BAC Information

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BAC

Clone NameB6Ng01-317K17
Chromosome5 (Build37)
Map Location 63,703,355 - 63,704,522
singlet/doubletsinglet
Overlap genenone
Upstream geneCentd1
Downstream gene3110047P20Rik, LOC100042133, 0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317K17.b
ACCGA107756
length1,157
definitionB6Ng01-317K17.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacttattatgaagtaataacttgaacaaataaacacagaacat
gtagggcagaaagtaggaagaaagcaatgccagcaggtgattgactgagg
aagctcatgtactcagtacactctgagtagttggaacacagtggtgcatt
gaatctttacaatttttttggctttatcttcaacttcaaaatgtgaatgc
tacagtagaaagtgacatgacttaccaagtttatgtagccaaaggtggca
aagactcaagttcaagaattccatattcatagctaacatttgaaatattc
cattctacctatcctgtcttttctacagaagttcagaaaggttttctttg
ttcctagagctgtgccaatacagtatcaaacttgaggccaagaggtagag
gcagatgaaaagagatggcaaaaccgaagtcttgaaatagtaagaaaaga
attcaactgaggatgtaggagaacattaccacacagtgactgtgggcttt
ccaaaaacactcaaaacagaatgtacaggtatcattggcagtgcacatac
acatgtcttgagacatatcatttctttatgtactgatagtatgattaaaa
ggaaagacaaaatattaatcctacataaggcaacatggttacatggttac
tggtcacatgagttaccaggtgtagattctctaagattcagagattttaa
gaattagggaactcagcgtaaggtcagatcatcattgaccattgagaaat
caataggtcagaccatagctacaccacttaaaatgccagctgtaaaggga
tgagacggtggtcaggcatcaagcaagaagtgaaggcaacctctcattac
cttcaaaatacctttaaagtcaagactacaacctcagggcataggaagtt
cctacttgattctgcattaatgaaagtcaagatgcacacagcaataattg
tttaagtgaaaaaaatgatggagttgttaatttttcatgttgcttcacat
aaatattacactggcattgaaacatgtaattattttttctcttcagttcc
tgatagagtgcatggtatcaaggtgaatgatactatctagttaagctacc
actattcagatcatcttctttccactaagctccataaatgtctaacttaa
cacagaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_63703355_63704522
seq2: B6Ng01-317K17.b_52_1208

seq1  GAATTCTACTTATTATGAAGTAATAACTTGAACAAATAAACACAGAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTATTATGAAGTAATAACTTGAACAAATAAACACAGAACAT  50

seq1  GTAGGGCAGAAAGTAGGAAGAAAGCAATGCCAGCAGGTGATTGACTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCAGAAAGTAGGAAGAAAGCAATGCCAGCAGGTGATTGACTGAGG  100

seq1  AAGCTCATGTACTCAGTACACTCTGAGTAGTTGGAACACAGTGGTGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATGTACTCAGTACACTCTGAGTAGTTGGAACACAGTGGTGCATT  150

seq1  GAATCTTTACAATTTTTTTGGCTTTATCTTCAACTTCAAAATGTGAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTACAATTTTTTTGGCTTTATCTTCAACTTCAAAATGTGAATGC  200

seq1  TACAGTAGAAAGTGACATGACTTACCAAGTTTATGTAGCCAAAGGTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGAAAGTGACATGACTTACCAAGTTTATGTAGCCAAAGGTGGCA  250

seq1  AAGACTCAAGTTCAAGAATTCCATATTCATAGCTAACATTTGAAATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCAAGTTCAAGAATTCCATATTCATAGCTAACATTTGAAATATTC  300

seq1  CATTCTACCTATCCTGTCTTTTCTACAGAAGTTCAGAAAGGTTTTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTACCTATCCTGTCTTTTCTACAGAAGTTCAGAAAGGTTTTCTTTG  350

seq1  TTCCTAGAGCTGTGCCAATACAGTATCAAACTTGAGGCCAAGAGGTAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAGCTGTGCCAATACAGTATCAAACTTGAGGCCAAGAGGTAGAG  400

seq1  GCAGATGAAAAGAGATGGCAAAACCGAAGTCTTGAAATAGTAAGAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGAAAAGAGATGGCAAAACCGAAGTCTTGAAATAGTAAGAAAAGA  450

seq1  ATTCAACTGAGGATGTAGGAGAACATTACCACACAGTGACTGTGGGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTGAGGATGTAGGAGAACATTACCACACAGTGACTGTGGGCTTT  500

seq1  CCAAAAACACTCAAAACAGAATGTACAGGTATCATTGGCAGTGCACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAACACTCAAAACAGAATGTACAGGTATCATTGGCAGTGCACATAC  550

seq1  ACATGTCTTGAGACATATCATTTCTTTATGTACTGATAGTATGATTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTTGAGACATATCATTTCTTTATGTACTGATAGTATGATTAAAA  600

seq1  GGAAAGACAAAATATTAATCCTACATAAGGCAACATGGTTACATGGTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACAAAATATTAATCCTACATAAGGCAACATGGTTACATGGTTAC  650

seq1  TGGTCACATGAGTTACCAGGTGTAGATTCTCTAAGATTCAGAGATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACATGAGTTACCAGGTGTAGATTCTCTAAGATTCAGAGATTTTAA  700

seq1  GAATTAGGGAACTCAGCGTAAGGTCAGATCATCATTGACCATTGAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGGGAACTCAGCGTAAGGTCAGATCATCATTGACCATTGAGAAAT  750

seq1  CAATAGGTCAGACCATAGCTACACCACTTAAAATGCCAGCTGTAAAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGTCAGACCATAGCTACACCACTTAAAATGCCAGCTGTAAAGGGA  800

seq1  TGAGACGGTGGTCAGGCATCAAGCAAGAAGTGAAGGCAACCTCTCATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGGTGGTCAGGCATCAAGCAAGAAGTGAAGGCAACCTCTCATTAC  850

seq1  CTTCAAAATACCTTTAAAGTCAAGACTACAACCTCAGGGCATAGGAAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAATACCTTTAAAGTCAAGACTACAACCTCAGGGCATAGGAAGTT  900

seq1  CCTACTTGATTCTGCATTAATGAAAGTCAAGATGCACACAGCAATAATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTGATTCTGCATTAATGAAAGTCAAGATGCACACAGCAATAATTG  950

seq1  TTTAAGTGAAAAAAATGATGGAGTTGTTAATTTTTCATGTTGCTTCACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGAAAAAAATGATGGAGTTGTTAATTTTTCATGTTGCTTCACAT  1000

seq1  AAATATTACACTGGGCATTGAAACAATGTAATTA-TTTTTCTCTTCAAGT  1049
      |||||||||||| ||||||||||| ||||||||| ||||||||||| |||
seq2  AAATATTACACT-GGCATTGAAAC-ATGTAATTATTTTTTCTCTTC-AGT  1047

seq1  TCCTGGATAGAGTTGCATGGTATCAAGGTTGAATTGATACTAATCTAGTT  1099
      |||| ||||||| ||||||||||||||| |||| ||||||| ||||||||
seq2  TCCT-GATAGAG-TGCATGGTATCAAGG-TGAA-TGATACT-ATCTAGTT  1092

seq1  AAGCTACCCACTAATCAGATCATCCTTCTTTCCCACT-AGCTCCAATTTA  1148
      |||||| |||||| ||||||||| ||||||| ||||| |||||||  | |
seq2  AAGCTA-CCACTATTCAGATCAT-CTTCTTT-CCACTAAGCTCCA--TAA  1137

seq1  ATGTCTACTTTAACACAGAA  1168
      |||||||  |||||||||||
seq2  ATGTCTAACTTAACACAGAA  1157


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