MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-350H19
Chromosome	5 (Build37)
Map Location	44,956,943 - 45,120,257
singlet/doublet	doublet
Overlap gene	Ldb2, LOC100041481
Upstream gene	C1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5, Bst1, Cd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1, Prom1, LOC100041413, Tapt1, LOC100040717, LOC545747
Downstream gene	LOC100040737, Qdpr, EG624224, Lap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576
Link	Open Mouse BAC browser

Click to get alignment info.

name	C1qtnf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109323 MGI:1925911
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833430A08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:399596 MGI:3026998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730509K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231214 MGI:1924487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242960 MGI:2152883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bst1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12182 MGI:105370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12494 MGI:107474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665989 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665989 MGI:3645078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 62 Proteins

name	EG665994 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665994 MGI:3647603
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040677 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG384179 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384179 MGI:3645663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 6 Proteins

name	Fgfbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14181 MGI:1096350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prom1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19126 MGI:1100886
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041413 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Tapt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231225 MGI:2683537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC545747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 71 ESTs, 94 Proteins pseudo : _no_value

name	Ldb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC100040737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Qdpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110391 MGI:97836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624224 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624224 MGI:3646230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Lap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66988 MGI:1914238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040762 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040762
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Med28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66999 MGI:1914249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630031F12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58227 MGI:2442958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630001P10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319251 MGI:2441755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	1600023N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69788 MGI:1917038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs

name	Lcorl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209707 MGI:2651932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs

name	C1qtnf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098163 GeneID:109323 MGI:1925911
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 7 transcript_id : NM_175425.3

name	4833430A08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802347 GeneID:399596 MGI:3026998
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833430A08 gene transcript_id : NM_001033482.2

name	5730509K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986582 GeneID:231214 MGI:1924487
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730509K17 gene transcript_id : NM_172274.1

name	Fbxl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385003 GeneID:242960 MGI:2152883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 5 transcript_id : NM_178729.3

name	Bst1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288868 GeneID:12182 MGI:105370
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone marrow stromal cell antigen 1 transcript_id : NM_009763.2

name	Cd38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388510 GeneID:12494 MGI:107474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD38 antigen transcript_id : NM_007646.3

name	EG665989 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374723 GeneID:665989 MGI:3645078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 62 Proteins product : predicted gene, EG665989 transcript_id : XM_980747.1

name	EG384179 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253888 GeneID:384179 MGI:3645663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 6 Proteins product : predicted gene, EG384179 transcript_id : XM_357471.5

name	Fgfbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47132511 GeneID:14181 MGI:1096350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor binding protein 1 transcript_id : NM_008009.3

name	Prom1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679478 GeneID:19126 MGI:1100886
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prominin 1 transcript_id : NM_008935.1

name	LOC100041413 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253891 GeneID:100041413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100041413 transcript_id : XM_001477174.1

name	Tapt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143115 GeneID:231225 MGI:2683537
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane anterior posterior transformation 1 transcript_id : NM_173764.3

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642890 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_001077398.1

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642897 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_010698.3

name	LOC100041481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253895 GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100041481 transcript_id : XM_001477199.1

name	LOC100040737 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253868 GeneID:100040737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : hypothetical protein LOC100040737 transcript_id : XM_001475163.1

name	Qdpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312519 GeneID:110391 MGI:97836
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : quinoid dihydropteridine reductase transcript_id : NM_024236.1

name	EG624224 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253870 GeneID:624224 MGI:3646230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG624224 transcript_id : XM_888750.3

name	Lap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388799 GeneID:66988 MGI:1914238
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine aminopeptidase 3 transcript_id : NM_024434.4

name	Med28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579899 GeneID:66999 MGI:1914249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) transcript_id : NM_025895.3

name	9630031F12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849732 GeneID:58227 MGI:2442958
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630031F12 gene transcript_id : NM_021416.2

name	9630001P10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374731 GeneID:319251 MGI:2441755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : RIKEN cDNA 9630001P10 gene transcript_id : XM_981317.1

name	1600023N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253900 GeneID:69788 MGI:1917038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs product : RIKEN cDNA 1600023N17 gene transcript_id : XM_001477325.1

name	Lcorl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802056 GeneID:209707 MGI:2651932
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligand dependent nuclear receptor corepressor-like transcript_id : NM_178142.3

name	LOC100041576 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253902 GeneID:100041576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs product : hypothetical protein LOC100041576 transcript_id : XM_001477438.1

name	4833430A08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702011 GeneID:399596 MGI:3026998
definition	codon_start : 1 product : hypothetical protein LOC399596 protein_id : NP_001028654.1

name	C1qtnf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098164 CCDS:CCDS19262.1 GeneID:109323 MGI:1925911
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006817 - phosphate transport [Evidence IEA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 note : C1q and tumor necrosis factor related protein 5 product : C1q and tumor necrosis factor related protein 7 protein_id : NP_780634.2

name	5730509K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986583 GeneID:231214 MGI:1924487
definition	codon_start : 1 product : hypothetical protein LOC231214 protein_id : NP_758478.1

name	Fbxl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520167 CCDS:CCDS19263.1 GeneID:242960 MGI:2152883
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 5 protein_id : NP_848844.1

name	Bst1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288869 CCDS:CCDS19264.1 GeneID:12182 MGI:105370
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003953 - NAD+ nucleosidase activity [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA] codon_start : 1 note : BP-3 alloantigen product : bone marrow stromal cell antigen 1 protein_id : NP_033893.2

name	Cd38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542362 CCDS:CCDS19265.1 GeneID:12494 MGI:107474
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IMP]; GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IMP] codon_start : 1 product : CD38 antigen protein_id : NP_031672.2

name	EG665989 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374724 GeneID:665989 MGI:3645078
definition	codon_start : 1 product : similar to U-snRNP-associated cyclophilin protein_id : XP_985841.1

name	EG384179 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38080000 GeneID:384179 MGI:3645663
definition	codon_start : 1 product : similar to ribosomal protein L15 protein_id : XP_357471.1

name	Fgfbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47132512 CCDS:CCDS19268.1 GeneID:14181 MGI:1096350
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA] codon_start : 1 product : fibroblast growth factor binding protein 1 protein_id : NP_032035.2

name	Prom1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679479 GeneID:19126 MGI:1100886
definition	GO_component : GO:0005903 - brush border [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005902 - microvillus [Evidence IDA] codon_start : 1 exception : mismatches in translation note : prominin-like 1 product : prominin 1 protein_id : NP_032961.1

name	LOC100041413 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253892 GeneID:100041413
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477224.1

name	Tapt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71143116 CCDS:CCDS19270.1 GeneID:231225 MGI:2683537
definition	codon_start : 1 product : transmembrane anterior posterior transformation 1 protein_id : NP_776125.2

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642898 CCDS:CCDS19271.1 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : LIM domain binding 2 isoform 1 protein_id : NP_034828.3

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642891 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : LIM domain binding 2 isoform 2 protein_id : NP_001070866.1

name	LOC100041481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253896 GeneID:100041481
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477249.1

name	LOC100040737 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253869 GeneID:100040737
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475213.1

name	Qdpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312520 CCDS:CCDS19272.1 GeneID:110391 MGI:97836
definition	GO_function : GO:0004155 - 6,7-dihydropteridine reductase activity [Evidence IEA] GO_process : GO:0006729 - tetrahydrobiopterin biosynthesis [Evidence IEA] codon_start : 1 product : quininoid dihydropteridine reductase protein_id : NP_077198.1

name	EG624224 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253871 GeneID:624224 MGI:3646230
definition	codon_start : 1 product : similar to CLRN2 protein protein_id : XP_893843.3

name	Lap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981147 CCDS:CCDS19274.1 GeneID:66988 MGI:1914238
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004178 - leucyl aminopeptidase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IDA]; GO:0016804 - prolyl aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : peptidase S; peptidase 7 product : leucine aminopeptidase 3 protein_id : NP_077754.2

name	Med28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385388 CCDS:CCDS19275.1 GeneID:66999 MGI:1914249
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : endothelial-derived product : endothelial-derived gene 1 protein_id : NP_080171.1

name	9630031F12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849733 CCDS:CCDS19276.1 GeneID:58227 MGI:2442958
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC58227 protein_id : NP_067391.2

name	9630001P10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374732 GeneID:319251 MGI:2441755
definition	codon_start : 1 product : hypothetical protein LOC319251 protein_id : XP_986411.1

name	1600023N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253901 GeneID:69788 MGI:1917038
definition	codon_start : 1 product : hypothetical protein LOC69788 protein_id : XP_001477375.1

name	Lcorl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30025024 CCDS:CCDS19277.1 GeneID:209707 MGI:2651932
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA] GO_process : GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; transcription factor MLR1; Mblk1-related protein-1 product : Mblk1-related protein-1 isoform 2 protein_id : NP_835278.1

name	LOC100041576 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253903 GeneID:100041576
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477488.1

name	EG665994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665994
definition	number : 1 pseudo : _no_value

name	EG665994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665994
definition	number : 2 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 4 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 3 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 2 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 1 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 3 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 2 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 1 pseudo : _no_value

name	LOC100040762 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040762
definition	number : 2 pseudo : _no_value

name	LOC100040762 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040762
definition	number : 1 pseudo : _no_value

name	LOC545747 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253867 GeneID:545747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 71 ESTs, 94 Proteins product : similar to RAB2, member RAS oncogene family pseudo : _no_value transcript_id : XR_032098.1

clone name	MSMg01-543O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-050M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091C20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-350H19.b	B6Ng01-350H19.g
ACC	GA131140	GA131141
length	1,074	506
definition	B6Ng01-350H19.b	B6Ng01-350H19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(45,119,176 - 45,120,257)	(44,956,943 - 44,957,450)
sequence	gaattcagtgcaaatccctagggctgtgtttgcaaggccactagactgtc tagctatgaccttagctatccctgacaccattggctgtgtgagtcagagg aaaatatcatcatctgtatgattgggtagccaggagatgaactaacatat gtgacttatgttggctattgcctgtcatacagcatgtattcaaaaaattc taattattaatatgtgagcatagaccaaactgaaccaatatgatatagaa gatacaggaagatcaggctcctgggaggaaacatttaacctgagacctaa tagaaaatactggaaggtcttgaagatatcgctcacttaaagcgctgttc caataaccagctgacatgagtcctttccctgacttttcagtttgtttgtt tgtttgtgtttttgtatccatggatgtgcaaagttcactgccagtaagta gactgttctccatgtagtctcaccagtgttaacctgcttacctcggctca gggatatctattgtaaaactaatcattagcatcaggactcagaagcttgg ctctgcatagacagatatactcaagccagtttacccttctttatggtact gctaagtcttcctttgatgttcactatacaaggaagacctcaaagtcatc agctactaaataacagagataagcttggtatggtctctctggggcaatgc caacttttctgaaagctccctggatgtttcttggttgaaacaggcaagtg acaggctgggcagagagactgtattctcgccttgaaactgagaagagctg tggcttccgtcctcccagcctgtgtgagcgaacacacatcccagctccgt gttctatccttagtcacagaggccatgactctcactgaggaaaaggaggc tcagagaacttgagcgctttgctcgccgttttccttagatatactgggtc agttttgtttctttctgttttggcactgaagatgaatatagggtgccgcg tacgctgcgtagtatctacactgagtgcactctgtcctgttgtatatgaa tttaatatgggatgccttcagttt	ttcattgaataggtgcaaacaggtagttagatcccagagaatgtgtctta tcatgtaactgtgggccagtggaatcctatgtaacccgagcagttacacc tgcctattctatcaccaagaatcccttgattccttagctccagagcctct tagcacccacaagagcatggatctccaactactcttgaaagccaatccaa accaaccaaacaaacaaaagatcctgtcctaatctttggcaaaatagaaa agctcaccaatgagccacaaagaccctgaggtctgggtgagtgcagagga agtagaagtagtttttgttcagaattgtttggggttagtgtagagggaca agacacactgcaagctcttctttcttcaggttttaaatccttctatgtaa gcactatgcaaataggaaacatatgggatacattcctttgacttgactca tcaaaatggggtgtgtgtgtgtgtgccctgtgtgtgtgtgtgtgtgtttt gtgtgt
quality values	Open. Hide. 58 39 34 31 62 31 21 47 62 62 47 56 62 62 54 62 46 62 62 62 62 62 62 62 62 62 62 62 62 59 49 29 56 50 46 62 62 62 59 59 59 59 54 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 44 58 58 49 53 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 54 58 58 54 58 58 58 52 58 58 58 58 58 54 58 54 58 58 58 54 54 58 54 58 54 54 58 54 51 54 58 58 58 58 58 52 58 54 58 26 48 58 58 58 46 51 49 47 41 58 51 53 58 58 42 50 43 58 45 50 52 51 58 58 49 47 53 58 51 58 58 58 51 48 58 54 58 58 58 51 39 54 41 51 52 50 48 51 58 54 49 54 28 49 51 58 58 51 49 39 17 41 49 53 52 58 58 50 51 52 46 58 50 48 42 54 58 53 54 58 53 58 51 52 53 58 49 49 50 58 39 39 50 51 54 50 51 54 49 58 53 40 42 41 58 49 38 53 54 50 53 49 52 51 49 19 43 37 50 32 39 53 32 39 34 51 40 54 46 54 50 52 49 47 45 54 51 38 40 49 38 34 34 50 51 41 47 32 53 42 54 46 38 51 38 54 41 40 54 49 53 53 44 38 32 33 46 27 32 48 45 52 42 39 21 33 23 54 27 52 45 54 54 39 45 34 54 26 42 31 33 21 39 54 26 36 40 42 37 37 39 45 32 32 32 28 32 37 51 31 27 32 34 47 18 41 33 28 53 24 32 42 45 32 47 31 32 22 14 15 46 31 24 29 47 29 29 47 32 21 28 43 32 30 51 31 51 31 38 38 18 32 21 42 35 30 30 30 28 33 16 37 37 46 26 31 31 41 43 28 29 24 13 42 36 19 32 32 31 30 25 33 31 42 36 33 21 32 26 27 31 31 46 11 42 17 31 25 34 42 34 17 42 29 32 30 34 32 32 31 37 16 24 33 46 46 27 10 18 26 13 15 14 34 32 23 19 34 10 29 31 31 30 28 30 31 20 37 31 27 33 47 30 30 33 33 38 14 23 19 20 26 47 48 37 26 30 14 24 37 11 36 22 27 31 25 31 17 22 43 11 13 32 32 18 32 44 44 14 11 10 29 26 17 14 31 22 9 6 16 7 43 43 20 23 15 14 15 27 32 33 19 9 43 17 18 10 19 8 18 19 24 10 16 43 25 7 32 25 27 14 16 21 13 28 21 18 31 27 24 15 11 16 31 15 13 34 6 21 20 21 22 16 26 24 20 9 6 16 27 6 13 21 19 14 11 20 24 14 15 17 3 3 3 4 4 6 12 15 18 16 15 14 20 34 15 22 21 6 6 26 29 47 27 9 9 21 8 8 24 14 23 11 7 17 25 22	Open. Hide. 62 56 44 44 38 49 49 37 38 59 59 62 59 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 34 62 62 62 62 62 47 62 62 62 54 62 62 62 62 62 58 58 58 58 58 58 58 58 46 58 58 58 58 58 58 58 58 58 46 34 34 36 9 7 6 5 5 4 9 41 31 31 31 33 41 41 47 25 46 18 33 13 22 22 17 16 19 9 9 9 10 7 10 12 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_45119176_45120257
seq2: B6Ng01-350H19.b_48_1121 (reverse)

seq1  AAACTGGAAAGCATCCCCATATTTAAATCATATACAACCAGGACAGAGTG  50
      ||||| ||| |||| |||||||| || |||||||||| ||||||||||||
seq2  AAACT-GAAGGCAT-CCCATATTAAATTCATATACAA-CAGGACAGAGTG  47

seq1  CCACTCAGTGTAGATTACTTACGCAGCGTACGCGGCACCCTATATTCATC  100
       ||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  -CACTCAGTGTAGA-TAC-TACGCAGCGTACGCGGCACCCTATATTCATC  94

seq1  CTCAGTGCCAAAACAAGAAAGAAAACAAAAACTGA-CCAGTATATCTAAG  149
       ||||||||||||| |||||||||   |||||||| ||||||||||||||
seq2  TTCAGTGCCAAAAC-AGAAAGAAA--CAAAACTGACCCAGTATATCTAAG  141

seq1  GAAAACGGCGAGCAAAGCGCTCAAGTTCTCTGAGCCTCCTTTTCCTCAGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGGCGAGCAAAGCGCTCAAGTTCTCTGAGCCTCCTTTTCCTCAGT  191

seq1  GAGAGTCATGGCCTCTGTGACTAAGGATAGAACACGGAGCTGGGATGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCATGGCCTCTGTGACTAAGGATAGAACACGGAGCTGGGATGTGT  241

seq1  GTTCGCTCACACAGGCTGGGAGGACGGAAGCCACAGCTCTTCTCAGTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCTCACACAGGCTGGGAGGACGGAAGCCACAGCTCTTCTCAGTTTC  291

seq1  AAGGCGAGAATACAGTCTCTCTGCCCAGCCTGTCACTTGCCTGTTTCAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGAGAATACAGTCTCTCTGCCCAGCCTGTCACTTGCCTGTTTCAAC  341

seq1  CAAGAAACATCCAGGGAGCTTTCAGAAAAGTTGGCATTGCCCCAGAGAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACATCCAGGGAGCTTTCAGAAAAGTTGGCATTGCCCCAGAGAGA  391

seq1  CCATACCAAGCTTATCTCTGTTATTTAGTAGCTGATGACTTTGAGGTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCAAGCTTATCTCTGTTATTTAGTAGCTGATGACTTTGAGGTCTT  441

seq1  CCTTGTATAGTGAACATCAAAGGAAGACTTAGCAGTACCATAAAGAAGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTATAGTGAACATCAAAGGAAGACTTAGCAGTACCATAAAGAAGGG  491

seq1  TAAACTGGCTTGAGTATATCTGTCTATGCAGAGCCAAGCTTCTGAGTCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGGCTTGAGTATATCTGTCTATGCAGAGCCAAGCTTCTGAGTCCT  541

seq1  GATGCTAATGATTAGTTTTACAATAGATATCCCTGAGCCGAGGTAAGCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAATGATTAGTTTTACAATAGATATCCCTGAGCCGAGGTAAGCAG  591

seq1  GTTAACACTGGTGAGACTACATGGAGAACAGTCTACTTACTGGCAGTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACACTGGTGAGACTACATGGAGAACAGTCTACTTACTGGCAGTGAA  641

seq1  CTTTGCACATCCATGGATACAAAAACACAAACAAACAAACAAACTGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACATCCATGGATACAAAAACACAAACAAACAAACAAACTGAAAA  691

seq1  GTCAGGGAAAGGACTCATGTCAGCTGGTTATTGGAACAGCGCTTTAAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGAAAGGACTCATGTCAGCTGGTTATTGGAACAGCGCTTTAAGTG  741

seq1  AGCGATATCTTCAAGACCTTCCAGTATTTTCTATTAGGTCTCAGGTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATATCTTCAAGACCTTCCAGTATTTTCTATTAGGTCTCAGGTTAAA  791

seq1  TGTTTCCTCCCAGGAGCCTGATCTTCCTGTATCTTCTATATCATATTGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCCCAGGAGCCTGATCTTCCTGTATCTTCTATATCATATTGGT  841

seq1  TCAGTTTGGTCTATGCTCACATATTAATAATTAGAATTTTTTGAATACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGGTCTATGCTCACATATTAATAATTAGAATTTTTTGAATACAT  891

seq1  GCTGTATGACAGGCAATAGCCAACATAAGTCACATATGTTAGTTCATCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGACAGGCAATAGCCAACATAAGTCACATATGTTAGTTCATCTC  941

seq1  CTGGCTACCCAATCATACAGATGATGATATTTTCCTCTGACTCACACAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTACCCAATCATACAGATGATGATATTTTCCTCTGACTCACACAGC  991

seq1  CAATGGTGTCAGGGATAGCTAAGGTCATAGCTAGACAGTCTAGTGGCCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGTCAGGGATAGCTAAGGTCATAGCTAGACAGTCTAGTGGCCTT  1041

seq1  GCAAACACAGCCCTAGGGATTTGCACTGAATTC  1082
      |||||||||||||||||||||||||||||||||
seq2  GCAAACACAGCCCTAGGGATTTGCACTGAATTC  1074

seq1: chr5_44956943_44957450
seq2: B6Ng01-350H19.g_66_577

seq1  GAATTCTTCATTGAATAGGTGCAAACAGGTAGTTAGATCCCAGAGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTGAATAGGTGCAAACAGGTAGTTAGATCCCAGAGAATGT  50

seq1  GTCTTATCATGTAACTGTGGGCCAGTGGAATCCTATGTAACCCGAGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATCATGTAACTGTGGGCCAGTGGAATCCTATGTAACCCGAGCAGT  100

seq1  TACACCTGCCTATTCTATCACCAAGAATCCCTTGATTCCTTAGCTCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTGCCTATTCTATCACCAAGAATCCCTTGATTCCTTAGCTCCAGA  150

seq1  GCCTCTTAGCACCCACAAGAGCATGGATCTCCAACTACTCTTGAAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTAGCACCCACAAGAGCATGGATCTCCAACTACTCTTGAAAGCCA  200

seq1  ATCCAAACCAACCAAACAAACAAAAGATCCTGTCCTAATCTTTGGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAACCAACCAAACAAACAAAAGATCCTGTCCTAATCTTTGGCAAAA  250

seq1  TAGAAAAGCTCACCAATGAGCCACAAAGACCCTGAGGTCTGGGTGAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGCTCACCAATGAGCCACAAAGACCCTGAGGTCTGGGTGAGTGC  300

seq1  AGAGGAAGTAGAAGTAGTTTTTGTTCAGAATTGTTTGGGGTTAGTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTAGAAGTAGTTTTTGTTCAGAATTGTTTGGGGTTAGTGTAGA  350

seq1  GGGACAAGACACACTGCAAGCTCTTCTTTCTTCAGGTTTTAAATCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAGACACACTGCAAGCTCTTCTTTCTTCAGGTTTTAAATCCTTCT  400

seq1  ATGTAAGCACTATGCAAATAGGAAACATATGGGATACATTCCTTTGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGCACTATGCAAATAGGAAACATATGGGATACATTCCTTTGACTT  450

seq1  GACTCATCAAAATGGGGTGTGTGTGTGTGTG---TGTGTGTGTGTGTGTG  497
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  GACTCATCAAAATGGGGTGTGTGTGTGTGTGCCCTGTGTGTGTGTGTGTG  500

seq1  TG-TGTGTGTGT  508
      || | |||||||
seq2  TGTTTTGTGTGT  512

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information