BAC Information

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BAC

Clone NameB6Ng01-337B01
Chromosome5 (Build37)
Map Location 4,356,889 - 4,357,413
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337B01.bB6Ng01-337B01.g
ACCGA121802GA121803
length5481,178
definitionB6Ng01-337B01.b B6Ng01-337B01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccccaagtctttcctgatctttgtgcatccactgtttctga
actgctgacattttcagaacagttcctatgacaagtttttaaaagaacaa
cttttttactgccagaagattattttatggtacatacgaaagttctgttt
tcctaaattcaaaatctctggtcctatgactgatgaattcttcagaaacc
atatgccatcagatgggtgtcacagtcatgtcctgaagagatttctttgc
cttatctagatgttctaacacaaattgtcacaggagaggaacaggaccag
gggcctggcccacacccccatgtgagggggggggggagggcaaggagggg
cctgaaggaccccagggctgggctacccccccagttacttttcctttcaa
tcctaagtcactttgaagctaccaaaattttggccccagggtgtgggctc
tgcttcagggagaaaagggagcaaaaacaatttttgaatttcaaactcaa
atttccttttctttccatttcaattttccctttcccacttaaaaaatt
agatctcagaagatggaaagatcttctatgctcatggattgtcaggatta
atataatgaaaatggtcatcttgctaaaagcaatctacagattcaatgca
atccccatcaaaattacaaatcaattcttcatagatttagaaagagcaat
ttgcaaattaatttggaataacagaaaacccaggatattgaaaactattc
tcaataataagagaacttcttggggaatcaccatcctgacctcaaactgt
attacagagcaatagtgataaaaactgtatgatattggtacagagatagg
caggaagatcaatggaatagaattgaagatccagaaattaacccaaacac
ctatggtcacttggtctttgacaaaggagctaaaaccatccagtggaaaa
aagacaccattttcaacaaatggtgctgatccaactggaggtcaacatgt
agaagaatgcaaattgatccattcttatctccttgtacaaagctcaaatc
caagtggatcaaggacctcaacataaaaccagatacactgaaacttatcg
aggagaaagttgggaagggctttgaacacgtggccacaggggaaattttc
ctaaacagaacaccattgacttatgctctaagatcaagaattgacaaatg
ggatctcctaaaattgcaaagcttctgtaaggaaaaggacactgtcaata
ggacaaactggcaaccaatcgattgggaaaagatctttaccaatcctaaa
tccgatagaggtctaatatccaatatatacaaagaactcaagaagttaga
ctccagagaaccaaaaatccctattaaaaatggggtacagagctaaccaa
agaattctcacttgaggaataccaaatgactgagaaatcacctaaagaaa
tgttcagtatccttttgtcatcagggaaaatgcaaatcaaacaaccctga
gatttccacctccacacagtcagaatgacttagatcaaaactcaggtgac
agcagatgctgttcgaggatgtggagaaaagaggtggattacaaacttgg
ttacaccacctctggaggtcagtctggccagttttctcagaaaatttgac
atacgtctactgagatcagcttaaccacttcctgagcatgatcccaggaa
agagtatttttcaaacacccaatttgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4356889_4357413
seq2: B6Ng01-337B01.b_44_591 (reverse)

seq1  AAATTTTTGAGTGGG-AAGGGAAATTAGAATTGGAA--GAAAGGAAATTA  47
      || ||||| |||||| |||||||| | ||| |||||   |||||||||| 
seq2  AATTTTTTAAGTGGGAAAGGGAAAATTGAAATGGAAAGAAAAGGAAATTT  50

seq1  GAG-TTGATA-TCAAAAATTG-TTTTGCT-CCATTTCTGCCTGAAGCAGA  93
      ||| |||| | |||||||||| ||||||| || ||||| |||||||||||
seq2  GAGTTTGAAATTCAAAAATTGTTTTTGCTCCCTTTTCTCCCTGAAGCAGA  100

seq1  GACCACACCAT-GGGACAAAATTCTGCTAGC-TCAAAGTGAC-TAGGATT  140
      | ||||||| | ||| ||||||| || |||| |||||||||| |||||||
seq2  GCCCACACCCTGGGGCCAAAATTTTGGTAGCTTCAAAGTGACTTAGGATT  150

seq1  G-AAGTGAAAGTAACT-GGGGTGTAG-CCAGCCCT-GGGTCC-TCAGG-C  184
      | |||  ||||||||| |||| |||| |||||||| |||||| ||||| |
seq2  GAAAGGAAAAGTAACTGGGGGGGTAGCCCAGCCCTGGGGTCCTTCAGGCC  200

seq1  CCTCC-TGC---CTCCCCCCCCCTCACAT-GGGGTGT-GGCCAGG-CCCT  227
      ||||| |||   | ||||||||||||||| ||||||| ||||||| ||||
seq2  CCTCCTTGCCCTCCCCCCCCCCCTCACATGGGGGTGTGGGCCAGGCCCCT  250

seq1  GGTCCTGTTCCTCTCCTGTGACAATTTGTGTTAGAACATCTAGATAAGGC  277
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGTTCCTCTCCTGTGACAATTTGTGTTAGAACATCTAGATAAGGC  300

seq1  AAAGAAATCTCTTCAGGACATGACTGTGACACCCATCTGATGGCATATGG  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATCTCTTCAGGACATGACTGTGACACCCATCTGATGGCATATGG  350

seq1  TTTCTGAAGAATTCATCAGTCATAGGACCAGAGATTTTGAATTTAGGAAA  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAGAATTCATCAGTCATAGGACCAGAGATTTTGAATTTAGGAAA  400

seq1  ACAGAACTTTCGTATGTACCATAAAATAATCTTCTGGCAGTAAAAAAGTT  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTTTCGTATGTACCATAAAATAATCTTCTGGCAGTAAAAAAGTT  450

seq1  GTTCTTTTAAAAACTTGTCATAGGAACTGTTCTGAAAATGTCAGCAGTTC  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTAAAAACTTGTCATAGGAACTGTTCTGAAAATGTCAGCAGTTC  500

seq1  AGAAACAGTGGATGCACAAAGATCAGGAAAGACTTGGGGAAAGAATTC  525
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGTGGATGCACAAAGATCAGGAAAGACTTGGGGAAAGAATTC  548