BAC Information

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BAC

Clone NameB6Ng01-284A02
Chromosome5 (Build37)
Map Location 95,179,732 - 95,180,863
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153
Downstream geneLOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380, EG666203, EG666209
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A02.bB6Ng01-284A02.g
ACCGA082818GA082819
length1,129821
definitionB6Ng01-284A02.b B6Ng01-284A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaagaaattcagaatgaaactcctttatcatcttattagagt
ctgagaggaagacaggactgctgtaaatcccagaaaataccagatgagga
aggaaataatgagagagtcatgtctttagagttaggggcagcagtggagg
tctgcaaacataatagaaaatgcagatacggtctacagaagacaagggca
aaaagcctagaatatctcagctggcatgtttagaatttacacaggtatta
gagaaaggaagggtaaagactgcacttacaactttgagttagaacccagg
caacaggctggttcggcagtgaagatgactgagcaacaggtaggaggaaa
gtgtaagaacagcagcttattaaggggatgatcactcctcccatgtcctt
ggattatcctcaggtgaaccagctctcctgtgggatggtctacttggcca
agtgattaacaagtcaacttggattaactcctaagataaagggataatgc
aatgtaatgttctaatctttggtacatagtactgtgacaggtttctctca
tggtcagtggtcaaactcatatcctattctatgtccaagagaatgttgct
tccttttaataactgtcaagaaacccagttactctgcctgatccctagta
agaccagtgatacttgctgtgatgaaatacccacaaagaagcagtatatc
tggtaaaagaacttccttgtctcaaagttcaagggaatactgttcatcac
atcaaggaagacacagttgcaagagtgagaatgatcaggatgtgtgcaca
ggtaatgagccaagagtaggcaagggtcatagttaatttgtactctcttt
cttatcctgttatgacaccagcaaatggggtgttgacctcagactatgaa
atagcacctccacattcagactggagcatctgcccaaaacttcttttcac
aacaccatcaaggtattattttccttgatgagtctaaggacaccaatgtg
acaatgtttaaccattatgtaatgcttctcctgttgtgtttgattgtttt
gatttgacagtttgtctgtgtagctttggctgtgcttgactctgcaaact
tgttggcctacaatggctcaaagctcttt
gaattctctggtagaatattggggatcttttatctattcatatcatatga
tctgcgactagtgatgctttgaattcttcctttccaatttttatccccct
gagatcctttagtttttactctagctagaattttaagtaatatgttgagt
agataggaagagagtgggaagacttgtcttgtccctggttttacagagat
tgctttaaaattctctttttaatttgatgttgggtattgccttgttacat
attgcttatattatgttgacatatccaacttgtatcctgataactccaaa
attttaacataataggctgttaggttttgtcaaatgctttctcagaatcg
agtgaggtgatcatgtgatttttttttctttaagtttgtttttatggtgg
aatacattgatggattttccataaattgaactgtccttgcatccctggga
tgaagcctagttgattaaggtgggttgtgtctttgacatagtcttggatt
cagtttccaatatttttgcgtaaatattcataagggatgttagcctgaag
ttcttattttctgttgagactttgaataatttaggtatcagggagaccct
ggcctcagaatgagttgtcaatgttccttttgttttctattttgtggaat
aatttgaggattattggcataagctcttctttcataagtagagtaaagtt
ctgcaataaaaactgtctggcccctgagcatttttttttttttttttttg
ggagatgggctgttttttactgactactactatttctctggggggttata
gggaattaaacattaactggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95179732_95180863
seq2: B6Ng01-284A02.b_45_1173 (reverse)

seq1  AAAGAGCTCTGAG-CATTGTAGGCAAACCTGGTCTGCAGAGTTCAAGCAC  49
      |||||||| |||| |||||||||| || |  || ||||||| ||||||||
seq2  AAAGAGCTTTGAGCCATTGTAGGCCAA-CAAGTTTGCAGAG-TCAAGCAC  48

seq1  AGCCAAAGCTACACAGACAAACTGTCAAAATCCAAAAACAATCAAACAAC  99
      |||||||||||||||||||||||||| |||||  ||||||||||||| ||
seq2  AGCCAAAGCTACACAGACAAACTGTC-AAATC--AAAACAATCAAAC-AC  94

seq1  AACAGAAGAAGCATTTACATAATGGTT-AACATTGTCACATTGGTGTCCT  148
      ||||| ||||||| ||||||||||||| ||||||||||||||||||||| 
seq2  AACAGGAGAAGCA-TTACATAATGGTTAAACATTGTCACATTGGTGTCC-  142

seq1  TTAGACTCATCAAGGAAA--TATACC-TGATGGTGTTGTGAAAAGAAGTT  195
      ||||||||||||||||||   ||||| |||||||||||||||||||||||
seq2  TTAGACTCATCAAGGAAAATAATACCTTGATGGTGTTGTGAAAAGAAGTT  192

seq1  TTGGGCAGATGCTCCAGTCTGAATGTGGAGGTGCTATTTCATAGTCTGAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCAGATGCTCCAGTCTGAATGTGGAGGTGCTATTTCATAGTCTGAG  242

seq1  GTCAACACCCCATTTGCTGGTGTCATAACAGGATAAGAAAGAGAGTACAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACCCCATTTGCTGGTGTCATAACAGGATAAGAAAGAGAGTACAA  292

seq1  ATTAACTATGACCCTTGCCTACTCTTGGCTCATTACCTGTGCACACATCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTATGACCCTTGCCTACTCTTGGCTCATTACCTGTGCACACATCC  342

seq1  TGATCATTCTCACTCTTGCAACTGTGTCTTCCTTGATGTGATGAACAGTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTCTCACTCTTGCAACTGTGTCTTCCTTGATGTGATGAACAGTA  392

seq1  TTCCCTTGAACTTTGAGACAAGGAAGTTCTTTTACCAGATATACTGCTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGAACTTTGAGACAAGGAAGTTCTTTTACCAGATATACTGCTTC  442

seq1  TTTGTGGGTATTTCATCACAGCAAGTATCACTGGTCTTACTAGGGATCAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGTATTTCATCACAGCAAGTATCACTGGTCTTACTAGGGATCAG  492

seq1  GCAGAGTAACTGGGTTTCTTGACAGTTATTAAAAGGAAGCAACATTCTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAACTGGGTTTCTTGACAGTTATTAAAAGGAAGCAACATTCTCT  542

seq1  TGGACATAGAATAGGATATGAGTTTGACCACTGACCATGAGAGAAACCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGAATAGGATATGAGTTTGACCACTGACCATGAGAGAAACCTG  592

seq1  TCACAGTACTATGTACCAAAGATTAGAACATTACATTGCATTATCCCTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTACTATGTACCAAAGATTAGAACATTACATTGCATTATCCCTTT  642

seq1  ATCTTAGGAGTTAATCCAAGTTGACTTGTTAATCACTTGGCCAAGTAGAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGAGTTAATCCAAGTTGACTTGTTAATCACTTGGCCAAGTAGAC  692

seq1  CATCCCACAGGAGAGCTGGTTCACCTGAGGATAATCCAAGGACATGGGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACAGGAGAGCTGGTTCACCTGAGGATAATCCAAGGACATGGGAG  742

seq1  GAGTGATCATCCCCTTAATAAGCTGCTGTTCTTACACTTTCCTCCTACCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATCATCCCCTTAATAAGCTGCTGTTCTTACACTTTCCTCCTACCT  792

seq1  GTTGCTCAGTCATCTTCACTGCCGAACCAGCCTGTTGCCTGGGTTCTAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCAGTCATCTTCACTGCCGAACCAGCCTGTTGCCTGGGTTCTAAC  842

seq1  TCAAAGTTGTAAGTGCAGTCTTTACCCTTCCTTTCTCTAATACCTGTGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTTGTAAGTGCAGTCTTTACCCTTCCTTTCTCTAATACCTGTGTA  892

seq1  AATTCTAAACATGCCAGCTGAGATATTCTAGGCTTTTTGCCCTTGTCTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAACATGCCAGCTGAGATATTCTAGGCTTTTTGCCCTTGTCTTC  942

seq1  TGTAGACCGTATCTGCATTTTCTATTATGTTTGCAGACCTCCACTGCTGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCGTATCTGCATTTTCTATTATGTTTGCAGACCTCCACTGCTGC  992

seq1  CCCTAACTCTAAAGACATGACTCTCTCATTATTTCCTTCCTCATCTGGTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACTCTAAAGACATGACTCTCTCATTATTTCCTTCCTCATCTGGTA  1042

seq1  TTTTCTGGGATTTACAGCAGTCCTGTCTTCCTCTCAGACTCTAATAAGAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGGATTTACAGCAGTCCTGTCTTCCTCTCAGACTCTAATAAGAT  1092

seq1  GATAAAGGAGTTTCATTCTGAATTTCTTCATGAATTC  1132
      |||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGAGTTTCATTCTGAATTTCTTCATGAATTC  1129