BAC Information

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BAC

Clone NameB6Ng01-308O09
Chromosome5 (Build37)
Map Location 8,041,405 - 8,042,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042651, 4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4
Downstream geneSri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308O09.bB6Ng01-308O09.g
ACCGA101277GA101278
length1,1661,069
definitionB6Ng01-308O09.b B6Ng01-308O09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctatgaaccacatttttaatggggttatttgattt
ccaggagtccaccttcttgagttctttataaatattggatagtagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaactttat
gaggtcccatttatcgattctccatctttcagcacaagccattgctgttc
tattcaggaatttttcacctgtacccatatcttcgaggcttttccctatt
ttctcctctataagtttcagtgtctctggctttatgtggagttccttaat
ccacatagatttgaccttagtacaaggagatagtaatggatcaattcgca
atcttctacatgataacagccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagtg
atcataggtgtgtgggttcatctctgggtcttcaattctatttcattggt
ctacttctctgtcgctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaagacaggcatgatgattccaccagaggtactttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctgccaattgccctttctaattcgttgaagaattgagttggaatttga
tgggaattgcagtgaatctgtagattgcttttggcaagatagccattttt
actatattgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagactttaagttcttattataca
gatctttcacttccttagttagagtcacaccaacgtattttatattattt
gtgactatgagaaggtatgtctccctaatttctttctcagcctgttatct
tgtgtagaagaaggcaattgactttttgagtatttattatcagctacctc
catgaggtgtttatcagctaggagttctctattggattttagggtcactt
taattactatcatcactcgcaaagaattgactctcgatcatgattcctgg
aatctttgtggtgtca
gaattcaatacgctaaagccatcaaaatggtgtgcactaattataattga
gaaagaaagccagacctgatggtgcagctccttaaaggtttgaggcagga
gggttgtaagtccaaagccggcctgagctatacagccattctgaggagtt
tgtgattgcccacctcaacatataaaagataaagggagctggatacaaac
ctcagaagtacagcatctagtcagcaagcacaaggggcctgagctcaatc
tccagcacagcaaaaaagaagagaaagaaagaagatgatggtcactaaga
tagataaaaagtaagttacaaagcaacacgctcatatatggtttttattc
acaatgtgaagctgaaataaatctttccaaagcagcctccatagctgaat
aataaagtgcactccaagcaaatactgcacatagtggactatatcccggc
ttaaaaaatgttcacagctgagtagcttatccagtcacaggtcgccacct
gatcagaccatgtccttatccagcaaacactgacccagtcaatgaagtca
cttctgcatggtacttactgacatgtagtgaggaggggccttctggattg
tctttggtctggaatgttgcccagtgcaagagcattttctattcattaac
tttgttcaatttatctggcctgggcttttatcaataggaagcagcctaag
gggataaaagtcaaaataataacaatggttttctctagataataggtaat
ttttctttttccgttttacctacattttataaatttagtacactttaagc
tttcttatgcttatttataagtcatagcatgtaaaatagttacattttaa
accaaatgacttctaacaactagaattggtcttttgtatcttacggttaa
ccatttaattgaggcataatcatgattttagatttcagagctttttaaaa
agggctgttctgtaagcaatacgttctacatcacagagtatggaagcaac
actctaagtcatgtgacagaaagaagcaagtgcagtgaggacctaaacca
tacccctccacaccatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8041405_8042480
seq2: B6Ng01-308O09.g_68_1136

seq1  GAATTCAATACGCTAAAGCCATCAAAATGGTGTGCACTAATTATAATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACGCTAAAGCCATCAAAATGGTGTGCACTAATTATAATTGA  50

seq1  GAAAGAAAGCCAGACCTGATGGTGCAGCTCCTTAAAGGTTTGAGGCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGCCAGACCTGATGGTGCAGCTCCTTAAAGGTTTGAGGCAGGA  100

seq1  GGGTTGTAAGTCCAAAGCCGGCCTGAGCTATACAGCCATTCTGAGGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTAAGTCCAAAGCCGGCCTGAGCTATACAGCCATTCTGAGGAGTT  150

seq1  TGTGATTGCCCACCTCAACATATAAAAGATAAAGGGAGCTGGATACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGCCCACCTCAACATATAAAAGATAAAGGGAGCTGGATACAAAC  200

seq1  CTCAGAAGTACAGCATCTAGTCAGCAAGCACAAGGGGCCTGAGCTCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGTACAGCATCTAGTCAGCAAGCACAAGGGGCCTGAGCTCAATC  250

seq1  TCCAGCACAGCAAAAAAGAAGAGAAAGAAAGAAGATGATGGTCACTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACAGCAAAAAAGAAGAGAAAGAAAGAAGATGATGGTCACTAAGA  300

seq1  TAGATAAAAAGTAAGTTACAAAGCAACACGCTCATATATGGTTTTTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAAAAGTAAGTTACAAAGCAACACGCTCATATATGGTTTTTATTC  350

seq1  ACAATGTGAAGCTGAAATAAATCTTTCCAAAGCAGCCTCCATAGCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGAAGCTGAAATAAATCTTTCCAAAGCAGCCTCCATAGCTGAAT  400

seq1  AATAAAGTGCACTCCAAGCAAATACTGCACATAGTGGACTATATCCCGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTGCACTCCAAGCAAATACTGCACATAGTGGACTATATCCCGGC  450

seq1  TTAAAAAATGTTCACAGCTGAGTAGCTTATCCAGTCACAGGTCGCCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATGTTCACAGCTGAGTAGCTTATCCAGTCACAGGTCGCCACCT  500

seq1  GATCAGACCATGTCCTTATCCAGCAAACACTGACCCAGTCAATGAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACCATGTCCTTATCCAGCAAACACTGACCCAGTCAATGAAGTCA  550

seq1  CTTCTGCATGGTACTTACTGACATGTAGTGAGGAGGGGCCTTCTGGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCATGGTACTTACTGACATGTAGTGAGGAGGGGCCTTCTGGATTG  600

seq1  TCTTTGGTCTGGAATGTTGCCCAGTGCAAGAGCATTTTCTATTCATTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTCTGGAATGTTGCCCAGTGCAAGAGCATTTTCTATTCATTAAC  650

seq1  TTTGTTCAATTTATCTGGCCTGGGCTTTTATCAATAGGAAGCAGCCTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAATTTATCTGGCCTGGGCTTTTATCAATAGGAAGCAGCCTAAG  700

seq1  GGGATAAAAGTCAAAATAATAACAATGGTTTTCTCTAGATAATAGGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAAAGTCAAAATAATAACAATGGTTTTCTCTAGATAATAGGTAAT  750

seq1  TTTTCTTTTTCCGTTTTACCTACATTTTATAAATTTAGTACACTTTAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTCCGTTTTACCTACATTTTATAAATTTAGTACACTTTAAGC  800

seq1  TTTCTTATGCTTATTTATAAGTCATAGCATGTAAAATAGTTACATTTT-A  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCTTATGCTTATTTATAAGTCATAGCATGTAAAATAGTTACATTTTAA  850

seq1  ACCAAATGACTTCTAACAACTAGAATTGGTCTTTTGTATCTTACGGTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATGACTTCTAACAACTAGAATTGGTCTTTTGTATCTTACGGTTAA  900

seq1  CCATTTAATTGAGGCATAATCATGATTTTAGATTTCAAGAGCTTTTTAAA  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCATTTAATTGAGGCATAATCATGATTTTAGATTTC-AGAGCTTTTTAAA  949

seq1  AAGGGCTGTTCTGTAAAGCATAAGGTTTCTACATCACAGAAGTATGGAAG  999
      ||||||||||||||||   ||| |  ||||||||||||| ||||||||||
seq2  AAGGGCTGTTCTGTAAGCAATACG--TTCTACATCACAG-AGTATGGAAG  996

seq1  CAACACTCTAAAGTCATGTGACAGAAAGAAGCAAGTGCAAGTGAGGGACC  1049
      ||||||||| |||||||||||||||||||||||||||| ||||| |||||
seq2  CAACACTCT-AAGTCATGTGACAGAAAGAAGCAAGTGC-AGTGA-GGACC  1043

seq1  TAAAACATAACCCCCCACACACATATA  1076
      |||| |||| ||| |||||| ||||||
seq2  TAAACCATACCCCTCCACAC-CATATA  1069