BAC Information

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BAC

Clone NameB6Ng01-307N11
Chromosome5 (Build37)
Map Location 112,467,203 - 112,468,276
singlet/doubletsinglet
Overlap genenone
Upstream geneTtc28, Pitpnb, Mn1
Downstream geneA230057G18Rik, Cryba4, Crybb1, Tpst2, Tfip11, 2810002G02Rik, Hps4, EG625424, Asphd2, Sez6l, EG625464, Myo18b, Adrbk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307N11.bB6Ng01-307N11.g
ACCGA100505GA100506
length1,2001,078
definitionB6Ng01-307N11.b B6Ng01-307N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctgggctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaacggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacatttcattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgcaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgaccaaggacgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaggccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtatttacaaccttgttatt
gtttcatatgaacatgagatattatttgtgtcaagttgacaggggtggga
ttgtagtggctattcctggttgtcaacttgacaatatttgggaatgacta
caattcggaatttggaaagctcaccagtgacccttattcttggatgcctt
gagatcttatctggatctttgttttgagatcctttgagcatagtgggcct
tatggatttcagaagattggatctcggagttaaggaccaccttaatctgg
cctattgccgttcatctttgcgaatatatatgcagtgtcctgcaggctac

gaattcatagtcagaaacatagcaagactctgggctctgaaacaaaagga
ggggaaaggagggatggaaagaaaaagaggctaaagagaagggggagggt
cctggagagatggttcagcggtgaagagcactgactgcacttccagaggt
cctgagttcaattctcagcaaccacaggttggctcacgaccatctgggat
ggaatccgatgccctcttctggtgtgtcagaagacagttacagtctgctc
atagaaataaaataaataataaatcagagggggcgggaatcacccactgt
cccattttacaggaagaaggactgaggctcatatggtttcccatacatac
agagcaagcttcgagtagggagatccacccaaggatagtttggccccagc
caatgtggagggatgagttggtagtcactggtcttacagtcctgagcagg
gcctctgtgctgccaccctgtcccctgcccctcccggatcctccttgagg
tttaaactcaaacaggaaagcatgaataatgtagcctcctcgtggggtcc
tccgcggtgatggaagccctcgcctgccccattagccctcctctaactat
ttgatttcagtggctgagttcaatactaggcttccgtcggaaccttcata
cctatttgccacacccgagtcaacactgagtttccagaagccacttgaat
tttaacagagtcatctgcacagccccttcctctgcaaactcagggtgggg
gtgactttggaaggccccagaagctggcaagatcctttccacgaaacact
taacactttctttgtaacatcaggctagggatgaggagactctggaatct
ttaagccatagtgttcaaaccctttcttggcctcaacctggctgtgtgac
tttgccattctgggccttcggtttctcatctttaaattgggggaggggtg
cacagaagagtcacggaatgggagtgagatgaggttgatcctcctttgtt
gtaggtaatttcttgcaaatactttagggtcttcacacccaaaggtcttg
cattccaattaacttagatcaatcccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_112467203_112468276
seq2: B6Ng01-307N11.g_69_1146

seq1  GAATTCATAGTCAGAAACATAGCAAGACTCTGGGCTCTGAAACAAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTCAGAAACATAGCAAGACTCTGGGCTCTGAAACAAAAGGA  50

seq1  GGGGAAAGGAGGGATGGAAAGAAAAAGAGGCTAAAGAGAAGGGGGAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGGAGGGATGGAAAGAAAAAGAGGCTAAAGAGAAGGGGGAGGGT  100

seq1  CCTGGAGAGATGGTTCAGCGGTGAAGAGCACTGACTGCACTTCCAGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAGATGGTTCAGCGGTGAAGAGCACTGACTGCACTTCCAGAGGT  150

seq1  CCTGAGTTCAATTCTCAGCAACCACAGGTTGGCTCACGACCATCTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTCAATTCTCAGCAACCACAGGTTGGCTCACGACCATCTGGGAT  200

seq1  GGAATCCGATGCCCTCTTCTGGTGTGTCAGAAGACAGTTACAGTCTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCGATGCCCTCTTCTGGTGTGTCAGAAGACAGTTACAGTCTGCTC  250

seq1  ATAGAAATAAAATAAATAATAAATCAGAGGGGGCGGGAATCACCCACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAAAATAAATAATAAATCAGAGGGGGCGGGAATCACCCACTGT  300

seq1  CCCATTTTACAGGAAGAAGGACTGAGGCTCATATGGTTTCCCATACATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTACAGGAAGAAGGACTGAGGCTCATATGGTTTCCCATACATAC  350

seq1  AGAGCAAGCTTCGAGTAGGGAGATCCACCCAAGGATAGTTTGGCCCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGCTTCGAGTAGGGAGATCCACCCAAGGATAGTTTGGCCCCAGC  400

seq1  CAATGTGGAGGGATGAGTTGGTAGTCACTGGTCTTACAGTCCTGAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGGAGGGATGAGTTGGTAGTCACTGGTCTTACAGTCCTGAGCAGG  450

seq1  GCCTCTGTGCTGCCACCCTGTCCCCTGCCCCTCCCGGATCCTCCTTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGCTGCCACCCTGTCCCCTGCCCCTCCCGGATCCTCCTTGAGG  500

seq1  TTTAAACTCAAACAGGAAAGCATGAATAATGTAGCCTCCTCGTGGGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCAAACAGGAAAGCATGAATAATGTAGCCTCCTCGTGGGGTCC  550

seq1  TCCGCGGTGATGGAAGCCCTCGCCTGCCCCATTAGCCCTCCTCTAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCGGTGATGGAAGCCCTCGCCTGCCCCATTAGCCCTCCTCTAACTAT  600

seq1  TTGATTTCAGTGGCTGAGTTCAATACTAGGCTTCCGTCGGAACCTTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCAGTGGCTGAGTTCAATACTAGGCTTCCGTCGGAACCTTCATA  650

seq1  CCTATTTGCCACACCCGAGTCAACACTGAGTTTCCAGAAGCCACTTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTGCCACACCCGAGTCAACACTGAGTTTCCAGAAGCCACTTGAAT  700

seq1  TTTAACAGAGTCATCTGCACAGCCCCTTCCTCTGCAAACTCAGGGTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGAGTCATCTGCACAGCCCCTTCCTCTGCAAACTCAGGGTGGGG  750

seq1  GTGACTTTGGAAGGCCCCAGAAGCTGGCAAGATCCTTTCCACGAAACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTGGAAGGCCCCAGAAGCTGGCAAGATCCTTTCCACGAAACACT  800

seq1  TAACACTTTCTTTGTAACATCAGGCTAGGGATGAGGAGACTCTGGAATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAACACTTTCTTTGTAACATCAGGCTAGGGATGAGGAGACTCTGGAATCT  850

seq1  TTAAGCCATAGTGTTCAAACCC-TTCTTGGCCTCAACCTGGCTGTGTGAC  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTAAGCCATAGTGTTCAAACCCTTTCTTGGCCTCAACCTGGCTGTGTGAC  900

seq1  TTTGCCATTCTGGGCCTCGGTTTTCTCATCTTTAAAATGGGGGAGGGGTG  949
      |||||||||||||||||  | ||||||||||||||| |||||||||||||
seq2  TTTGCCATTCTGGGCCTTCGGTTTCTCATCTTTAAATTGGGGGAGGGGTG  950

seq1  CACAGAAGAGTCACGGAA-GGGAGTGAGATGAGG-TGATCCTCCTTGTTT  997
      |||||||||||||||||| ||||||||||||||| |||||||||||  ||
seq2  CACAGAAGAGTCACGGAATGGGAGTGAGATGAGGTTGATCCTCCTTTGTT  1000

seq1  GTAGGTAA-TTCTTGGAAATACTTTAGGGTCCTCACA-CCAAAGGTCTTG  1045
      |||||||| |||||| ||||||||||||||| ||||| ||||||||||||
seq2  GTAGGTAATTTCTTGCAAATACTTTAGGGTCTTCACACCCAAAGGTCTTG  1050

seq1  CCATCCCATTATACTTAGATCAATCCCAT  1074
      |  ||| |||| |||||||||||||||||
seq2  CATTCCAATTA-ACTTAGATCAATCCCAT  1078