GGCTCCTATTCAAGAGATCCGCGGAATTCATCTGCAGCAATGAGACCACA
ATAATGTTAACTAAACCTCTCTCAACAGTTCCGGACTATGGAAACAAACC
CAGGAAATACATGGTCTCCTAGTGGCCAAAAGTTTCCAGTGGCTCAGCTC
CTTTCTGTATGTCTGTTGATGCTTATAGATAATTTGCAAATTGTGTTGTC
AACACAACATTTAATCTGCTCTTAGCAGCTCATAAACAACACTTTGATTA
ATTGTTTCGGTTGGTGTCTTCTGGAAAAGATTTACAGGGCTCTGTTTATG
TGGATGAAAAATAGAGACAACCTTCTAGGACAAGGGGAAGGGAAATGAAA
AGAATTGCCTTTTTGACTGACATTAAGATGTGCTTTTAAATCAGCGTTTT
ACATGCTTGTTTCCAGAAGATGAGAATTTCTTCAACTGGCAAGAGAGGAG
CTCAATGTTGAGGTGGAGTATCTCAGGAGAGGCAAAGGCTGATTGTCAGT
GCAAGAGATCTCTGTGGGAGAGAAGGTCTAGTCAAGCCTGAGGCAGAGGA
TGACTTTCTAAGTAGCCAATTATTTTCAGAACTTGCTTGGACAATTATGT
TCATAGAATCTGCTGGCATTATTCTCTGGGAACCACTGAACCATCATGGT
AAT

GGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCACATTCCACACTAAGGCAGCAGATTACCAAACAGAAAACTCACTT
GGCCTGACGCACATAGCCTAAATCCCCGAGGCAGCCCGTGAAAACTCATT
TGAGTAAAGAAAACATCGTATTTCCTACGCTTCACACCTAAAATTGGAAA
TCTGGAATCAAAGACTTCCAATAAGCCATACTAATTATCTTTAGCTATTT
GTTTTCACTTTTTCCCAGGGCTGGCAACCAAAGCATAGGACTGCAATCAG
GATCAAGAACACCTGCTTGGCCTCCAGTCAAATTCAACCAGCTACCCATG
TCTGTACATATTTCCTTACCTTCCACACGCCTAACAGTGTCCTCTGAACC
CAGCAATATGTACCAATGCGTCACCTATTCCCCCACACTCCGAACTAGAG
TACGCCTCTAAACTCAATTTCACCTCGCTTTCTCCCTTTCCTTCCCTTAC
ACTTATATTCCGCAGTTCCCGCCCTCATACCCTTTTCCTTCCACCCCCAT
CTTCTTCTATCCTCCCCCCCTCCCCCCTACATACCTAATCCTCCATTCTC
TACCCCCCCCCTCCTTTCTCACTCCCTTTATTCTCCCCCCCTCACCCTCC
TCTTCTCTCCGCATTTCCCTTTCCCCTTCTTCCGCTTCCCCTTTCTTCTC
CTCCCCTTTATCTTATCTCCCC

Query= MSMg01no045_i03.b1 MSMg01no045_i03.b1 CHROMAT_FILE:
MSMg01no045_i03.b1 PHD_FILE: MSMg01no045_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:28 2005
         (471 letters)



>mm_chr5_51006365_51007236
          Length = 872

 Score =  890 bits (460), Expect = 0.0
 Identities = 466/468 (99%), Gaps = 1/468 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcatctgcagcaatgagaccacaa-taatgttaactaaacctctctcaacagttc 62
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatctgcagcaatgagaccacaaataatgttaactaaacctctctcaacagttc 263

                                                                       
Query: 63  cggactatggaaacaaacccaggaaatacatggtctcctagtggccaaaagtttccagtg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cggactatggaaacaaacccaggaaatacatggtctcctagtggccaaaagtttccagtg 323

                                                                       
Query: 123 gctcagctcctttctgtatgtctgttgatgcttatagataatttgcaaattgtgttgtca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctcagctcctttctgtatgtctgttgatgcttatagataatttgcaaattgtgttgtca 383

                                                                       
Query: 183 acacaacatttaatctgctcttagcagctcataaacaacactttgattaattgtttcggt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acacaacatttaatctgctcttagcagctcataaacaacactttgattaattgtttcggt 443

                                                                       
Query: 243 tggtgtcttctggaaaagatttacagggctctgtttatgtggatgaaaaatagagacaac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggtgtcttctggaaaagatttacagggctctgtttatgtggatgaaaaatagagacaac 503

                                                                       
Query: 303 cttctaggacaaggggaagggaaatgaaaagaattgcctttttgactgacattaagatgt 362
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 cttctaggacaaggggaagggaaatgaaaggaattgcctttttgactgacattaagatgt 563

                                                                       
Query: 363 gcttttaaatcagcgttttacatgcttgtttccagaagatgagaatttcttcaactggca 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcttttaaatcagcgttttacatgcttgtttccagaagatgagaatttcttcaactggca 623

                                                           
Query: 423 agagaggagctcaatgttgaggtggagtatctcaggagaggcaaaggc 470
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agagaggagctcaatgttgaggtggagtatctcaggagaggcaaaggc 671


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space:   397382
Effective search space used:   397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)