BAC Information

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BAC

Clone NameB6Ng01-321N17
Chromosome17 (Build37)5 (Build37)
Map Location 94,592,411 - 94,592,64780,469,908 - 80,471,081
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdcyap1, LOC676157, LOC627503
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321N17.bB6Ng01-321N17.g
ACCGA110857GA110858
length2151,160
definitionB6Ng01-321N17.b B6Ng01-321N17.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,592,411 - 94,592,647)(80,469,908 - 80,471,081)
sequence
tttgtttacctctgagccccatttttaatggggttatttgattttctgga
gttcaccttcttgagttatatatatacacatatatttatgtatatatata
tatatatatatatatatatatatattggattttatatatatatatatgta
tatatatatatagagagagagagatatatatatatatatatagacagaca
gagagagagagagag
gaattcaaccttatcaagtgatgggattgaaagcactcacgccagctgct
gtcaagaacacatggaaaaaaatcttggaaaactaaaatattttcaggaa
aaagtctgacgttcctgaggaagccagtgaggatggtaatcagaagtaca
aattacctctgtaaataagtcctgtgggctgggacctagacattttttta
acctgttttgacagagatgtgagtttctccacctccactagacattacaa
aagatgtatggattctatgtgtacctaattcaattttccttgcttacaca
tctgtattccttcagtttaaacatactaagcagactctgctgtcaggttc
tcatgttatattttgtctacaacacaggctttctttccctaagagactat
aacctctaaactccatatggtagctcttccattggatttcaagaggaaat
ggagcagatttatttccattcatatcctcacaacataaataataagcaaa
gtgagaatccaaatgttaattttataacaaacataatattcagcattttt
tgaaacaatatttatgaaaaatacagaattatacatattgcactattgct
gacacttattgtcattaagtaaagtagtagttgatttatacaaaatataa
tcaactgttggatgtatttgattgtctacaaccagagaaaatatttcaga
aaattatataggatatgttcaaatatgttcatttttatacacattaagca
tttcatccaagaaaagttaaatatcacaggtaagaagttattttgcatca
caaatttgactaaatatcttgtcacagaaaactttctgtacaatagaccc
aaccctctctgtgtcccagttcgagaaacctggtcaggcttcccttcagt
ggtcaaaggaattgtgctcctgtggctacaacttagggttttattgatgt
gatgaaaccccacaccaaattcaagttagggaagaaaggttaattggatt
tatacttccagatatatccatcatgagagaaagtcaggacaggactcact
caggctagatcagaggcaagagttgatgcaaagctctggtgtgcctgctc
ccagccttgctcagcctgccttctatatagactcgaaggcaagtccagat
gctcacccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94592411_94592647
seq2: B6Ng01-321N17.b_117_265

seq1  TATATATATATACATATATATATATATGTATATATATATACATGTATATA  50
                                                        
seq2  --------------------------------------------------  0

seq1  TATATGTATATATATATATGTATCTATATATATATGTATATATATATACA  100
                                          |||||||||| |||
seq2  ------------------------------------TATATATATACACA  14

seq1  TATATATAGACATATATACATATATATACATATATATACATATATATACA  150
      ||||| ||   ||||||| ||||||||| ||||||||| |||||| |  |
seq2  TATATTTATGTATATATATATATATATATATATATATATATATAT-TGGA  63

seq1  TATATATATATGTATATATATATATATGTATCTATATATATATGTATATA  200
      | | ||||||| ||||||| ||||||| ||| || | | | |   |||||
seq2  T-TTTATATATATATATATGTATATATATATATAGAGAGAGAGAGATATA  112

seq1  TATATACATATATATATAGACAGAGAGAGAGAGAGAG  237
      |||||| ||||||| | ||||||||||||||||||||
seq2  TATATATATATATAGACAGACAGAGAGAGAGAGAGAG  149

seq1: chr5_80469908_80471081
seq2: B6Ng01-321N17.g_69_1228 (reverse)

seq1  GTGGGTGAAGCCATCCCTGGACTTGTCCTTCTGAGTTCTATA-AGAAGGC  49
      ||||||||   |||  ||||||||| ||||| ||| |||||| |||||||
seq2  GTGGGTGA--GCAT--CTGGACTTG-CCTTC-GAG-TCTATATAGAAGGC  43

seq1  AAGCTGAGCAAGCCTGTGAGCAGCACCACCAGAGGCCTCTGCATCAACTC  99
      | |||||||||| ||| ||||||   ||||||||  || |||||||||||
seq2  AGGCTGAGCAAGGCTGGGAGCAGGCACACCAGAG--CTTTGCATCAACTC  91

seq1  TTGCCTCCTGGATCTAGCCCTGAGTGAGTTCCTGTCCTGACTTTCTCTCA  149
      |||||||   ||||||| |||||||||| |||||||||||||||||||||
seq2  TTGCCTC--TGATCTAG-CCTGAGTGAG-TCCTGTCCTGACTTTCTCTCA  137

seq1  TGATGGATTATAATCTGGAAGTATAAATCCAATTAACCTTTCTTCCCTAA  199
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  TGATGGA-TAT-ATCTGGAAGTATAAATCCAATTAACCTTTCTTCCCTAA  185

seq1  CTTGAATTTGGTTGTGGGGTTTCATCACATCAATAAAACCCTAAGTTGTA  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTTGG-TGTGGGGTTTCATCACATCAATAAAACCCTAAGTTGTA  234

seq1  GCCACAGGAGCACAATTCCTTTGACCACTGAA-GGAAGCCTGACCAGGTT  298
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCCACAGGAGCACAATTCCTTTGACCACTGAAGGGAAGCCTGACCAGGTT  284

seq1  TCTCGAACTGGGACACAGAGAGGGTTGGGTCTATTGTACAGAAAGTTTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAACTGGGACACAGAGAGGGTTGGGTCTATTGTACAGAAAGTTTTC  334

seq1  TGTGACAAGATATTTAGTCAAATTTGTGATGCAAAATAACTTCTTACCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAGATATTTAGTCAAATTTGTGATGCAAAATAACTTCTTACCTG  384

seq1  TGATATTTAACTTTTCTTGGATGAAATGCTTAATGTGTATAAAAATGAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTAACTTTTCTTGGATGAAATGCTTAATGTGTATAAAAATGAAC  434

seq1  ATATTTGAACATATCCTATATAATTTTCTGAAATATTTTCTCTGGTTGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAACATATCCTATATAATTTTCTGAAATATTTTCTCTGGTTGTA  484

seq1  GACAATCAAATACATCCAACAGTTGATTATATTTTGTATAAATCAACTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCAAATACATCCAACAGTTGATTATATTTTGTATAAATCAACTAC  534

seq1  TACTTTACTTAATGACAATAAGTGTCAGCAATAGTGCAATATGTATAATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACTTAATGACAATAAGTGTCAGCAATAGTGCAATATGTATAATT  584

seq1  CTGTATTTTTCATAAATATTGTTTCAAAAAATGCTGAATATTATGTTTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTTTCATAAATATTGTTTCAAAAAATGCTGAATATTATGTTTGT  634

seq1  TATAAAATTAACATTTGGATTCTCACTTTGCTTATTATTTATGTTGTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTAACATTTGGATTCTCACTTTGCTTATTATTTATGTTGTGAG  684

seq1  GATATGAATGGAAATAAATCTGCTCCATTTCCTCTTGAAATCCAATGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAATGGAAATAAATCTGCTCCATTTCCTCTTGAAATCCAATGGAA  734

seq1  GAGCTACCATATGGAGTTTAGAGGTTATAGTCTCTTAGGGAAAGAAAGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACCATATGGAGTTTAGAGGTTATAGTCTCTTAGGGAAAGAAAGCC  784

seq1  TGTGTTGTAGACAAAATATAACATGAGAACCTGACAGCAGAGTCTGCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTAGACAAAATATAACATGAGAACCTGACAGCAGAGTCTGCTTA  834

seq1  GTATGTTTAAACTGAAGGAATACAGATGTGTAAGCAAGGAAAATTGAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTAAACTGAAGGAATACAGATGTGTAAGCAAGGAAAATTGAATT  884

seq1  AGGTACACATAGAATCCATACATCTTTTGTAATGTCTAGTGGAGGTGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACACATAGAATCCATACATCTTTTGTAATGTCTAGTGGAGGTGGAG  934

seq1  AAACTCACATCTCTGTCAAAACAGGTTAAAAAAATGTCTAGGTCCCAGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACATCTCTGTCAAAACAGGTTAAAAAAATGTCTAGGTCCCAGCC  984

seq1  CACAGGACTTATTTACAGAGGTAATTTGTACTTCTGATTACCATCCTCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACTTATTTACAGAGGTAATTTGTACTTCTGATTACCATCCTCAC  1034

seq1  TGGCTTCCTCAGGAACGTCAGACTTTTTCCTGAAAATATTTTAGTTTTCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCTCAGGAACGTCAGACTTTTTCCTGAAAATATTTTAGTTTTCC  1084

seq1  AAGATTTTTTTCCATGTGTTCTTGACAGCAGCTGGCGTGAGTGCTTTCAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTTTCCATGTGTTCTTGACAGCAGCTGGCGTGAGTGCTTTCAA  1134

seq1  TCCCATCACTTGATAAGGTTGAATTC  1174
      ||||||||||||||||||||||||||
seq2  TCCCATCACTTGATAAGGTTGAATTC  1160