BAC Information

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BAC

Clone NameB6Ng01-278D10
Chromosome5 (Build37)
Map Location 78,134,796 - 78,135,384
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665107, LOC100039299, C530008M17Rik, A230062G08Rik, Ppat, LOC664998, Paics, Srp72, Arl9, 1700023E05Rik, Hod, Spink2, Rest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneLOC100039398, Mthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278D10.bB6Ng01-278D10.g
ACCGA078517GA078518
length5851,040
definitionB6Ng01-278D10.b B6Ng01-278D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taagattcataggatctgagttcacccagctttatgagttcttttctctg
ttggcaagttccttttcccccagggtgatggtggtcggatgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtctttactgtcata
gaacttgttctgtagacctgctggcctccaattcacattgatctgcctgt
ctctgcctttccaatgctgagattagaggtctgcaccaccagtgcttggc
taaagattacttttcaacaggtggcaggactatgtgaaaatccacaccca
cacaataaacttggattcatgatggacagcagatataaaagtgtacttaa
atgaatcttagttctaaaagtaagatctaaaattataaaatctctaggta
aagatttcttaggatagctgataaaggaacagtgtaaagtaataaagaag
aaatattaaaaaacgcaagagctttattcttttttgtatataataatgtc
atttttattttacaaagtttgtgcagcaagggctatggtttttctcttac
actgtttgcagctaggtaggccaaaaggaaggctt
gaattctcacctgaggaataccgaacggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaggcttgtacaaccactctggaaatccgtcgggcggttcctca
gaaaattggacatagtaataccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaaatggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaagtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagccgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctggtctcttgtgagactattgccggggactagcaa
acacagaagtggatgcctcacagtcagctaatggatggatcacagggctt
cccaatggaggagctacgtaaagtacccaaagaagctaatggatctgcca
tccttatcgtggaatcaacataataacatactagacctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78134796_78135384
seq2: B6Ng01-278D10.b_46_636

seq1  GAATTCTAAGATTCATAGGATCTGAGTTCACCCAGCTTTATGAGTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATTCATAGGATCTGAGTTCACCCAGCTTTATGAGTTCTTT  50

seq1  TCTCTGTTGGCAAGTTCCTTTTCCCCCAGGGTGATGGTGGTCGGATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTGGCAAGTTCCTTTTCCCCCAGGGTGATGGTGGTCGGATGTGT  100

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCTTTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCTTTACT  150

seq1  GTCATAGAACTTGTTCTGTAGACCTGCTGGCCTCCAATTCACATTGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGAACTTGTTCTGTAGACCTGCTGGCCTCCAATTCACATTGATCT  200

seq1  GCCTGTCTCTGCCTTTCCAATGCTGAGATTAGAGGTCTGCACCACCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTCTGCCTTTCCAATGCTGAGATTAGAGGTCTGCACCACCAGTG  250

seq1  CTTGGCTAAAGATTACTTTTCAACAGGTGGCAGGACTATGTGAAAATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAAAGATTACTTTTCAACAGGTGGCAGGACTATGTGAAAATCCA  300

seq1  CACCCACACAATAAACTTGGATTCATGATGGACAGCAGATATAAAAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACAATAAACTTGGATTCATGATGGACAGCAGATATAAAAGTGT  350

seq1  ACTTAAATGAATCTTAGTTCTAAAAGTAAGATCTAAAATTATAAAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATGAATCTTAGTTCTAAAAGTAAGATCTAAAATTATAAAATCTC  400

seq1  TAGGTAAAGATTTCTTAGGATAGCTGATAAAGGAACAGTGTAAAGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAGATTTCTTAGGATAGCTGATAAAGGAACAGTGTAAAGTAATA  450

seq1  AAGAAGAAATATTAAAAAACGCAAGAGCTTTATTCTTTTTTGTATATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAATATTAAAAAACGCAAGAGCTTTATTCTTTTTTGTATATAAT  500

seq1  AATGTCATTTTTA-TTTACAAAGTTTGTGCAGCAAGGGCTATGG-TTTTC  548
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  AATGTCATTTTTATTTTACAAAGTTTGTGCAGCAAGGGCTATGGTTTTTC  550

seq1  TCTTACACTGTTTGCAGCTAGGTAGGCCAAAAGGAAGGCTT  589
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACACTGTTTGCAGCTAGGTAGGCCAAAAGGAAGGCTT  591