BAC Information

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BAC

Clone NameB6Ng01-273H14
Chromosome5 (Build37)
Map Location 81,606,665 - 81,607,243
singlet/doubletsinglet
Overlap geneLphn3
Upstream geneLOC100039506, LOC100039384
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273H14.bB6Ng01-273H14.g
ACCGA075037GA075038
length1,162573
definitionB6Ng01-273H14.b B6Ng01-273H14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tgcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacatcagtcagaatggctaatgtcatcaaaaactcaggtgac
agcagatgctagcgaggatgtggagaaagaggaacacttctccattgttg
gtgggattgcaagcttgtacagccactctggaaatcagtctggcggttcc
tcagaaaattggacatagtactaccagaggatcccgcaatacctcttcta
ggcatatatccagaagatgtcccaaacggtaagaaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagaggaatggatacagaaaatgtggtatatttacaca
atggattactagtctgctattaaaaagaatgaatttaagaaattcttagg
caaatggatggacctggagggcatcatcctgagtgaggtaacccaatcac
aaaggaactcacacaatatttactcactgataagtggatattagcccaga
aactaggaaacccaagatataagatacaatttgctaaatgcatgaaactc
aagaggaaggaagaacaaagtgtggacactttgccccgtcttagaattgg
gcacaaaacacccatggaaggagttacagagacaaagtttggagctgaga
tgaaaggatggaccatctagagactgccatatccagggatccatcccata
atcagcttccaaacgctgacaccattgcatacactagcaagactttgctg
aaaggacccagatatagctgtctcttgtgagactatgccctgggcctggc
aaaacacagaggtgggtgctcacagtcagctattggatggaacacagggc
ccctatggagagctagagaaagtacccaaggagctgaagggatctgcaac
cttatgggtggaacaacattatgaactaactagtaccccggaagcttctt
gtgacctctagctgtattatgtaccaaaagatgggctctagctcgctatc
actgaggaggccattgggacctggcatactttattagtgctctcagttag
tggaacactcac

tttcaaaaggtaggggcccgctggaggaagtctcttgctgaggctcaaaa
gactttctttgcccctgtctctctgcttactggctgtctggaggtgaatg
tctttcctccattattcttccactgccatttagcatcacctaaaggacca
cgaaatggaagctaccagccatgaaccacttgaatgggactgtgaactaa
ataaatccttcttcattcaaagtattccccctcaggtacttatcccaaag
atgaaacattgattaatgaaatagtttttcccttcataaatattcatagc
tacatataaaaactgacacagaaagaaaatttcccatacttaaaaccata
ggaagtccaacagggtcaactgacccagagacctgggagtgccaagacta
agccaccaaccaaaaagcatacataagctggtctgtggcccccagcacat
gtgtagcagaggattgccttgtctggcctctgggagaggatgtgcctaat
caatcctgtagacacttgatgacccaaggaaagggaaatgcctgggtgta
ggatgggtaatgaggggtagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_81606665_81607243
seq2: B6Ng01-273H14.g_64_642 (reverse)

seq1  CCCCTACCCCTCATTACCCATCCTACACCCAGGCATTTCCCTTTCCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCCTCATTACCCATCCTACACCCAGGCATTTCCCTTTCCTTGG  50

seq1  GTCATCAAGTGTCTACAGGATTGATTAGGCACATCCTCTCCCAGAGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAAGTGTCTACAGGATTGATTAGGCACATCCTCTCCCAGAGGCCA  100

seq1  GACAAGGCAATCCTCTGCTACACATGTGCTGGGGGCCACAGACCAGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGCAATCCTCTGCTACACATGTGCTGGGGGCCACAGACCAGCTTA  150

seq1  TGTATGCTTTTTGGTTGGTGGCTTAGTCTTGGCACTCCCAGGTCTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTTTTTGGTTGGTGGCTTAGTCTTGGCACTCCCAGGTCTCTGGG  200

seq1  TCAGTTGACCCTGTTGGACTTCCTATGGTTTTAAGTATGGGAAATTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGACCCTGTTGGACTTCCTATGGTTTTAAGTATGGGAAATTTTCT  250

seq1  TTCTGTGTCAGTTTTTATATGTAGCTATGAATATTTATGAAGGGAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTCAGTTTTTATATGTAGCTATGAATATTTATGAAGGGAAAAAC  300

seq1  TATTTCATTAATCAATGTTTCATCTTTGGGATAAGTACCTGAGGGGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTAATCAATGTTTCATCTTTGGGATAAGTACCTGAGGGGGAAT  350

seq1  ACTTTGAATGAAGAAGGATTTATTTAGTTCACAGTCCCATTCAAGTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAATGAAGAAGGATTTATTTAGTTCACAGTCCCATTCAAGTGGTT  400

seq1  CATGGCTGGTAGCTTCCATTTCGTGGTCCTTTAGGTGATGCTAAATGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGGTAGCTTCCATTTCGTGGTCCTTTAGGTGATGCTAAATGGCA  450

seq1  GTGGAAGAATAATGGAGGAAAGACATTCACCTCCAGACAGCCAGTAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAATAATGGAGGAAAGACATTCACCTCCAGACAGCCAGTAAGCA  500

seq1  GAGAGACAGGGGCAAAGAAAGTCTTTTGAGCCTCAGCAAGAGACTTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGGGGCAAAGAAAGTCTTTTGAGCCTCAGCAAGAGACTTCCTC  550

seq1  CAGCGGGCCCCTACCTTTTGAAAGAATTC  579
      |||||||||||||||||||||||||||||
seq2  CAGCGGGCCCCTACCTTTTGAAAGAATTC  579


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