccatcttctgcta
catatgcagctagagacatgagctctggggggtactgggttagttcatat
tgttgttccagctatagggtttgcagaccccttcagctccttggggtact
ttctctagccttcctccattggggggcctgtgttccatcttatagatgga
ctgtaaggagcatccacgtctgtatttgccaggcacttggaatagcctca
tactagaacaggctaattgccagggtctcaacttatcctggctgcatatg
catagtgtctctgggggggtgatggtctcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_57849641_57850166
seq2: B6Ng01-257N02.b_48_573

seq1  GAATTCTGTTTGTATAAGCCAATGTAATTTTCAGGGTAATACTACTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTGTATAAGCCAATGTAATTTTCAGGGTAATACTACTGAAC  50

seq1  ATATTGTTTAGAGTGAGACTAATTGCAAGCAACCAAAAAAATCACTATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTTAGAGTGAGACTAATTGCAAGCAACCAAAAAAATCACTATTG  100

seq1  TCATTCTAGGTCAGACTAGAAGCTTTGGGAAGTTATGTGAGCAACAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAGGTCAGACTAGAAGCTTTGGGAAGTTATGTGAGCAACAGTTT  150

seq1  TAGCTAGGATCTATCTCAGAGTGAATCAAGTTGGTTTCAGTATCTACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGGATCTATCTCAGAGTGAATCAAGTTGGTTTCAGTATCTACTGT  200

seq1  GACCATTTCCATAGTAACTGAAAATATAATTTGAATGATGCTATGTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTCCATAGTAACTGAAAATATAATTTGAATGATGCTATGTTACA  250

seq1  GGTGGTAGAATCTCCATATTATTCCTCTATCATATAGAAAAATAAAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGAATCTCCATATTATTCCTCTATCATATAGAAAAATAAAACAT  300

seq1  TACAGTAGGATAAAATTAATGGAAGTCATTTGAATTACCTACCTTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGGATAAAATTAATGGAAGTCATTTGAATTACCTACCTTGAGAA  350

seq1  TTTATAAATAAGAAATAATACATTATTGCTGAAGGATGACTTAAAAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATAAGAAATAATACATTATTGCTGAAGGATGACTTAAAAGATA  400

seq1  GAGTGTGTGATTCCCAGTGTATCCTCATTCACTGTTCCTGTCTTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGATTCCCAGTGTATCCTCATTCACTGTTCCTGTCTTTTTTGT  450

seq1  GCAAAATACTGGTAGATGTTGGAGAATAACAGCAGATTATTAGCAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATACTGGTAGATGTTGGAGAATAACAGCAGATTATTAGCAATCAA  500

seq1  ACCTGGCTATGATTGCAATCACATCT  526
      ||||||||||||||||||||||||||
seq2  ACCTGGCTATGATTGCAATCACATCT  526