BAC Information

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BAC

Clone NameB6Ng01-335I21
Chromosome5 (Build37)
Map Location 31,749,660 - 31,750,887
singlet/doubletsinglet
Overlap genenone
Upstream geneOtof, 1700001C02Rik, 1700041E20Rik, Kcnk3, 4930471M23Rik, Cenpa, Dpysl5, Mapre3, 1110039B18Rik, 9430057O19Rik, 2310016E02Rik, Emilin1, Khk, Cgref1, Abhd1, Preb, Tcf23, Slc5a6, 0610007C21Rik, Cad, Slc30a3, Dnajc5g, Trim54, Ucn, Mpv17, Gtf3c2, Eif2b4, Snx17, Zfp513, Ppm1g, ENSMUSG00000055424, Nrbp1, Krtcap3, Ift172, Fndc4, Gckr
Downstream geneZfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000, Bre, Fosl2, LOC672217, Plb1, EG665350, LOC545743
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335I21.bB6Ng01-335I21.g
ACCGA120741GA120742
length1,2051,211
definitionB6Ng01-335I21.b B6Ng01-335I21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaaaggctgaaaagcacctgcaaaaatg
ttcaacatccttaaacatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaacatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggta
ggattgtaagcttgtacaatctctctggaaagtctggcggttcctcagaa
aactggacatagtactaccggaagatccagcaatacctctcctgggcata
tacccataagatgttccaacttgtaataaggacacatgctccactatgtt
tatagcagccttatttataatagccagaagctggaaagaacccagatgtc
cctcaacagagggatggatatagaaaatgtggtacatttacacaatggag
tactaatcagctattaaaaacaatgaattcatgaaattcttcggcaaatg
gatgtatctggaggatatcatcctgagtgaggtaacccaatcacaaaaga
acacacatgatttgcactcactgattagcggatattaacccagaaactta
gaatacccaagatacaatttgcaagacacatgaaactcaagaaggaatac
caaagtgtggatacttcattccttcttagaatggggaacaaaatacccat
ggaaggagttacagagacaaaaggaagggccatccagagactgccccacc
cagagatctatcccatatacaagtaccaaacccagatactatcgcatatg
ccaggaagattttgctgacaggaccctgatatagctctctcttgtgaggc
tatgccagtgcctggcaaatacagaagtggatgctcacagtcatctattg
gatggaacacagggcccctaattaaaggagctagagaaagtacccaagga
tctaaggagtctgcacttttaggaagatcacaatatgacctagcagtatt
ccccagagctgtgttcctctagttgcatatgtagcagaggatgcctagtt
cagccatcaatgggaggagaggccttggcctggtgaagatctattggccc
taattcagagaatgccgttgtcaggagccagaattggctttgttagatca
ggcccgggcattgcatacggcacttcgggatatgacatttgcaagcgtta
caaag
gaattcacaccatttgactgaggcctcaaacttaatacaggttgtgcact
ttcctgccataaccccccccaaaaaagtgggttcttcaaaagtgggttct
tttgaaactttgcccctagcattaagttagatgaacccacaccttgagaa
ggtgatctagagtttaacagaacagattttgtactttgagactctgagtc
aggggtcaactcaaaggactttatgctttgcaactgtggccctgaactgg
gctttacagaacttatgcactgaggttttgactcaggattaaacccagaa
gaattcatatcttgactttgtggaccagggttgaattccataggtggtat
acccaaattgtttgaccctggagttaattcagacttaaaatctttcaagt
gttgctcttgaagttttggagcttgtaaatgtggcccagggttgtagcca
atagaatttacagactgagattcttgacttagagtacatgcagaagaatt
tatatcttgcaaatgtatcctagtattgcaccaaacaggatttacacaca
gaatttgtggtgatggaaatgtacaaaaattcacaccttgaaaaagtggc
ccatgattatacctattagaattttcacacagaggattttgcccagcagt
gtatacaaaagaattcacaccttgcaaatgagattcaagattgcactcag
tggaatttactcatggagggcttggctctagtgtgcatgcagaagaattt
acacactgaggacttggcactgggatacatgcagaagaatctccacactg
atgatttgatcctgggatgcatacacaagaatttgcacactgaggacttg
tctctggggtgcattcagtagaatttatgtcttgcaaatgtgactcagga
ttgctgccaatagaatctacacattgcaattttgatcctgagaaccacaa
ggaagaaactgttccatgcaaatatattccaggattgaactcacacctta
tacgctgagtgtttggatctggaatgcatgcagaaggatttgtatcttgc
aaatatggcacagaaattgactcacttgcattacatttgagatttatatg
gaggtagattgcagaaatcaatatctcaaggtgtgacccaggcagaacac
cctagattatacctgagtctgactagggttactcgaaattcactcttgat
ctcggatttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_31749660_31750887
seq2: B6Ng01-335I21.g_64_1274 (reverse)

seq1  CCAAATCCGAGATACAAGATGTAGAATTATCTGAGTTACACCCTAGTCCA  50
      ||||||||||||| ||||| || ||||| || ||||   |||||||| ||
seq2  CCAAATCCGAGAT-CAAGA-GT-GAATT-TC-GAGT--AACCCTAGT-CA  42

seq1  GAACTTCAGGGTATAAAATCTAAGGTGTTCTGCCCTGGGTCACACTTGGA  100
      ||   |||||   || |||||| ||||||||| |||||||||||| | | 
seq2  GA--CTCAGG---TATAATCTAGGGTGTTCTG-CCTGGGTCACACCTTG-  85

seq1  AGATA-TGTATTCTGC-ATCTACCTCCAATATAAATTCTCAATATGTAAA  148
      ||||| ||  |||||| |||||||||| ||||||| |||||| |||| ||
seq2  AGATATTGATTTCTGCAATCTACCTCC-ATATAAA-TCTCAA-ATGT-AA  131

seq1  TTCCAGTGAGTCAATATCTGTGCCATATTTGCAAGATACAAATTCCTCTG  198
      | | ||||||||||| ||||||||||||||||||||||||||| | ||||
seq2  TGCAAGTGAGTCAATTTCTGTGCCATATTTGCAAGATACAAATCCTTCTG  181

seq1  CATGCATTCCAGATCCAAACACTCAGCGTATAAGGTGTGAGTTCAATCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATTCCAGATCCAAACACTCAGCGTATAAGGTGTGAGTTCAATCCT  231

seq1  GGAATATATTTGCATGGAACAGTTTCTTCCTTGTGGTTCTCAGGATCAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATATTTGCATGGAACAGTTTCTTCCTTGTGGTTCTCAGGATCAAA  281

seq1  ATTGCAATGTGTAGATTCTATTGGCAGCAATCCTGAGTCACATTTGCAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATGTGTAGATTCTATTGGCAGCAATCCTGAGTCACATTTGCAAG  331

seq1  ACATAAATTCTACTGAATGCACCCCAGAGACAAGTCCTCAGTGTGCAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATTCTACTGAATGCACCCCAGAGACAAGTCCTCAGTGTGCAAAT  381

seq1  TCTTGTGTATGCATCCCAGGATCAAATCATCAGTGTGGAGATTCTTCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTATGCATCCCAGGATCAAATCATCAGTGTGGAGATTCTTCTGC  431

seq1  ATGTATCCCAGTGCCAAGTCCTCAGTGTGTAAATTCTTCTGCATGCACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCCCAGTGCCAAGTCCTCAGTGTGTAAATTCTTCTGCATGCACAC  481

seq1  TAGAGCCAAGCCCTCCATGAGTAAATTCCACTGAGTGCAATCTTGAATCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCAAGCCCTCCATGAGTAAATTCCACTGAGTGCAATCTTGAATCT  531

seq1  CATTTGCAAGGTGTGAATTCTTTTGTATACACTGCTGGGCAAAATCCTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCAAGGTGTGAATTCTTTTGTATACACTGCTGGGCAAAATCCTCT  581

seq1  GTGTGAAAATTCTAATAGGTATAATCATGGGCCACTTTTTCAAGGTGTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAATTCTAATAGGTATAATCATGGGCCACTTTTTCAAGGTGTGA  631

seq1  ATTTTTGTACATTTCCATCACCACAAATTCTGTGTGTAAATCCTGTTTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTACATTTCCATCACCACAAATTCTGTGTGTAAATCCTGTTTGG  681

seq1  TGCAATACTAGGATACATTTGCAAGATATAAATTCTTCTGCATGTACTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATACTAGGATACATTTGCAAGATATAAATTCTTCTGCATGTACTCT  731

seq1  AAGTCAAGAATCTCAGTCTGTAAATTCTATTGGCTACAACCCTGGGCCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGAATCTCAGTCTGTAAATTCTATTGGCTACAACCCTGGGCCAC  781

seq1  ATTTACAAGCTCCAAAACTTCAAGAGCAACACTTGAAAGATTTTAAGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAGCTCCAAAACTTCAAGAGCAACACTTGAAAGATTTTAAGTCT  831

seq1  GAATTAACTCCAGGGTCAAACAATTTGGGTATACCACCTATGGAATTCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACTCCAGGGTCAAACAATTTGGGTATACCACCTATGGAATTCAA  881

seq1  CCCTGGTCCACAAAGTCAAGATATGAATTCTTCTGGGTTTAATCCTGAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTCCACAAAGTCAAGATATGAATTCTTCTGGGTTTAATCCTGAGT  931

seq1  CAAAACCTCAGTGCATAAGTTCTGTAAAGCCCAGTTCAGGGCCACAGTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTCAGTGCATAAGTTCTGTAAAGCCCAGTTCAGGGCCACAGTTG  981

seq1  CAAAGCATAAAGTCCTTTGAGTTGACCCCTGACTCAGAGTCTCAAAGTAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATAAAGTCCTTTGAGTTGACCCCTGACTCAGAGTCTCAAAGTAC  1031

seq1  AAAATCTGTTCTGTTAAACTCTAGATCACCTTCTCAAGGTGTGGGTTCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGTTCTGTTAAACTCTAGATCACCTTCTCAAGGTGTGGGTTCAT  1081

seq1  CTAACTTAATGCTAGGGGCAAAGTTTCAAAAGAACCCACTTTTGAAGAAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTAATGCTAGGGGCAAAGTTTCAAAAGAACCCACTTTTGAAGAAC  1131

seq1  CCACTTTTTTGGGGGGGGTTATGGCAGGAAAGTGCACAACCTGTATTAAG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTTTGGGGGGGGTTATGGCAGGAAAGTGCACAACCTGTATTAAG  1181

seq1  TTTGAGGCCTCAGTCAAATGGTGTGAATTC  1228
      ||||||||||||||||||||||||||||||
seq2  TTTGAGGCCTCAGTCAAATGGTGTGAATTC  1211