BAC Information

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BAC

Clone NameB6Ng01-313J03
Chromosome5 (Build37)
Map Location 78,912,103 - 78,913,238
singlet/doubletsinglet
Overlap genenone
Upstream genePea15b, LOC669227, LOC100039398, Mthfr-ps1
Downstream geneEG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313J03.bB6Ng01-313J03.g
ACCGA104746GA104747
length1,1491,120
definitionB6Ng01-313J03.b B6Ng01-313J03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcctttccatgtcatacctgactttccttagtaccaaagtta
agtgtagatgaatgaggctaactaaagccttcaggcactgtgttctttcc
tctctgcttcttttggaaataaagcacttcattcatccttcatctcttct
atgcacatttctcactgtctgccctttaaattctgaagctgtcattcatc
accccagcaaatattccctgatataagccttcccaacttttcagcttttg
cactgaaacatccatccagctcctcgttaataaagatgagtgggctcact
agagacattattatactaggtgtgtttgtgtgatggcacacacactcaca
cacacacacacacacacacacctgctaattttaatgcagttggaatcact
aaccacccaggtctcactatgtttctctagagagtacttgtcttaaaaat
catgaatttctagaatccactatggtttacattaagtttgtattgatgag
tcatatagacattttgttttctattttcatgaatttattataatgatgta
ttaaatgcagataagcaatttactcgtaagggtagctttctctttgctgt
tttccttagcaggcaatacatttgtccttcaaattacagcaaacaatagt
ttttaaaaaattgtttgtcatttcatcatggtgttaacacacttaatgtc
caatatgtagagtggattgtcgaaacatcagacttacgtggttacagaga
tttcctacttatgtaatattcatgacttacttgctgttctttgagtctac
actgcacacagttgagtgttgactaattttgtgttatctcccacttattc
ttagaatgcattatcttttataattgtcatccttacacttcctaattatc
catgtgggttgttctgctattgagtaacatattactttatttttcaataa
ctgtgcctttcacccttatagtcctcacttttctattttaaaggcattgt
tttctcttattatattttaaagaagatacttatctttcccttaacttttt
ggagtaatttctttttagtctggaatatattaagaggatgcttggcagct
ttcatttactaattatcacttttgtgttccctttaaagtctaactgtac

gaattctttagcaaagagctttttttcaatgcaagtctaaaaatttgaag
cacactcacttgaagcacatactgattttaagtgcctcttgaggcgcctg
ataggatagaaggaaactgttaagatgactgtaatatgtctgaagagtga
tattgaggtctacagcttgggtcagtgagaagatggagaagatgaaactg
gttgcaaaaaaggaattaattccagattaactattcatggttatgttgcc
ttttgcacaatgttgccaatccatgttttaaataaagtaataccttcaga
aatgaaaaaaaaaaaaaaacctcagagttactccagaaattaaagacaag
gatattgactgatggaattattattattattattattattattattatta
ttattattatattttctttatatacatttcaaatgttatcccgaaagttc
cctataccctccctctgccctgctcccctacccacccactccattttctt
ggccctggcattcccctgtattggggtatataaagcttggaataccaagg
ggcctctcttgccagtgatggccaactaggccatcttctgctacatatgt
gctagagatacgaggtctggaggtactggttagttcatattgttgttcca
cgtatagggttgcacaccccttcagctccttgggtgctttctctagcttc
tccattggagggccctgtgttccatcttatagatgactgtgagcatccac
ttctgtatttaccaggcactggcatagcctcatacaagacagctataaca
ggctcccttcagcaaaatctttttggcattgggcaatagtgtctgggttt
ggtgactgattatgagatgggtccccgggaggggttagtctctggatagt
ccatccttttctcttagctccaacctttgtctctgtaactcctttccatg
gctaatttgtccccattatagaaggatgagtatccaccccattgcttttc
ctctcctggattttcgtgtgttcgcaaatgatcctggtgactatgttctg
ggcctaatatcactatcatgatgcaattcatgaactcttatggtgaatgg
attaccttcatagcaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78912103_78913238
seq2: B6Ng01-313J03.b_45_1193

seq1  GAATTCTTTCCTTTCCATGTCATACCTGACTTTCCTTAGTACCAAAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTTTCCATGTCATACCTGACTTTCCTTAGTACCAAAGTTA  50

seq1  AGTGTAGATGAATGAGGCTAACTAAAGCCTTCAGGCACTGTGTTCTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGATGAATGAGGCTAACTAAAGCCTTCAGGCACTGTGTTCTTTCC  100

seq1  TCTCTGCTTCTTTTGGAAATAAAGCACTTCATTCATCCTTCATCTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTTCTTTTGGAAATAAAGCACTTCATTCATCCTTCATCTCTTCT  150

seq1  ATGCACATTTCTCACTGTCTGCCCTTTAAATTCTGAAGCTGTCATTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATTTCTCACTGTCTGCCCTTTAAATTCTGAAGCTGTCATTCATC  200

seq1  ACCCCAGCAAATATTCCCTGATATAAGCCTTCCCAACTTTTCAGCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCAAATATTCCCTGATATAAGCCTTCCCAACTTTTCAGCTTTTG  250

seq1  CACTGAAACATCCATCCAGCTCCTCGTTAATAAAGATGAGTGGGCTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAACATCCATCCAGCTCCTCGTTAATAAAGATGAGTGGGCTCACT  300

seq1  AGAGACATTATTATACTAGGTGTGTTTGTGTGATGGCACACACACTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATTATTATACTAGGTGTGTTTGTGTGATGGCACACACACTCACA  350

seq1  CACACACACACACACACACACCTGCTAATTTTAATGCAGTTGGAATCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACCTGCTAATTTTAATGCAGTTGGAATCACT  400

seq1  AACCACCCAGGTCTCACTATGTTTCTCTAGAGAGTACTTGTCTTAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCAGGTCTCACTATGTTTCTCTAGAGAGTACTTGTCTTAAAAAT  450

seq1  CATGAATTTCTAGAATCCACTATGGTTTACATTAAGTTTGTATTGATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTTCTAGAATCCACTATGGTTTACATTAAGTTTGTATTGATGAG  500

seq1  TCATATAGACATTTTGTTTTCTATTTTCATGAATTTATTATAATGATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGACATTTTGTTTTCTATTTTCATGAATTTATTATAATGATGTA  550

seq1  TTAAATGCAGATAAGCAATTTACTCGTAAGGGTAGCTTTCTCTTTGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCAGATAAGCAATTTACTCGTAAGGGTAGCTTTCTCTTTGCTGT  600

seq1  TTTCCTTAGCAGGCAATACATTTGTCCTTCAAATTACAGCAAACAATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTAGCAGGCAATACATTTGTCCTTCAAATTACAGCAAACAATAGT  650

seq1  TTTTAAAAAATTGTTTGTCATTTCATCATGGTGTTAACACACTTAATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAATTGTTTGTCATTTCATCATGGTGTTAACACACTTAATGTC  700

seq1  CAATATGTAGAGTGGATTGTCGAAACATCAGACTTACGTGGTTACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTAGAGTGGATTGTCGAAACATCAGACTTACGTGGTTACAGAGA  750

seq1  TTTCCTACTTATGTAATATTCATGACTTACTTGCTGTTCTTTGAGTCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTACTTATGTAATATTCATGACTTACTTGCTGTTCTTTGAGTCTAC  800

seq1  ACTGCACACAGTTGAGTGTTGACTAATTTTGTGTTATCTCCCACTTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACACAGTTGAGTGTTGACTAATTTTGTGTTATCTCCCACTTATTC  850

seq1  TTAGGAATGCATTATC-TTTATAA-TGTCATCCTTACACTTCCTAATTAT  898
      ||| |||||||||||| ||||||| |||||||||||||||||||||||||
seq2  TTA-GAATGCATTATCTTTTATAATTGTCATCCTTACACTTCCTAATTAT  899

seq1  CCATGT-GGTTGTTCTGCTATTGAGTAACATATTACTTTATTTT--CATA  945
      |||||| |||||||||||||||||||||||||||||||||||||   |||
seq2  CCATGTGGGTTGTTCTGCTATTGAGTAACATATTACTTTATTTTTCAATA  949

seq1  ACTGTGCCTTTCACCCTTATAGTCCTCACTTTTCTATTTTAAAAGCAATT  995
      ||||||||||||||||||||||||||||||||||||||||||| ||| | 
seq2  ACTGTGCCTTTCACCCTTATAGTCCTCACTTTTCTATTTTAAAGGCATTG  999

seq1  GTTTCTCTTA-TATA-TTTAAAG-AGATAC-TATCTTTCCCTTAAC-TTT  1040
       ||||||||| |||| ||||||| |||||| ||||||||||||||| |||
seq2  TTTTCTCTTATTATATTTTAAAGAAGATACTTATCTTTCCCTTAACTTTT  1049

seq1  TGAAGTAATTTCTTTTAGTTCTTG-ATATA-TAAGAAGATGCTTGGCAGC  1088
      || |||||||||||||   ||| | ||||| ||||| |||||||||||||
seq2  TGGAGTAATTTCTTTTTAGTCTGGAATATATTAAGAGGATGCTTGGCAGC  1099

seq1  CTTCATTTACTAA-TATCACTTTTG-GTCCCCTTAAAAGTCTACCTGTAC  1136
       |||||||||||| ||||||||||| || ||||| |||||||| ||||||
seq2  TTTCATTTACTAATTATCACTTTTGTGTTCCCTTTAAAGTCTAACTGTAC  1149


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