BAC Information

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BAC

Clone NameB6Ng01-290B17
Chromosome5 (Build37)
Map Location 59,355,506 - 59,356,628
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396
Downstream geneLOC666499, EG625870, LOC100041425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290B17.bB6Ng01-290B17.g
ACCGA087330GA087331
length1,125684
definitionB6Ng01-290B17.b B6Ng01-290B17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttctctacagagttatttcggggcttgaaataatgatctat
tgacaaagatcagaaaagaatactctagtgattctaaaatgaattgtgtt
caattttactgtaagaaggaaagaattgcatcaaaattaatttattatgg
aaaaaatagcaaaattttagttgaactgaacatttcaaaaatgtgaatca
catgattctgaagtatattttcattctttaaacattccgcatagtcagat
tagtaatcagaggcagaacttgatggcttgctattatctcaatgccagca
tattttagatacagtttctctttttgacaagggtgtaaactaatttaggc
aagtgctgcttttatagcattcaaaagaatattgggcaaaggtgggaagc
aaagggggtcaatggagataatgaacttaacaggcagcagctacagtcag
cttcttgccataggtggcgggtacctaactttgcttatttccttactgct
tatttatttatgacatacttatagacaggatctcatgcatcctagtccgg
catacatgtctccacagctcctggcgttatgatatgaggcattgccactg
gcttattggaaattggactgagagtgttttgcgtgctaaataaacactgt
atctaatgatgtatagacccagcctaaaatctacaaattagggggtatct
ctctctgtctgtctctgtctctgtctctgtctctgtctctctttctctct
ctctctctggtcttagagaaatatttaggaaaataaatcaagagaataat
caattttaaaaatatgccagatggaccatttctaagaaaaaagttttaaa
catagcactattacctacctttctttaaaaaaaaatcaaaaataatgcat
ttaccattaattaatgttagtaatcctaattaatattctacgtattaagt
ttactactaacttcagtatggaatgtccccaggatataagacattttctg
atcttttttttggctgtaaataaaatatgaacacaaagaatcaaagtaaa
attgggtcttgttagatttcctttgagaatgtaaaaaagactcaattttt
gcttacaaagaagtggaagtgaaat

gaattctgtatgtttttattttgttttgttttgatttttttctggctaat
tttcacttattagtgaggacacaccattcatgtcattttgggtctgagtt
acctcactcagagtgatattttctagttccatccattggcctgcaaaact
caggatgccctcattattaatagctgaatagtattccattgtgtaaatga
accacattttctgtatttattcttctgtcctgggacatctaggttgtttc
tagcttctggccatcacaaacaataccaccaggaacgtagtgaaacatgt
tcccctgtggtattgtgaggcatctttcatgactcccctctgaaagaccc
aacaagcagctgaaagagacagatgcagatatttgcacctaacgggacag
aagcagctgtacacctgttgttgaattaaggaaggctgaaagaagctgag
gagaagggcaatcctgtaggaggaccagcattctcaattaatctggaccc
ctgagatctctcaaacactggaccaccaaacagacagcatacagcagctg
atatgaggcccccaacatacatacagtagaagaattccgggtctgtaatc
attcagagatgatgcacctaacccccaagagactggaggccccagggagt
tgagaggtcaggtgaggtaggggggtgggatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59355506_59356628
seq2: B6Ng01-290B17.b_45_1169 (reverse)

seq1  ATTTCACTT-CACTTCTATGGTAGCAAAAATTGAGTC-TTTTTACATTCT  48
      ||||||||| ||||||| ||  ||||||||||||||| ||||||||||| 
seq2  ATTTCACTTCCACTTCTTTGTAAGCAAAAATTGAGTCTTTTTTACATTC-  49

seq1  TCAAAGGAATTCTAAC-AGACCCATTTTTTACTTTGATTCTTTGTGTTCA  97
      ||||||||| |||||| |||||||  ||||||||||||||||||||||||
seq2  TCAAAGGAAATCTAACAAGACCCA-ATTTTACTTTGATTCTTTGTGTTCA  98

seq1  TATTTTATTTTACAGCC--AAAAAAGATCAGAAATTGTCTTATATCCTGG  145
      ||||||| |||||||||  ||||||||||||||| |||||||||||||||
seq2  TATTTTA-TTTACAGCCAAAAAAAAGATCAGAAAATGTCTTATATCCTGG  147

seq1  GGACATTCCATACTGAAGTTAGTAGTAAACTTAATACGTAGAATATTAAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCCATACTGAAGTTAGTAGTAAACTTAATACGTAGAATATTAAT  197

seq1  TAGGATTACTAACATTAATTAATGGTAAATGCATTATTTTTGATTTTTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTACTAACATTAATTAATGGTAAATGCATTATTTTTGATTTTTTT  247

seq1  TTAAAGAAAGGTAGGTAATAGTGCTATGTTTAAAACTTTTTTCTTAGAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAGGTAGGTAATAGTGCTATGTTTAAAACTTTTTTCTTAGAAA  297

seq1  TGGTCCATCTGGCATATTTTTAAAATTGATTATTCTCTTGATTTATTTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCATCTGGCATATTTTTAAAATTGATTATTCTCTTGATTTATTTTC  347

seq1  CTAAATATTTCTCTAAGACCAGAGAGAGAGAGAGAAAGAGAGACAGAGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTTCTCTAAGACCAGAGAGAGAGAGAGAAAGAGAGACAGAGAC  397

seq1  AGAGACAGAGACAGAGACAGACAGAGAGAGATACCCCCTAATTTGTAGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGACAGAGACAGACAGAGAGAGATACCCCCTAATTTGTAGAT  447

seq1  TTTAGGCTGGGTCTATACATCATTAGATACAGTGTTTATTTAGCACGCAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTGGGTCTATACATCATTAGATACAGTGTTTATTTAGCACGCAA  497

seq1  AACACTCTCAGTCCAATTTCCAATAAGCCAGTGGCAATGCCTCATATCAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTCAGTCCAATTTCCAATAAGCCAGTGGCAATGCCTCATATCAT  547

seq1  AACGCCAGGAGCTGTGGAGACATGTATGCCGGACTAGGATGCATGAGATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCAGGAGCTGTGGAGACATGTATGCCGGACTAGGATGCATGAGATC  597

seq1  CTGTCTATAAGTATGTCATAAATAAATAAGCAGTAAGGAAATAAGCAAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATAAGTATGTCATAAATAAATAAGCAGTAAGGAAATAAGCAAAG  647

seq1  TTAGGTACCCGCCACCTATGGCAAGAAGCTGACTGTAGCTGCTGCCTGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTACCCGCCACCTATGGCAAGAAGCTGACTGTAGCTGCTGCCTGTT  697

seq1  AAGTTCATTATCTCCATTGACCCCCTTTGCTTCCCACCTTTGCCCAATAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATTATCTCCATTGACCCCCTTTGCTTCCCACCTTTGCCCAATAT  747

seq1  TCTTTTGAATGCTATAAAAGCAGCACTTGCCTAAATTAGTTTACACCCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAATGCTATAAAAGCAGCACTTGCCTAAATTAGTTTACACCCTT  797

seq1  GTCAAAAAGAGAAACTGTATCTAAAATATGCTGGCATTGAGATAATAGCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAAGAGAAACTGTATCTAAAATATGCTGGCATTGAGATAATAGCA  847

seq1  AGCCATCAAGTTCTGCCTCTGATTACTAATCTGACTATGCGGAATGTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCAAGTTCTGCCTCTGATTACTAATCTGACTATGCGGAATGTTTA  897

seq1  AAGAATGAAAATATACTTCAGAATCATGTGATTCACATTTTTGAAATGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAAATATACTTCAGAATCATGTGATTCACATTTTTGAAATGTT  947

seq1  CAGTTCAACTAAAATTTTGCTATTTTTTCCATAATAAATTAATTTTGATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAACTAAAATTTTGCTATTTTTTCCATAATAAATTAATTTTGATG  997

seq1  CAATTCTTTCCTTCTTACAGTAAAATTGAACACAATTCATTTTAGAATCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTTCCTTCTTACAGTAAAATTGAACACAATTCATTTTAGAATCA  1047

seq1  CTAGAGTATTCTTTTCTGATCTTTGTCAATAGATCATTATTTCAAGCCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTATTCTTTTCTGATCTTTGTCAATAGATCATTATTTCAAGCCCC  1097

seq1  GAAATAACTCTGTAGAGAAATGGAATTC  1123
      ||||||||||||||||||||||||||||
seq2  GAAATAACTCTGTAGAGAAATGGAATTC  1125


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