BAC Information

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BAC

Clone NameB6Ng01-320F15
Chromosome5 (Build37)
Map Location 82,367,988 - 82,368,789
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn3
Downstream geneEG433912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320F15.bB6Ng01-320F15.g
ACCGA109742GA109743
length8021,175
definitionB6Ng01-320F15.b B6Ng01-320F15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaagtctaaagaactgagcttccccagcgttaggaattctcat
tctgagggcgccttcggtatactggacaacagtggaacaccagctgagtc
tacagcagttggcaattgattcctgggacccaggaatacatatgtatctc
ttgttttatttaatggtttgctgtagattgttatttgatgtttcccaata
tccagcgcaggataagtatacaatgaaatgccaataattctccttagtga
gttatgtgtttatggggtttcagatttaaacataatactttattcactag
attttccttacttcaattattgaacaaaaagaagataagataatttgaat
acatctttaatgttgtttcctgacttccttttagtatataaataggcctt
tgctattatgatggaagagaagatgaggccaccatgctgctaattgtatg
atgtgtggaaagcagaatggacaaaggaaggctaggaaagatatgtacat
caaatcacacccccagtgactggcaaattcagaggcccatcctctatttc
catcactctcattagtcagttccaatactgaatccatcaatggagtaaac
tatttattagattactacctttgagttctgattatctattgaaataatgt
gaggaatatattccgattttgctttaccaatcgaacccattaatgtcagt
atcaacaaaacaaaacaaaacaaaacaaaacatgttcctcctgttgaaaa
atgtggttatttcttatgcttgtgttgggaatttggtgggtaggttagta
tg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaac
acagaagtggaatgctcacagtcagctaatggatggatcacaggtctccc
aatgggaggagctagagaaagtacccaaggagctaaagggattcttcaac
cctatagtggaacaacattatgaactagcagtaccctgagcctctgactt
ctagctgcatattgtatccaaacgatggcctagtccggtcatcactggaa
agaagacgtccatgaaccgctgaacctttgtgtgtccggtacaggggtaa
cgctctaaggctccataaaagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_82367988_82368789
seq2: B6Ng01-320F15.b_47_848

seq1  GAATTCTGAAGTCTAAAGAACTGAGCTTCCCCAGCGTTAGGAATTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGTCTAAAGAACTGAGCTTCCCCAGCGTTAGGAATTCTCAT  50

seq1  TCTGAGGGCGCCTTCGGTATACTGGACAACAGTGGAACACCAGCTGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGGCGCCTTCGGTATACTGGACAACAGTGGAACACCAGCTGAGTC  100

seq1  TACAGCAGTTGGCAATTGATTCCTGGGACCCAGGAATACATATGTATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGTTGGCAATTGATTCCTGGGACCCAGGAATACATATGTATCTC  150

seq1  TTGTTTTATTTAATGGTTTGCTGTAGATTGTTATTTGATGTTTCCCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATTTAATGGTTTGCTGTAGATTGTTATTTGATGTTTCCCAATA  200

seq1  TCCAGCGCAGGATAAGTATACAATGAAATGCCAATAATTCTCCTTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCGCAGGATAAGTATACAATGAAATGCCAATAATTCTCCTTAGTGA  250

seq1  GTTATGTGTTTATGGGGTTTCAGATTTAAACATAATACTTTATTCACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTGTTTATGGGGTTTCAGATTTAAACATAATACTTTATTCACTAG  300

seq1  ATTTTCCTTACTTCAATTATTGAACAAAAAGAAGATAAGATAATTTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTACTTCAATTATTGAACAAAAAGAAGATAAGATAATTTGAAT  350

seq1  ACATCTTTAATGTTGTTTCCTGACTTCCTTTTAGTATATAAATAGGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTAATGTTGTTTCCTGACTTCCTTTTAGTATATAAATAGGCCTT  400

seq1  TGCTATTATGATGGAAGAGAAGATGAGGCCACCATGCTGCTAATTGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTATGATGGAAGAGAAGATGAGGCCACCATGCTGCTAATTGTATG  450

seq1  ATGTGTGGAAAGCAGAATGGACAAAGGAAGGCTAGGAAAGATATGTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGGAAAGCAGAATGGACAAAGGAAGGCTAGGAAAGATATGTACAT  500

seq1  CAAATCACACCCCCAGTGACTGGCAAATTCAGAGGCCCATCCTCTATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACACCCCCAGTGACTGGCAAATTCAGAGGCCCATCCTCTATTTC  550

seq1  CATCACTCTCATTAGTCAGTTCCAATACTGAATCCATCAATGGAGTAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCTCATTAGTCAGTTCCAATACTGAATCCATCAATGGAGTAAAC  600

seq1  TATTTATTAGATTACTACCTTTGAGTTCTGATTATCTATTGAAATAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTAGATTACTACCTTTGAGTTCTGATTATCTATTGAAATAATGT  650

seq1  GAGGAATATATTCCGATTTTGCTTTACCAATCGAACCCATTAATGTCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATATATTCCGATTTTGCTTTACCAATCGAACCCATTAATGTCAGT  700

seq1  ATCAACAAAACAAAACAAAACAAAACAAAACATGTTCCTCCTGTTGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAAACAAAACAAAACAAAACAAAACATGTTCCTCCTGTTGAAAA  750

seq1  ATGTGGTTATTTCTTATGCTTGTGTTGGGAATTTGGTGGGTAGGTTAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTATTTCTTATGCTTGTGTTGGGAATTTGGTGGGTAGGTTAGTA  800

seq1  TG  802
      ||
seq2  TG  802


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